Array 1 35822-38963 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAPV010000009.1 Arcanobacterium phocae strain APH127 NODE_9_length_55769_cov_89.938679, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 35822 29 100.0 33 ............................. ATGATTTTAATATCGATATACCAATTCGTACTT 35884 29 100.0 32 ............................. TTCCGCAACGCCGTTGAGGAAGCACACATCAC 35945 29 100.0 32 ............................. CAGATACCTACACCGCACGTCGAGCGGATAGA 36006 29 100.0 32 ............................. CTGAATACGAAAATAGCCGGCGTGTTAAACCG 36067 29 100.0 32 ............................. GGCGTAATCAATTTCTTTGTAAATTCCTCAGC 36128 29 100.0 32 ............................. AAATCTTCTTCACAGGGGGACTTCCCTGCTGG 36189 29 100.0 32 ............................. GCCATGCGTGCGTTGCGAGCGTTCCTATTAGC 36250 29 100.0 32 ............................. ATTGATTGTTAATGCGTCATTGAAGCGTGCAT 36311 29 100.0 32 ............................. AAGCTATTGCATTATTTACGAAGTTTGCCATT 36372 29 100.0 32 ............................. TGAATACTGAATCAACCCGGCGTTCAACGCTC 36433 29 100.0 32 ............................. TGATCGAAGATTTCTATGAGGTTCAAGCGAAT 36494 29 100.0 32 ............................. ACTGAGAAACAACCCCAGCCCCAGGAACCGTT 36555 29 100.0 33 ............................. AGTGGCTCCGTTGAGGAGTAGTACGAAATGATT 36617 29 100.0 32 ............................. CGTCTAAGTTGCCCCTTAGGCGGTCATCTATA 36678 29 93.1 32 ..........................G.G GTGATGGGTTCGCCACTGGCCTTCTACCAGTA 36739 29 100.0 32 ............................. ATTTTCGGACATAACTTCTTCTCACCTACCGC 36800 29 100.0 32 ............................. GATTTGTGCCCAGTCGTCGAGGTTCTCCCCGA 36861 29 100.0 32 ............................. GACATCGGAAAGGGTTGGATCCCATGAGCGCT 36922 29 100.0 32 ............................. GTTTTGACGTTCCATGGAATCCCGCCATTTGC 36983 29 100.0 32 ............................. AATTTCGAGCTATGCGATCGGCAGGAACGCTG 37044 29 100.0 32 ............................. AGGCTCTACGAGATAGCGGAAGGAGTTGGGAA 37105 29 100.0 32 ............................. GGTTCGTCCTCTATCCTGCCTGCACTACTTTT 37166 29 100.0 32 ............................. GAAAAGATCATTGAAAACCGTCCACGGCTACA 37227 29 100.0 32 ............................. TGTTCCAGTAATAAAGCTAGCTATTTCTTTGA 37288 29 100.0 32 ............................. AGCTTATATCGAGAGTCTAACTGGCGAGAACC 37349 29 100.0 32 ............................. GAATGCGTAAGGTTTTCGAAGTGTAGTCATAC 37410 29 100.0 32 ............................. GACTTGGAAGGTGCTATCTCGCCGACCTTCCT 37471 29 96.6 33 ............................A CCAAAAGCTACTCGGAAGGCGCGTTCTTCGGGG 37533 29 100.0 32 ............................. CTCGGCCTGGGCTGGTGTTATAGTTTTTTCAT 37594 29 96.6 32 ............................T TAGTGCAGTACCGGAGTTGGCGTACACGGATG 37655 29 100.0 32 ............................. GAGATACCGTTCACGAAACCACGGATAACGTT 37716 29 100.0 32 ............................. CGTTATCAACATCGAAAATCTGGCTAGACTCC 37777 29 100.0 32 ............................. TTTTGGGTATAAAAATATCCCCTGCGCTTTTC 37838 29 100.0 32 ............................. ATACTGTAAATTCCTCCTGTCCACTCTCCCGG 37899 29 100.0 32 ............................. TGGTGTGCCTGTCGAGTTACTTGCTGGACCTC 37960 29 100.0 32 ............................. ATCAGCGAATATTCCCGCCCGTCCAGTGACGG 38021 29 100.0 32 ............................. TTGCGAGTCTTGATTGTAGCGCCGATAATCGT 38082 29 100.0 32 ............................. TATATCCGAAGGGCTGGATTGTCAAGAACGCT 38143 29 100.0 32 ............................. GAGCCACCCCAAGACAACCGTTAAAGAATCCA 38204 29 100.0 32 ............................. TGCTTTGGTGCGCGCTGCTGAGCTGATGGCGC 38265 29 100.0 32 ............................. ACAGCTTCGAGAATGGCAAGAAGCTGGTCGCC 38326 29 100.0 32 ............................. TTAGAAGAACGCACACTAACCGCGCGTGCCGT 38387 29 100.0 32 ............................. ACAGCTTCGAGAATGGCAAGAAGCTGGTCGCC 38448 29 100.0 31 ............................. TACACGGGGGAGCTTTTTGAAGCTACTCCAG 38508 29 100.0 32 ............................. AAGGTCTAATCCTTCCGCCTGGTCAAGAGGGT 38569 29 89.7 32 ..........................CTT TCTCGCATTGCTGCAAGATTTGCTGTACTTGT 38630 29 100.0 32 ............................. AGGAGGTGCGCTAAAAATCGAGCTAGTAGATG 38691 29 100.0 32 ............................. ACATCATGGTATGCCCTCCAAACCGTTGAAGA 38752 29 100.0 32 ............................. TTGCTGTGTAGGACGAAATCGTTGAAATGGTT 38813 29 100.0 32 ............................. GGTGGAATTAGCTGTGCGTCTTGCACTTTCGC 38874 29 96.6 32 ............................G TGCTCGCGGACATGACGTGACGCGCACCGTCG 38935 29 96.6 0 ........................C.... | ========== ====== ====== ====== ============================= ================================= ================== 52 29 99.4 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TAGACGCGATTTACGGAGGCAAATTCATAGCAAGCATATATTGGAAGACATGCTTGGCACGCTCATGGAGATCTTAGAACCACACCTGCCGAATCGTGATGATGATCGATTGATCAATGATAATGGTGAAGTTTCTGGGCACGTACAATACGGAAAAGATGATGAGTGATGTTTGCAGTCTTAACAATATCTGCAGTTCCCGAGCATCTTCATGGCTATGTAACCCGATTTCTCACTGAGGTTGAAAGTGGGGTTTACGTCGGAAATATTTCTCGGAACGTGCGTGAACGCCTATGGGAACGTGTGAGTAGTACGCTTGACGAAGGAACTTCTACTATGATTTATAGCGACCCGCGACAAGAACAAGGATTCTCGATGCTCACTGCAGGAAAAAATTCACGAAAAGTATTGGACTTAGACGGTCTAACCGTTGTGTCCATGCGTCCTGGACGTGGAGAATCCAAAATTCGAGATCGTTGAAAATAAAGGCTTTCGTTAGT # Right flank : CAAAATTTGAAGGCGATTCAAAGATGGGCGCTCAAGTGATCGGAACGATCATGATCAAGGTAGCGCTTCTTATTGTCGCTATTCAAAATGTAGATCTAATTCTTAAAGCTATTAACGAAGCTGGCGAAACACTTATTAACGGGCTGAAAAAGTATGCAACAGTCATACAGGCTAACCCTGTCAATATCGGTGATCTTGATATGGATACTCTAGATATGATCGGCGCAATGATCATTCTATTCTTGCCCTGGCTGATTTCAATGCTTGGCGGCATCGTCGTAAAAATCGTTGTACTCTTGCGATTTGCTGAGATATACATACTTTCTGCTGGGGCAACTCTACCGTTAGCATTCTTGGGTCATACCGACACAAAATAAATTTCGATCGGATACCTCAAGAAGTATGCAACGGCCATGCTTCACGGTTTCACGATCATCCTTGTCCTGATCATCTTTGCCAAATTCCAAGGAGCCGGTACAGACCTAGGAGAAAACCCAACA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //