Array 1 144038-137832 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWZT01000013.1 Pseudobacteriovorax antillogorgiicola strain RKEM611, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 144037 28 100.0 32 ............................ CTGTTGCTTCAGAGTGGGGGAGCTGTGAGAGC 143977 28 100.0 32 ............................ TTACTTAGCTCCTGCGGCGGCGGGAGCAGCTC 143917 28 100.0 32 ............................ AAGGCACGGGTAAGTTAAGGCCTGTTAGCGAT 143857 28 100.0 32 ............................ CAATCAGAGTCATAATCGATACTTTCATCATA 143797 28 100.0 32 ............................ TAATGGGGTTCGAAGCGTTCAAACTAATGTTC 143737 28 100.0 32 ............................ ATATGCGGGTTAATGACTTGGTAAAGTTTTCC 143677 28 100.0 32 ............................ AGAGCAAATACACTGCCGAACTCTACTCCGCC 143617 28 100.0 32 ............................ TACAACAACCGCCTGCTGAAAATCGCCGTGAC 143557 28 100.0 32 ............................ TATTCCCAAGGGCCGTAAAGGCTCCTCAAACC 143497 28 100.0 32 ............................ ATAACCACGTTTTCCAAAAGGGAAAGAGTTGC 143437 28 100.0 32 ............................ CCCATGGCGCTAGCTATGGCATTACCTTCGCC 143377 28 100.0 32 ............................ TCTGGGTTGTTTAGAACAAAATTAGCAAACCG 143317 28 100.0 32 ............................ TCTTGAAAGCGGTTATCATGGGCCCCACTCCT 143257 28 100.0 32 ............................ TTGATAATCTTTCCGTTGTTCTCAATGAGGAT 143197 28 100.0 32 ............................ TCTTCTGGGGTTATCCTTTCAGCGACAGCTAA 143137 28 100.0 32 ............................ AGACAACCCAGCACACCCACACCACACCTAAC 143077 28 100.0 32 ............................ TAATGGCAAAATGCGATCCAGCGCGCCATCGA 143017 28 100.0 32 ............................ TGTCTTCGGGCGATAGACTTTTTCGAGAATGT 142957 28 96.4 32 ........T................... ATATCTAGCTTTTGATCGCCTAAACGACAATG 142897 28 100.0 32 ............................ AAGAGCCGAAAACTGAAACTTTAGCTTGTTAA 142837 28 100.0 32 ............................ AGAAGATACCCTTTAATAGTGTCTTCTTTGGG 142777 28 100.0 32 ............................ TAGGTTGCCGAGGATAATTGCTTTATTTACTG 142717 28 100.0 32 ............................ TAATGGCAAAATGCGATCCAGCGCGCCATCGA 142657 28 100.0 32 ............................ TGTCTTCGGGCGATAGACTTTTTCGAGAATGT 142597 28 100.0 32 ............................ ATATCTAGCTTTTGATCGCCTAAACGACAATG 142537 28 100.0 32 ............................ AAGAGCCGAAAACTGAAACTTTAGCTTGTTAA 142477 28 100.0 32 ............................ AGAAGATACCCTTTAATAGTGTCTTCTTTGGG 142417 28 100.0 32 ............................ TAGGTTGCCGAGGATAATTGCTTTATTTACTG 142357 28 100.0 32 ............................ AAAAGTGGGTCGCGGAGTCTATTACAATGGCT 142297 28 100.0 32 ............................ ATGAGGTATGGACTAATGGAAAAGGGGATCAC 142237 28 100.0 32 ............................ ACATTCGATGAAAATAGGCACGTTCAAAAGAT 142177 28 100.0 32 ............................ TTTTGCAAGAGACGAAATAGCATTCAGTACAA 142117 28 100.0 32 ............................ TAAGCGTTTCATGTTTCCGCGAGAGACCCTAC 142057 28 100.0 32 ............................ CCGTCTGAACGGAGTTTCTGACGAACTTTCTT 141997 28 100.0 33 ............................ TAAAGGCAAGGTATAAAGCGTGAGACACTTAAA 141936 28 100.0 32 ............................ ACCACAACTGCCTGCTGAAAATCGCCGTGACC 141876 28 100.0 32 ............................ TTTTCGTCGGTGAAACGTGAGAACTCATTTTT 141816 28 100.0 32 ............................ CTAGTAAGAGTTCTGATAGTCAATTAGCCGAA 141756 28 100.0 32 ............................ TTGAAGCTGAGAAAAGATTTCAACAGCGCCCG 141696 28 100.0 32 ............................ ACACACTGGAGCATGTGATCCCTATCACCCAT 141636 28 100.0 32 ............................ AAGCTGCCTTTAGGGCCGGAAGCTTGATGTAG 141576 28 100.0 32 ............................ AAGACGGGTCATCTGGAAAGCTAGTTCATCCT 141516 28 100.0 32 ............................ AGGTGGTCTCAAAAAATGTCCAAACGCCCATT 141456 28 100.0 32 ............................ TTGGCTGTTTGCCTCAAGATCCACCCGATCCA 141396 28 100.0 32 ............................ CCCAGCCAAGCAGCGTCTACGCTTGAGGTTTC 141336 28 100.0 32 ............................ TCAGCTTGAAACAGATCCAAATTCACCATATT 141276 28 100.0 32 ............................ CACGCAGCCACATTGGACGACCGCCTTTGAGC 141216 28 100.0 32 ............................ CACAAGGCAACTATCAGGGAGTGGCCTATGCC 141156 28 100.0 32 ............................ GTTCTCGATGACACCAATTGAAGCTGCCTTAT 141096 28 100.0 32 ............................ TACAAGGACCTTACCAGATGACGGATCGATGA 141036 28 100.0 32 ............................ AAGACCCTTGGCAGCATTCTCTAGAGTAACTG 140976 28 100.0 32 ............................ TCCTAGCTGCTTCAGTCTTAGCTCTAATAGAA 140916 28 100.0 32 ............................ ATCTCAGTGTTGGCTGAAAAGGCAATGAGCTT 140856 28 100.0 32 ............................ ACCACGACGGCCAAAGATCCTTTAGAACTTTT 140796 28 100.0 32 ............................ TGGCGATTGATGATAGCTTTCAATGGGTAGAT 140736 28 100.0 33 ............................ TGCTTATTCCAGACGACAACTCGGTGCCACTGG 140675 28 100.0 32 ............................ ACTGGCCTAGGTCCTGGGGGAAGGCTTTTCGA 140615 28 100.0 32 ............................ AATAAAGTGTTCAAACTCTTGGTCCGTCGCAC 140555 28 100.0 33 ............................ CACCAGAAAAGTAAGGGAGAGCGTTGATCTACT 140494 28 100.0 32 ............................ TGCCTAGCTATGGTTTCATCTTGAGCCTTAAT 140434 28 100.0 32 ............................ ATCGCGAAGACGAGGAAAAACGAGGCTTAAGT 140374 28 100.0 32 ............................ AAGAGAGTTGAATAAATATAAAGATCGCCCTT 140314 28 100.0 33 ............................ TTTGATCTGCTTAAAATAGCAATCATACTTTCT 140253 28 100.0 32 ............................ GAGAGCGCGTTTCAAGCGAAAGCTAGAAGTCA 140193 28 100.0 32 ............................ ATACTCCGTCAATTACGACTCTGCCATTCACA 140133 28 100.0 32 ............................ ACTGAGGAATAGGAAACTCGCCCAAACAAAAA 140073 28 100.0 32 ............................ ATGCACTTTTAAAGACGGCATACGAGCAGAGA 140013 28 100.0 32 ............................ GCGTTGCTATTGCTTCCGATGAAGAACTTACT 139953 28 100.0 31 ............................ AAACTACGGATGCGCCAACGGTGAAAGGAAT 139894 28 100.0 32 ............................ TTGCAGAGACTAAGATCAAAAGCGAAATGACT 139834 28 96.4 32 ........................A... TAACGAGCAGTATGGTCGAGCTTCTAAACTTC 139774 28 100.0 32 ............................ TATACGGTGGTTCACAAGTCCTTTCAGAGTCT 139714 28 100.0 32 ............................ TTATTCCTAGCTATTGGCTCAAGCTTGATTAC 139654 28 100.0 32 ............................ CCAGAGCGCTCGCAAATCTTTTTTACAGCCAT 139594 28 100.0 32 ............................ TCTAGAACGCGCTGTATGTCTTGCACCATACG 139534 28 100.0 29 ............................ TGCCAGGTCGCTAGCAGTGCCATGTGGCC 139477 28 100.0 32 ............................ CTGAAGGGGAGATGACACGGACTCACTCAAAC 139417 28 100.0 32 ............................ TAACGTCATCACTGTCGATAACTTTGGTCCCA 139357 28 100.0 32 ............................ TAAAGTCGTCGATGGATTTAGGCCACTCTATA 139297 28 100.0 32 ............................ AAAAGCTTTATATATAGCTACTTTCGAAGATA 139237 28 96.4 32 .....T...................... TTATGAAGGGCCGCATGTTCGGCCAGCTCAAC 139177 28 100.0 32 ............................ TTATGAAGGGCCGCATGTTCGGCCAGCTCAAC 139117 28 100.0 32 ............................ AATTTGCTTTTTTTCGCTTTCAGTGTATCTGT 139057 28 100.0 33 ............................ CTAGCGGAACACCTGTTTGCACGCTGTCTATTG 138996 28 100.0 32 ............................ CAGTGGGAGTGGTAAAACTATTGGATCACTAT 138936 28 100.0 32 ............................ ACTGACAAGCTAATGTTTTGGCGTCATCCATT 138876 28 100.0 32 ............................ TACTTCGCGGATTGTCTGTTCGTCGTTGTCAA 138816 28 100.0 32 ............................ ATTCTCCTTGATTATACAACTTATTTTTTCTC 138756 28 100.0 32 ............................ TGCCTAGCTATGGTTTCATCTTGAGCCTTAAT 138696 28 100.0 32 ............................ ATCGCGAAGACGAGGAAAAACGAGGCTTAAGT 138636 28 100.0 32 ............................ AAGAGAGTTGAATAAATATAAAGGCCGCCCTT 138576 28 85.7 30 ........................ATTT GATCTGCTTAAAATAGCAATCATACTTTCT 138518 28 100.0 32 ............................ GAGAGCGCGTTTCAAGCGAAAGCTAGAAGTCA 138458 28 100.0 32 ............................ ATACTCCGTCAATTACGACTCTGCCATTCACA 138398 28 100.0 32 ............................ TTGAAAGAACAGCTTGCTTTAACCACTCTCGA 138338 28 100.0 32 ............................ TAGCTGTTCTCGCAGCTTTTGAATTTCCTCTT 138278 28 100.0 32 ............................ TTTGAAAGTGTCGCCTATTATGCTGGTTCTTC 138218 28 100.0 32 ............................ CACAAGCCGCATTAACAACTTCATCTATCAGT 138158 28 100.0 32 ............................ AAAATGAAACATTTCCTACACTTTGTTGCATT 138098 27 89.3 32 .....A.-.....G.............. ATCAGGTATTACATTGTCGGATATCTTGCCAT 138039 28 100.0 32 ............................ GGTGAGTGGAAGCGTTACTCAGTTCGCTTAAC 137979 28 100.0 32 ............................ TACCCTTGCCCGCGTAAATGCAATGTACCCCC 137919 28 100.0 32 ............................ CATTAGTGATGATCCTTATCGTGTTTGGGTTC 137859 28 96.4 0 .........G.................. | ========== ====== ====== ====== ============================ ================================= ================== 104 28 99.6 32 GTTCCCGGCCGAGCAGGCCGCTTAGAAA # Left flank : CTTAAAGAAGTGGCTTATTAGGCTTCGAGACTACGTTCATATCAGGCGAGCTAGAATAGTCCCGTCAAATATTGAGCATGTATGTTTTGTTCGGAAGAACAATAAAAAAAGTATAGAAAAACTAGCAAGGCGAGCATCTAAAAGACATGGTATCGATTTTGATACCGCTATCAAGGAGATTCGTCAGGGTGAACAGATGGGTCAGCCACGGCTTCCGCGAATCGAGTATGAGAGCCTTACTAATCACCATGTCTTCCCAATTTTCATTGAAAAGAACAAGCGCGATGGGCCCCAAGAGGGAGTGTTTAGCGCTTATGGACTAAGTAGTCAATCTACCGTACCGGACTTTCCATAATCATCGATTTTAGACCTTCTTTTTCTCCTAGTTTCATAACATATTGTTTTTATTGATTTATATGTTCACGTCAGAAAAGAAGGTCTTTAGCAGATATCCAGCAAAAGATCTTTGAAAATCGCATACATAGGTCTATTGTACCAGA # Right flank : TTGGCGCAAAACAATCCGTTCTTGGCAGGAGAACCATTTTCATGGCGTTCTTTGCACCTCTCGGCGGTGTTGAAAACCTGACAGGTCTACTAACATACTAGAGGAAAGAATATTCCCTTTAGAGTTGGGCAGGATTATTAAAGGGGTTCATGTAACTGTCTTGATTATCTACATCGGTAGCTTGCTTTGGAGCTACCTATAAGGGATCGTCTCATCAAGGGCTGTTCATGTGCCGCTGCAATGAAGACAGTCTTTATAGGCAAAAATAAAAAGTGGCTAGTAGTTGAACACCCCAAGGTACCAGCCTTAGAGTGTCATGGCGAGATGAATCGTTTCACTAGAGTCTGACAAAGGTATGCACGAAGTTTGACGAGGAATCAAACCACGGGACGTATAGTTCCCGGAGTACTAAGATCTGATCATCACGGCGATTGAGTATCCTATAGGTCCGAGACTGAAAAAGCTCGCAGTCGATCTCCTCACTTAAACAAAGCTTAGCA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCCGGCCGAGCAGGCCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.20,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //