Array 1 83856-90009 **** Predicted by CRISPRDetect 2.4 *** >NZ_VLKE01000002.1 Micromonospora olivasterospora strain DSM 43868 JD77DRAFT_unitig_1_quiver.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 83856 37 100.0 39 ..................................... TCGACGCGCAAGGCATCGACCCTGCGGCGGAGGGCCGGC 83932 37 100.0 37 ..................................... GTCGCCCTGGCGCTCATGCTCTTCAGCCAGATCGCCG 84006 37 100.0 38 ..................................... CGGCCGATCAGGCCGGAGTACGGCCCGGCCGGGTTGCG 84081 37 100.0 38 ..................................... GCCGGCGCGCTCGATCGGCGCGGCCGGCAGGTCGAACA 84156 37 100.0 37 ..................................... GCGTTCGCCCCCGCGACCAAGGCCCAGGCCAAGGCTC 84230 37 100.0 37 ..................................... CTCGGGAACTGCTCGCTTCGGGACGCGACCGCGCCAA 84304 37 100.0 37 ..................................... TCGACGACGATCGCCCGGTACCGGTGGTGCTCGGCGA 84378 37 100.0 37 ..................................... GAGGGCGTGGCGATCGGCAACGTCCTCCGCGCTCACC 84452 37 100.0 38 ..................................... TTCATCCTCGCTGCGGGCGTGTGGCGCCCCGACAGCTG 84527 37 100.0 39 ..................................... GCTGTGTGATGTTCGCGTAGGTGACGCTGCTGCCAGGGA 84603 37 100.0 36 ..................................... CTCTGAAGGGAGAGCCACCCCCATGGCCAAGGGAAA 84676 37 100.0 38 ..................................... TGGTCGCTTTCGCACCTCACTCGCTATTCGGGTATGCC 84751 37 100.0 38 ..................................... CCGCTCGTCGAGAGTGGTCGCGTCGCGGGCTGCGGCGG 84826 37 100.0 38 ..................................... TCCTGCTTTCCACTCATGGCCTGCTTCACCTGCGACAG 84901 37 100.0 38 ..................................... CTCGTGCACTGCGCCCCCGCCCGGCCCACCCGGCCGGG 84976 37 100.0 41 ..................................... GCCGACAGCGACCCGGAGGACTCCGACAGTCGGTGCATCGA 85054 37 100.0 39 ..................................... CCCTGGGCAGCAGGAGTGATCGTGATCTACCGCAAGGCT 85130 37 100.0 40 ..................................... CTCGGCGGTGTTGCCGTGGGTGCGTGGTGGCGGGCCGGGC 85207 37 100.0 38 ..................................... CTCCGATCCAGCCCGTATCTCGTCCACCTGGTGCCGCA 85282 37 100.0 37 ..................................... AACTCCGCCACCGACGCCCGGCGCGGCTCGATGTCGT 85356 37 100.0 37 ..................................... GGGTGTGGTCGCCGCGGGCGTCGCCGACCTTCGACGC 85430 37 100.0 38 ..................................... GGATCGGCGAGGGTTCGCAGGATGCGCCGGATCTCGGG 85505 37 100.0 37 ..................................... ATGGCGTAGGTGAGCGCGGCGGCGGGGTCCATCTCGA 85579 37 100.0 38 ..................................... CTTCGTACCGACGCGGAGCTGCCGTTCGGTGTGCCCGT 85654 37 100.0 38 ..................................... AAAGACATGGCCCACGTCTAACCACCCCTTGAGGAGAT 85729 37 100.0 35 ..................................... GTCTGGTCGATGCGGCGCAGCGCCTCGGACTCGTC 85801 37 100.0 36 ..................................... CTACGGCGCTGTGGTGTCGGCGCTGGTGCTCGACGT 85874 37 100.0 38 ..................................... CTGCTGACCACTGGTCAGACCGTCGCGCGGATGATGTC 85949 37 100.0 37 ..................................... GTCGGCAGGAACCGGCCCTCGGGGTCCTCGGTGAGCG 86023 37 100.0 37 ..................................... GCGGGCAGGCGGAGGCCGACGTGGCCGGCGGCGACGA 86097 37 100.0 38 ..................................... CGCGGCGTCCACGCCAGCACGGGTACGCCGTTCTCCGT 86172 37 100.0 38 ..................................... ACCGACGCTGACCAGCTCAACCTCGTAGGCGACGACCT 86247 37 100.0 39 ..................................... CGTGTATTCGACGGCCACCCTGTCAACCCGCGTGGGCGC 86323 37 100.0 37 ..................................... TACGTCGACGGCAAGGAAGTCATCCAGTCGATCGACA 86397 37 100.0 39 ..................................... TGATTGCTTGCCCAGCCTTGCTGAGGCACCTTCAAGGGG 86473 37 100.0 38 ..................................... TTCACCGAGCCGCCCTCGGTGGTAAGCAGCGCCGACAG 86548 37 100.0 37 ..................................... ACGGTGGGAACACCCATGCCGAACCGGCGCGACGACG 86622 37 100.0 37 ..................................... GCGAACTGATCGAAGACCTCACCGACCCCGACCCGTG 86696 37 100.0 37 ..................................... GTGCCGGAGGACCGTGTCGAGGACCTGGAGCGGCGCC 86770 37 100.0 41 ..................................... GGCGTTCGCCAGCGTTTGCGGGTCAGCCCGCGCAGCCGGTT 86848 37 100.0 39 ..................................... GATCTCGGCGAGCTGCGCGAGATGCGCGCGGCCGCCGAG 86924 37 100.0 38 ..................................... GATCTCGGTGGCGCGTAGTTGGGCGCTTTTCTCCACCA 86999 37 100.0 37 ..................................... AATGTCGCGGCGTCGTTGGGCGCGGTGGCGCAGAGCA 87073 37 100.0 38 ..................................... GACGTCATCGGCAAGGACGCGGGGGGCAGCGCCGCGTT 87148 37 100.0 40 ..................................... TCCGCCGCCGACCTGGCGAACTTCGACACCATCGTCAGCC 87225 37 100.0 38 ..................................... TGACTTGCTCGGGACAGCCGGGCGTCCACGATCGCCAG 87300 37 100.0 38 ..................................... TGCGGTGATGTCTATCTGCACGCTGTCTCCTACGCGGG 87375 37 100.0 38 ..................................... GTGGCGTTCGTGGCGCCGAACTTCACTGCGGTCGCGCC 87450 37 100.0 37 ..................................... ACCACCCCCGGCGCCACCGCGATGGCCACCGGGAAAC 87524 37 100.0 37 ..................................... ACCGACCGGGTGCTCGTCGTCTGGCCGCTATAGGGCG 87598 37 100.0 38 ..................................... CCGTAGTCGTGGGCCTCGGACCAGACGGTCTCCTCGGT 87673 37 100.0 38 ..................................... GCCTACCCGGGTGGCCGGTACGAGTCGACAGTTGACGG 87748 37 100.0 37 ..................................... CGCCAGTCTCCGTCGGTCGTGACGTGGAACGCCGCCA 87822 37 100.0 38 ..................................... ACCTCTTTCGCGGCGAGCTTCGCCGCTTTCATCCGGGC 87897 37 100.0 37 ..................................... ACTGTCGCCCGGCCAGGCCAACCCGACGACGTTGGCC 87971 37 100.0 35 ..................................... CGGGGCCAGGTCGGCGCGCGGGGCCGGCTCGCCGC 88043 37 100.0 38 ..................................... CAGACGACCAGCAGGGACCTGGACCCGCAGTTGCACGT 88118 37 100.0 38 ..................................... GAGTCACCGTTGCCGCGCATCGCCAGGTAGCCGGCCCC 88193 37 100.0 38 ..................................... GCCCGCCCCGGCGACACCATCGTCGTCTACACCCTCGA 88268 37 100.0 37 ..................................... TCCTCGTGGAGGTCGACGGCCGCGTGGTCCGCGTCGG 88342 37 100.0 38 ..................................... CGCCCGGCACGCGGCTGCCTCTTCCGCCACCTTCCGGT 88417 37 100.0 37 ..................................... GAGATCGACGCCTACCTGGTCGACGACGAGAATCCGG 88491 37 100.0 38 ..................................... GACATGTGGGACGAGGACCGGCACATCGTGCGGGGGGC 88566 37 100.0 37 ..................................... CACGAAAACCGAGGGAATCCATCTTCGGCTGGATCAG 88640 37 100.0 38 ..................................... TTGAGCGTCAGCGACAGCGTGGACGTCTCCGCCTGCTC 88715 37 100.0 35 ..................................... TCCCCGTACGAGCGCACGTTTGCCCGCTGGTAGGA 88787 37 100.0 37 ..................................... TTCACCGGCGTGGCCGTGTTCGCGGGCAAGGCCGCCG 88861 37 100.0 38 ..................................... TCGCACCACTCGCGGCCGTCGTCGGTCAGGCCGCACAG 88936 37 100.0 37 ..................................... GGCCAGGCCGTGGCGGACGAGGCCAACAAGTGGCTGT 89010 37 100.0 35 ..................................... GTGGGTGATCCAGCGGCGGAACGTTTTCGCGCCGG 89082 37 100.0 38 ..................................... TTGATCGCCTGCTCGGTCTTGGAGATCTCGGCGGTCAG 89157 37 100.0 37 ..................................... ATGAGACTCCTCCTGGTTAGCTCACTGCTCAGCCAGT 89231 37 100.0 37 ..................................... ATGAGACTCCTCCTGGTTAGCTCACTGCTCAGCCAGT 89305 37 100.0 36 ..................................... CCTTCGCCATCGTCGCCGTCGCCCTTCACCAGCCCG 89378 37 100.0 38 ..................................... GACTACAGCCCGGACATGACCGTCCTGCGCGGCGCCTG 89453 37 100.0 38 ..................................... ACCCGGTCCGGATCGACCTTCGGGTCCTCGGTCGGGAT 89528 37 100.0 38 ..................................... ACGATGTCGCTGCAGACCCTCGCCGAGGAGGTCGCCGA 89603 37 100.0 36 ..................................... GTCGTGGTCGCGCCCAGCCACGGCCGCACCCACGAC 89676 37 100.0 37 ..................................... GGCAAGAGCCTCGACGCGACGGAGAAGGACGCCCAGG 89750 37 100.0 38 ..................................... AGGAACACCTGCGGCACCTTGAACCGGATCGTCTCCGC 89825 37 100.0 37 ..................................... ACCCCGAGCGACGCGGCGCATGATGTCAATCTCCCTG 89899 37 100.0 37 ..................................... TTGAACTGGGTACGCAGGAAGGCGTGGACCTGGTCGA 89973 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 83 37 100.0 38 GCTGCGCCCGGCCTCCGCGCCGGGCGAGGATCGCAAC # Left flank : TGCCGCTAGTACAGGCCCGGCTGCTCGCCCGTCACCTCCGCGGAGACCTCGTTGCGTACCAGCCATGGACGGTAAACTGATCCATGGACCTGCTCGTCACGTACGACGTCGAGACCGTCACCCCGCAGGGGCAACGCCGACTACGCAAGGTCGCCAAGATCTGTGAGGCGTACGGCCACCGTGTGCAGAAATCGGTGTTCGAGGTCGTCTGCCGCGAAACCGACAAGGTACGCATGGTCGCCGCGCTCCAGGAGGCCATCGACCCGACCCAGGACAGCATCCGGATCTACCGGCTGCCAACCCACGCGCTCGACGACGTCGAACACCTCGGCAAGCCACGGCTGATCGACCCACGGGGAGCATTGGTGATCTAGGAACCCCAAGTGAACGCGGAAACCCCAGGGGGTTCGGAGTCAAGAAATCTGGAACAGATGAACAAAACGGACCGCAGATCAAGCAAATATGCATCGTCAGATCGCTATCTTTGCTGCTCGCGAGCC # Right flank : CCTTGCCGGCCAGCTGGATACGCAGCTGGTCCCGCTCGCTGCGCCCGTGTCAACGACATTCGAAATTTGACCCTTTAGCGGCGGCCGAAATTTGACCCCCCTGGTTGTTTATCGGTCGTCGTTGGTGGCTGCGGGGACGCGGCCGAGGTCGCGGTTTTTGAGGCGGTAGCTGTCTCCTTTCAGGCTGATGACTTCGGCGTGGTGGACGAGGCGGTCGATCATGGCGGCGGCGACGGTGTCGTCGCCGAAGACCTCGCCCCAGCGGCCGAAGGGTTTGTTAGAGGTGACGATGAGGCTGGCGCGTTCGTAGCGGGCGGAGATGAGTTGGAAGAACAGGTTCGCGGCTTCGGGTTCGAACGGGATGTAGCCGACCTCGTCGATGATGATCAGTGGGATGCGGCCGAGTTTGGTGATCTCGTCTTGTAGTCGGCCGGCGTTGTGCGCGGTGGCCAGTCGGGCGACCCATTCGGCGGCGGTGGCGAACGCGACGCGGTGGCCGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGCGCCCGGCCTCCGCGCCGGGCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCTGCGCCCGGCCTCCGCGCCGGGCGAGGATCGCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-16.20,-17.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 92595-95234 **** Predicted by CRISPRDetect 2.4 *** >NZ_VLKE01000002.1 Micromonospora olivasterospora strain DSM 43868 JD77DRAFT_unitig_1_quiver.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 92595 37 86.5 38 CGACA................................ ATCGGCGTCACCCGCAGCAACGAACCGCTCAACCTCGG 92670 37 100.0 39 ..................................... ACCAACGGGGTCGGCGGCACCGTCGTCGAGGCCACCGGG 92746 37 100.0 39 ..................................... GGGGTGAGGACGATGCGGGTGATGCCGGCGGAGCACATC 92822 37 100.0 38 ..................................... CACCATCGGCAAGCTGTCCGTCCAGCGCGGGGGCGGCT 92897 37 100.0 38 ..................................... CAGCGGGTGGTGCCGAACCGGGTAGTGCCATCCCGGAC 92972 37 100.0 38 ..................................... AGATCGACGCCAAGAAGTTCGGCCGCAAGGCTGGCGTC 93047 37 100.0 38 ..................................... TCCACCTCCGACTCGGCGGCGATCCCATCTTTGAGAAG 93122 37 100.0 37 ..................................... TCGCCAATGCGCGCCCGCGTGCGGTCCAGTAGGACGA 93196 37 100.0 37 ..................................... CCTGTGACCCGAAGGATGCCAAAGGACTCGCGTCAGA 93270 37 100.0 38 ..................................... GGGACAACGTCAGGTACGAGCCGACGTTGACGGACGTC 93345 37 100.0 36 ..................................... TTGACCACGACCCGGTAGTGCCAGGAGGACCGATAC 93418 37 100.0 40 ..................................... GGTGCGGAGTTGTCTGGCCCATGCTTCGGATTCGGTGCGC 93495 37 100.0 37 ..................................... CATCGGACCCCCCACGGGTTCCGACCGGATCGTCTTG 93569 37 100.0 38 ..................................... GCCTTGTGCGCGGTGCTGACCACCACGTCGGCGTACCG 93644 37 100.0 38 ..................................... GCCTTGTGCGCGGTGCTGACCACCACGTCGGCGTACCG 93719 37 100.0 39 ..................................... GGCTCGCCCTTGCGGTCGAGTTCGCCGGTCTCCCGCTGC 93795 37 100.0 37 ..................................... GACGGGGGCCGGCACCGACTTGTCGACTCGCGTGAAA 93869 37 100.0 38 ..................................... CCCGGGGGCCTGTTTCGTGCGGGCGCAGTGACGAAGTG 93944 37 100.0 41 ..................................... GTCTTGGAGGCGCGAATTGCGATGTGCAACATGCTGGCGCT 94022 37 100.0 40 ..................................... AGGACGACCTCGGTACCGCCATTGCCTTCGTGACCTCGGC 94099 37 100.0 37 ..................................... ACCCGCGAACGCGCCATGGCCCAACTGACCGCGAACG 94173 37 100.0 39 ..................................... ACCTCGCCGGCGCGGCCGTACGTGTCCGCGACGTCGCGG 94249 37 100.0 38 ..................................... TCCAGCTCGTCAAGCTCGGTCAGAGCCTTCATCACAGC 94324 37 100.0 37 ..................................... ATGTACTGGCGGGCCAGGTCCTCTGCGCTCTCGTCCT 94398 37 100.0 39 ..................................... ACCGACCCGGGTGAGGCCATCCGTGGGGTCGTCAACGGG 94474 37 97.3 35 ..............................C...... GGCCAGGTCCACAGTGCGGTTGTCGTCCATGGTGC 94546 37 100.0 35 ..................................... AACGGTGGCGGCGGGAATTCGGTGCCGTCGCGCAC 94618 37 100.0 38 ..................................... AGCTCGTTCCACGGCGTGATCAGCTCCTTGGTGCGGGA 94693 37 100.0 36 ..................................... CACCGCCCTGTTGGCCGCCGAGCTGGCCCAGCTGGG 94766 37 64.9 23 ....................AACCGT.ACGC...GCG GTACGTTCAGCCGCTCACGGACG Deletion [94826] 94826 37 100.0 35 ..................................... GACACGTCGTCAGGCCGGAACATCGCCAGGACGGT 94898 37 100.0 37 ..................................... CCGGGCTCGCTGCGCTTCAGCGGGGCCAGGTCGTCGC 94972 37 100.0 38 ..................................... ATGGTCGGCAAGTACGGCGCCGAGAACGGCCAGTACGT 95047 37 100.0 39 ..................................... GTCGTGGTCACCGCGCCAAGCGAGATCAGCGGGACGGAC 95123 37 97.3 38 ..............T...................... GCGAGGATGGAGTCGGCGACCTGGCGGGACCGCTGATC 95198 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 36 37 98.5 37 GCTGCGCCCGGCCTCCGCGCCGGGCGAGGATCGCAAC # Left flank : CGGCGGGGAGGCCACCTGCCCGAACCCCAACGGAACCGGCGCCGGCGGGAACCACAGATCACACTGCGCCCGCTCGCCAGGCCCGTAGACAGTGCGCGAAGCCGGATCAACCGGCGCATACACCGGCCGCAACTCACGGACCCGTTCCTTGAGCACCGTCAACGACCGCGTCCAACCGATACGCTCCGCGATCACCGTCGCCGGCATGTCCGGAAACTCCTTCAACAACGCCCGGATCCGCGGCTCGGCCGCGTCCACGATCGAGCCCTTCGCCGCCCGCACGTACTTCGGCGGCTGCACCGACCGAACCGCGCTACGGACCGTGTTACGCGACAGCCCGAGCTTGCGCGCGATCGCCTTGATCGGCATCTGCTCGGCCAGGTAGAGCCGGCGGATTTCCGCCCAATCCTCCACTTTGATCACCCTCCATGTCTTAACTCAAGATCACTGAAGGGGGTCAGTTTTGACCCGTCGACACGGGGTCATCTTTCACGCGTCGT # Right flank : CAATGTTGCCGCCGGTCACGTCCGCGACGACGCCGGGCGCTGCGCCCGGCCGACATCCTCGACCAACTGCTGCAATCACCGAGGATGGCAGCGGTCGACTACCTCCGGAAACTGCTCATCGCCACCAACGTGCTGCCCGACCGGCTGGAACCTCTTGCCCGGCTCGAACCGTGGCTCGACGCTCAGCTCGCTGACCAGCCCGCCGAGCACCAACGACTCGTGCGTCCTTTCGCCCAGTGGGTCGTCCTGCGCAAGGCCCGTCGAGCCGCCAGCCGCGGTCGATACACCGGCAGCTCCGCCAACGCCGACCGCGAGGACATCCGCCAGGCGCTCGTCCTACTGTCCTGGCTCGCGGAGCGCCACCTGACGATCAATGACCTCACCCGAACCCACCTCGACGAGTTCATGACCGTCGCCGGATCCAAGCGACGTCGAGCGGTTCGGGCGTTCACCGCGTGGACCGCCGCCCGCCGGATCACCCCAGAGCTGATCATCGCTCG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGCGCCCGGCCTCCGCGCCGGGCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCTGCGCCCGGCCTCCGCGCCGGGCGAGGATCGCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-16.20,-17.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 6635359-6635150 **** Predicted by CRISPRDetect 2.4 *** >NZ_VLKE01000001.1 Micromonospora olivasterospora strain DSM 43868 JD77DRAFT_unitig_0_quiver.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 6635358 29 86.2 32 CAA.A........................ GCAAGGGCGGCCATCGCGGCGGCAACCATGAG 6635297 27 86.2 33 .....T..............--......G CGCCGGGCGTACGAGCAGCTCGCAGTGGACCTG 6635237 29 93.1 30 .....T......................G TTGTACTGCATGAGGCCCGAGCAGTCGAAC 6635178 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 4 29 91.4 32 GTGCTCCCCGCGTACGCGGGGGTGATCCC # Left flank : CATCGCCTGTTCCCTCGAACCCAAGGATGCAGCCACGCTTCCGAGCAGCGACGGCCCCTTGGGTTCCCGGTGAGGAACCGTCAGTTTCGCTGAACCCACGGGAGCCACGGCCCCTCGCTTGGGTAGCTGTCCCAGCCCGCCAAGTCTTTGATCTTGAAGGGTCCGCGCTCGACCATGGCGTGACCGTACGGCGCGGCCAGAGCTACACCTGCGCGTCAGCGCCGCGCCCGCAGTTCACCACCAGTTCCTCGAACGCTGCCAGCCCCTCGACGGCACCCAGGCACCCAGGCACCCGGTGACCCCGGATAGCCCCCCATCACCGGACAGTTCACCGGACGCCCTATCTGTGACAACGCTCGTCGCTAGTAGGCGCGTTTCGCGTCACGGCCGCCCGCGTGTCCGTTGAGGTTCCCCTAACGGGACACCAGCTCAACCCCCACCGGCCGCTCCCAGTCACCCACGAAGATCAACTAATTGGCCCCTGGTGTCTCGGTTCTTAC # Right flank : TCGCCGACGCCGGCGTCGTCGTGGGTCAGCGGGTCGGTTCCTCGCCTCGGGATGTCTCTCGGCTCGCCCTCGGTGGCGGTGGTACGGCATCACGTTCTGCAGGTTGCCGAGGTAGGGACTGGCGGGTGCTGGTAGGGAAGGCCTTCGCGGCCGCGGTGATCGCGGGAGAGATCTCGGCGATTTCGGGCAGCGGGGTCTGCCGGTCGGCGAGGGGTGCTGCGAGCCGGACGATGTCTCGGAGCTCCTCGTGCCACTCAGGGCCCATCTCGTCGAACAACTGCTTGACCGTGGCTGCAAACGCCTTGGTCTCCTCCGGGGTCCACGGCCGTTGACGTTCGGCGTCGATCGCCGCGGCGGTTCCGGCTGGCCAGCGCCAGGCGCTGGCGCCGTCGAGATGGTTGGTGTGCAACTGCTGGTTGCCGCGCCGGTAGACGGTGGCAACATCGACGATGCGGTCCCGGTCGATCGTCTCGGCGGCCCGGCGGACGCCCTGGTAGGAG # Questionable array : NO Score: 3.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.57, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTACGCGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCCTACGCGGGGGTGAGTCC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.80,-9.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //