Array 1 1739-41 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZOO010000013.1 Streptococcus sanguinis strain ST499 Ssanguinis_ST499_NinaOddballs_Sia_NO_13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================================== ================== 1738 29 89.7 43 .......C....T..G............. GCGTATTCAATCAACATTGCCTTAAATTCTGCTTCTGTAAGCC 1666 29 93.1 43 .......G......G.............. TCACGGACAGCGTCCCTAGGGTATTTCACCGATGTGTAAGAAA 1594 29 89.7 43 .......CT......G............. TGGCAAGCTCTCTTTACTAAACAAGTAATCTTGAGGTAAGAGC 1522 29 82.8 43 T....T.C......GG............. GTTGGGTTTTCAGGAAGAATGAATGTTACTTTTTCAGTAAGCC 1450 29 82.8 43 .....T.C.......G.......AA.... TGTCATTTGGTGACCTCCTTGCTTGTGCTTGGCTTGGTAATAC 1378 29 79.3 44 ...T.A.C......CG....T........ TCTTTCCTGTAATTGATAAGAGCAACCCAATGGATGGTAATAAC 1305 29 89.7 45 ........T.....C.....T........ GGACTCGCACTGGTTCCGATGGCTGGAGTCGGACTAAGTTAGAAA 1231 29 96.6 46 .......C..................... TCAATAAAATCATTCATCAATGCTTTCTTGACTACCGGGTAGGAAC 1156 29 100.0 47 ............................. CATTATAACGGCTGGCATGGTGATTGAGATGAGTAATCAGTAGGAAC 1080 29 100.0 42 ............................. TCAGACCAGATTCAATTCCAGGTCGCCCATCTTGGTAAGACC 1009 29 86.2 42 .....T.C.......G............T TAACCATGACTATCCTGTAAAATTCTGGCCGATAGGTAAGAC 938 29 86.2 43 .....T.CT......G............. ACAACGTGGTAGTTCCAACCTAAAACGGTTTTTTCGTAAGACC 866 29 89.7 43 .......C......GG............. ACAGAGCGAGAATCAGCTTGAAAGTTTTCTAGTGTGTAAGAAA 794 29 86.2 44 .......C....T..T....T........ CATACCGCACAACAAGTTCTCTTAATCCAGTTTTCAGTAAGAAC 721 29 82.8 43 .....T.C.......G..T..G....... GCCGTAGTTCGACTGATAAGTTGTACATTATTCAGTTAAGAAC 649 28 75.9 44 .....T.CG.....CG....T...-.... CCCCATTCTGGCATTTTGAGTGAAAATCATATCATTGTAAGAAC 577 29 86.2 42 ..T....C......GG............. GAGATAGTAGGTAGTAGATTGCTCATTGGTATACGTTAGAAA 506 29 89.7 42 .......C...C...G............. TCTTATTTTCGTCTTATAAGAGGCCTTTCATTTAGTAAGACA 435 29 86.2 44 .......G......GG....T........ ATAAAATAATAATTGTAAAATTAAAATGTTTTACAAGTAAGACA 362 29 89.7 45 .......C......CG............. ACAAAAAGGGGGAATGATAAGCAGAATAAAAAATACTGTAAGAAG 288 29 82.8 42 ....G..C.....A.G....T........ GTTTGCTTGTTAGTCTCTACGTTAAGCAGGTTTCGTAAGAAC 217 29 82.8 45 .....T.C......CT....T........ CCAATCAAGCCATTATTGGTAGTATTTGTTCCATCTGGTAACAAT 143 29 79.3 45 .....T.C......GG....T...A.... GGAAATTTTGTCCTTCCTTTAGGTCTTCCTGGCTTTCGTAAGACC 69 29 82.8 0 T....T.C.......G.....G....... | ========== ====== ====== ====== ============================= =============================================== ================== 24 29 87.1 44 CCCCAGTTACCTCGAAAGGGGACGGAAAC # Left flank : GTTACCTCGGTAGGGGACGGAAACAAGCTTGTTGTTTGATACGAGAGATCTCATCCTGTAAGAA # Right flank : CAAAATGAACGCTCCGATTCCTTTCAGAATAGCTGGTAACA # Questionable array : NO Score: 4.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.35, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.13, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCCAGTTACCTCGAAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [35-28] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //