Array 1 1599212-1600732 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP086003.1 Clostridium septicum strain FDAARGOS_1551 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 1599212 28 100.0 37 ............................ ATCAAATCTTTTATTTTCTTTACAATGTTCACACATA 1599277 28 100.0 37 ............................ AAAGTAAATATTCTTAAATCTATCCTTGTTCATACTA 1599342 28 100.0 37 ............................ TGATTTAATAATACCACTTTTAATTAATATCGTCAAC 1599407 28 100.0 37 ............................ ACCATAGAATAAACAACTAATTTACTGCCTTCTATTC 1599472 28 100.0 37 ............................ CCTTATATGCTAAATAACCATTGTTTAGCTTTTTTCC 1599537 28 100.0 37 ............................ TATCAAACTCCTATACTATATTATAACATATTATTGA 1599602 28 100.0 38 ............................ TTACAGCCTTAAATATAGCCCCCGAAAGTCTAACTAGC 1599668 28 100.0 38 ............................ CCCTCTTTCTCTTGATTTAGATTTGCTTCTAGTTGCTC 1599734 28 100.0 37 ............................ CCTTTCCATATCGTTCCCTTTTTTAAATTGCTCCATA 1599799 28 100.0 37 ............................ TTTGCTCTCTCCCGTCGATTATTATAGTTAGGTTTTT 1599864 28 100.0 36 ............................ TGTAGCTTAATATATTGCCCTTCAAAGTAAGGTGCT 1599928 28 100.0 37 ............................ GTGCTATACCATCTGTTACTGACTGATAAATACCTCC 1599993 28 100.0 38 ............................ TTATCTAAAGAGAATGGAGAGATAGGGATACAAACAAT 1600059 28 100.0 36 ............................ TACAGAGCTTAAAGACTGATAAGAAGTCGAAAGCTG 1600123 28 100.0 37 ............................ TCATCATGTAGAAGTTCAATAAGTGGATCTAGTATAA 1600188 28 100.0 37 ............................ ACAAATTAAAAAGAGTAGATTAATTTAAAACCTACTC 1600253 28 100.0 37 ............................ TTATCTAATCCTAAAAGTTTCATAAAAAATTCTCCTT 1600318 28 100.0 37 ............................ AAGGTAGCAATTTGATAGCCAAAGGTAGTAATAAAAA 1600383 28 100.0 36 ............................ ATAGGAATGATTACTATAGGCTTTAGAACAACGGAA 1600447 28 100.0 36 ............................ CTTAGTTCAACATTTTTGTTTAAGTTGGTGTTTATA 1600511 28 100.0 36 ............................ ATTCATAGCACTCATCTGATCATCAAAAGTAACAGG 1600575 28 100.0 37 ............................ GCAAACAAAGAATGCAAACAGAGTATGGGCTGGAACT 1600640 28 100.0 37 ............................ CGAGATAGCTAAAACTTTTACTATAGACAAAGAACTA 1600705 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ====================================== ================== 24 28 100.0 37 GTTTTATCTTAACTAGTGGAATGTAAAT # Left flank : ATTAAACATTTAATAAATGATGAAAAATATAAACCTTTAAAGGCATGGTGGTAAAATGTTTGTTATAATAACTTATGATGTTAACGAAAAAAGAGTAAATAGAGTGAGAAAAATATTAAAAAAATATGTAACATGGACGCAAAATTCAGTTTTTGAAGGAGAAATAACAGAAGGAAAATTAACTAAATGCTTAGCAGAGGTTAAGAAAAATTTAGTTTCTGCAGAAGATTCATTATATATTTATAGAGTTTCATATAGCAAAAATATTACTAAAGATGTAGTTGGAGTAGAAAAAAATTTAGATGAGTTATTTATATAGTTGCAGTAAGCGAATTTTTAACTTTAACCCGTGGAATACTTGAAAATAGAGAGATACACAGGTATTTATATTAAACAATAAATACCTTACTGATGGTTTACTGCAAAAGTATATGTTATAATAAAATAAAATATACTTGAAACATAGTAAAATCAATATGTTTTATATCATATTTTTTGGG # Right flank : TTTTCGCATCTATCGAAAGAGAGTGTAAAATAGTCTGTGTAAACTTCAGAAAATGATATAATAAATTATCAATTATGGAGGGAACACAGACTATGTCATTTTCAAAGAAAGAATTAATAAAAATATTAGCAAAGGATCCAAATATTAAAACAGCTGAAGATATTCAAAATGTTTTAAAAGACTTATTTGGAGGAATGCTTCAGCAAATGCTGGAAGCCGAATTAGATAATCATCTTGGATATGAGAAACATGATTACCAAAATAAAAACACAACTAATAGCCGTAATGGCAAGAGCCGAAAAACTATGAAATCCAATCTTGGCTACTTCGACTTAGATGTTCCAAGAGATAGAGAAGGTTCTTTTGAGCCTGAAATAGTAAAAAAACATCAAACTGATGTTTCACATTTAGAAAGCTCAATAATTGGGATGTATGCTAAGGGAATGACTACAAGAGATATAGCATCACAAGTAAATGAAATATACGGAATGGACATATCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTTAACTAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [83.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 1602224-1607709 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP086003.1 Clostridium septicum strain FDAARGOS_1551 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 1602224 28 100.0 38 ............................ TTCTCTTTAGATAGTGGCATTTGCATAATGCTCAATCC 1602290 28 100.0 37 ............................ TATTTTCCACAACTTGCAAGTTGTTGGCAGGGTCAGC 1602355 28 100.0 38 ............................ ATTTTTAGGTGAAAACAGTTATTTTGTTACTTTTGTTA 1602421 28 100.0 37 ............................ GGTGAAATGATATTTGATTCTACATCAAACTCACCAA 1602486 28 100.0 37 ............................ ACCGCATATATTATAGCGTTCCATAATTGTAGCCTCC 1602551 28 100.0 37 ............................ ATTATGTAGACGGGAGCTGGGATAGAGTTTTTAGCTC 1602616 28 100.0 38 ............................ GCATCTAGATTTAACCCTTCTTGGATTAGCATAGTTCT 1602682 28 100.0 38 ............................ GTTATTTTTATTTTCGTGTAATCATTGAAAAATGTTAA 1602748 28 100.0 37 ............................ ATGTCCGCATTTGTCAACAAGTTTTTCGTTTAAAACT 1602813 28 100.0 37 ............................ TCTATTATTATAGTTAGGTTTTTTAATATTTTTTTAA 1602878 28 100.0 38 ............................ AAGTAGGGATTATACGTTCCGTAACCGTTCAATTTCAT 1602944 28 100.0 35 ............................ AACAAAATGAAATGGATAATGATTACAGCAATTGC 1603007 28 100.0 38 ............................ CTGTTGTAGGATATAAAGACATTAAACCTCTAAGCGAG 1603073 28 100.0 37 ............................ CTTTGCTTCTTAATAATGATGGCTTCAAGAAAGCACC 1603138 28 100.0 39 ............................ TGACACGCCCGGGTATATATAGTTATATATTATTTTCTT 1603205 28 100.0 37 ............................ TCTTGATACAAAGCTTTGTAAGTGTATATTTCATTAT 1603270 28 100.0 35 ............................ AAATTGTGTCGAGGGGGGTAGAGGGGGTTTCGCTC 1603333 28 100.0 37 ............................ GTCTATATGACTATCTCACCATAAGAGATACACAAGG 1603398 28 100.0 38 ............................ ACTTGAACTCTATAATGAGTTTGACTTTTTTCAGGTTC 1603464 28 100.0 39 ............................ TGCTTACCTCCATGTATATAAGAAAAGCCGAGGTTAAAC 1603531 28 100.0 37 ............................ TACATGGCAAAATAATCTCCTAGTCTAATTTTAAATT 1603596 28 100.0 36 ............................ TTGAGCAATAACCACCCTCATGTATGTGGGCAAAAT 1603660 28 100.0 38 ............................ CTAGTTACTTTGATTGAGGTGATATTTTATGAACGTAA 1603726 28 100.0 38 ............................ ATTGACTTATCTGTTAACTGACCGTTTATTAGTGATTG 1603792 28 100.0 36 ............................ TTTGCCAGCACACTTTCTTTATGTGTATTTGTATTC 1603856 28 100.0 38 ............................ CTAACAACAAATTACAATATGGTTTTGACTGAACCTGA 1603922 28 100.0 37 ............................ AACGCATTGTCTATTTGAAATACCAATCCAACTAAAG 1603987 28 100.0 37 ............................ GCGATATCTATTCATAGTTAAATTAGAATAATATCTA 1604052 28 100.0 37 ............................ TTCAGTATTGTTCAAATTACGCCATTTAGGTGCGTTT 1604117 28 100.0 38 ............................ ATTTTAGAGTCAGTTGTATTTATAGACTTAATAAACTT 1604183 28 100.0 38 ............................ GTGCCTAAAATAGTTATAGGTCTCTTTTCATAGTATGC 1604249 28 100.0 36 ............................ ATTTGGAAGTGGTCGATGATTTAATTAAGAATGCAG 1604313 28 100.0 36 ............................ TCTCTTATCCCTCTTGTAGTAGGGTTAACAAACACA 1604377 28 100.0 37 ............................ TACAAAATTGGGTATGCACTAAGTTATGCACTTGCCT 1604442 28 100.0 37 ............................ ATCAATGTGTTATCTATTAACACGAAAAAATAGCCTT 1604507 28 100.0 36 ............................ TTCCATAATCCTTCTACAATCCACCTTCCTATCTCA 1604571 28 100.0 36 ............................ TCAAAAATGAGATGCACAATAGAAAAGGTGCATTCT 1604635 28 100.0 37 ............................ GGTGTAGAGTAAGGCGAACAAGTGATGTAAGCTGGAG 1604700 28 100.0 37 ............................ AAGTATAATCCTACAACGGAGCTAGATAAGGCTATAA 1604765 28 100.0 38 ............................ GTGCTAGAAGAATATAGCGACTGTTTATTCCATTTCGT 1604831 28 100.0 37 ............................ TACAAAAAATTATGTTTACATTTAGTAATCTTGTTAC 1604896 28 100.0 36 ............................ TCAAGGTTCGGTATAGTAAGTACTAAATGGTAAAGA 1604960 28 100.0 35 ............................ TTTTACAAACCATAATAATCCTCCTAACCTATATA 1605023 28 100.0 37 ............................ TTGAAACCTTTACAACATTTAGCTGAAGGTATTCTTG 1605088 28 100.0 36 ............................ AATCCTCGAATAATTATGCTCAAATTGAGTAATACG 1605152 28 100.0 36 ............................ TATAGAAAATTATGTTTACATTTAGTAATCTTGTTA 1605216 28 100.0 37 ............................ TCGCCAAAACAATCAAAGCACTAGCAGACACGCCCAT 1605281 28 100.0 36 ............................ CTTGGCTACCTAATAAGGTTTCCCATGCAACACCCG 1605345 28 100.0 39 ............................ CTCGATAGATTATTATTAATTATATCTATTTGATTTTGC 1605412 28 100.0 36 ............................ TTTTGTTGATGTTTAAATGATAGCACTTGCACTAAG 1605476 28 100.0 37 ............................ ATTGCTATAGCAGTTAAAACTGGCTGTAAAACTTCAT 1605541 28 100.0 36 ............................ CTATCTGCTATATTCTGTTTCGCAATATCTTCTCTC 1605605 28 100.0 36 ............................ ACAAGGTCGAATTCAGCATAACCAGGACAATGAGTA 1605669 28 100.0 38 ............................ CCAAATTTTGAAATGTATTGCTTAATTCTTCAGGTTCA 1605735 28 100.0 37 ............................ CTATTTCTGTTATTCTTTCTTGTATTTCTATTCCCCA 1605800 28 100.0 37 ............................ TGCATAAATCTCTTCATTCTCTTGTTTAAAAGTTAAA 1605865 28 100.0 37 ............................ GCATCTAATTTTGCTGTATCTGATATATCAAGCTTAC 1605930 28 100.0 38 ............................ TCTGAAACGCTTTTTTTATCCATTTTTACAAGAGGCTC 1605996 28 100.0 39 ............................ TAGTGTTTGACGTTGATATCAGTCCCTGGAACTCTGCAC 1606063 28 100.0 38 ............................ ACTGTAGCATCAAAAGTATATTTTATATCTTGTATAAT 1606129 28 100.0 36 ............................ TAGCAACCGCCGAGTCCGGTAAGTGATTAAAAATCA 1606193 28 100.0 38 ............................ TCAAGTTAGATGTATACTCGTCATATAATGGGATAAAC 1606259 28 100.0 37 ............................ CTTTTTTTCTCTAGTATTCTTATTAGTATTCTGAAGG 1606324 28 100.0 36 ............................ CTGATAAATCATACATCTTTGTTCTAAATCTAACTG 1606388 28 100.0 36 ............................ TAAAAAAGAAATATCCAGGATAGTGAAGTCTGGAGG 1606452 28 100.0 35 ............................ GTCTAAACCTCGATTTTTGAGGTTTTTTGTAATTT 1606515 28 100.0 36 ............................ TCTTCTATGAAACTTCTTTCTTTTAAAAAAGAAGTT 1606579 28 100.0 38 ............................ TGGTTCTAAATCTTTAAAAATAAAATCTATTGCAGTCA 1606645 28 100.0 37 ............................ TAATCTTGATTATAGTTATTAAATCCACTTCCAAGCG 1606710 28 100.0 35 ............................ AGCAAAGAAGCATCAGATGCAGCAGAAACATTAGG 1606773 28 100.0 37 ............................ CGATAGGACTTCATACATCTCAAATAAATAGTATTAC 1606838 28 100.0 37 ............................ CACAAAATTTATCATAATCAACACCAATATCGGATAT 1606903 28 100.0 36 ............................ TTAACATTGTCAAGTTTTTCCGTTTTGTCAACAGGC 1606967 28 100.0 37 ............................ TTTTAAAAATAATTTAAAATAATTCAAAATAATTAAA 1607032 28 100.0 35 ............................ ATCATACAAAAATATTCCCTCTTATCTCTTTTAAG 1607095 28 100.0 37 ............................ GTTGCATTAACTGAATATATAATATAATATAAAATAA 1607160 28 100.0 38 ............................ TCTATAGCGTAGCGTTGCCCAAAAAAAGTGATAAATGA 1607226 28 100.0 35 ............................ AGCACAGAGATGTTCTTATAGTATTATTAAAACTT 1607289 28 100.0 37 ............................ GTGAATTCGTGATAGTAAGAACAAGTTAAAGTTGACT 1607354 28 100.0 37 ............................ TTTAAGTAGATAAAATCAAGTTAAGTACGCTGCTCGC 1607419 28 100.0 37 ............................ TAGCCTTGAATCTGTTTAACATTATGCAGAGAATATA 1607484 28 100.0 38 ............................ TATTATATTAAGGGGTGCAAATTTTATTTTTAGTGCGT 1607550 28 100.0 35 ............................ GGCAACATTATCATATCTAAAACATAAAGACCAGG 1607613 28 100.0 36 ............................ CCCTTCTAAAATTGTAGACCCCACAAGGGGGCACAC 1607677 28 96.4 0 ...........................A | GAGAG [1607698] ========== ====== ====== ====== ============================ ======================================= ================== 85 28 100.0 37 GTTTTATCTTAACTAGTGGAATGTAAAT # Left flank : GAAAAATGGGGAGAAAAATACTTAATAGCAGTAAGGTCTTGGAGAAATAACTGGAATGAGTTATCAACATTCTTTAAATATCCACCAGAGATTAGAAAAATAATATATACAACTAATGCAATGGAAAGTTATAATCGTCAACTGAGAAAAGTTACTAAAACTAAATCTATATTTCCGAATGATGAATCATTAATGAAGATTTTATACCTTGCTACCGTTGATATAACAAAGAAATGGACCCAATCAATACGAGGATGGGCTCAAATTTTAGCTCAACTATCAATCTTCTTCGAAGGTCGTTTAGACGACCAGTTGTTCTAAAAAATATTTAGTCTAACTCTTATTAAAGTGCAGATTATTATGTAAAATTTATCAATTAAAGAAAAATAAAGGTTGGATGTTGTATTAACCTTTCCAACCTTTAAAATAAAACTAAATTTTCTAAAGTTTACACAAAAATATTGACAGACTCTATCGAAATATTCATTTGCTAATTCTTG # Right flank : ATAGTCTGTGTAAACTTCAGAAAATGATATAATAAATTATCAATTATGGAGGGAACACAGACTATGTCATTTTCAAAGGAAGAATTAATAAAAATATTAGCAAAGGATCCAAATATTAAAACAGCTGAAGATATTCAAAATGTTTTAAAAGACTTATTTGGAGGAATGCTTCAGCAAATGCTAGAAGCCGAATTAGATAATCATCTTGGATATGAGAAACATGATTACCAAAATAAAAACACAACTAATAGCCGTAATGGCAAGAGCCGAAAAACTATGAAATCCAATCTTGGCTACTTCGACTTAGATGTTCCAAGAGATAGAGAAGGTTCTTTTGAGCCTGAAATAGTAAAAAAACATCAAACTGATGTTTCACATTTAGAAAGCTCAATAATTGGGATGTATGCTAAGGGAATGACTACAAGAGATATAGCATCACAAGTAAATGAAATATACGGAATGGACATATCACCAACATTAGTTTCTAATATAACAGATAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTTAACTAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 1609130-1610972 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP086003.1 Clostridium septicum strain FDAARGOS_1551 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 1609130 27 78.6 38 A...G.-.AG.T................ TTTGTAAAAATTAATAGATAAAATATTGATTTTATATC A,C [1609131,1609141] 1609197 28 100.0 35 ............................ AAAGATATATTTATTTAGCTACGCTTCGCTATAGA 1609260 28 100.0 36 ............................ TTGTAGGATTATACTTGCCTTGCTTTGCTATAAAGA 1609324 28 100.0 37 ............................ AACAATTTATGTTCTAAAGTAGTGTCAAAATCTATAT 1609389 28 100.0 38 ............................ GTAAGGGTTTTTAGTAGATGGAATATCTTATCTATAGC 1609455 28 100.0 36 ............................ AAAGTGCATATATACTAGATGTATTATATTTAGTAT 1609519 28 100.0 37 ............................ CAAAAAAAAGAATTTATTAAGGCTATGTTAGAACTTG 1609584 28 100.0 37 ............................ TTGGCAACATTATCTGCTAAAGTATTTAAATTGTAAA 1609649 28 100.0 37 ............................ TCGCTTGTCTTTGTAAAATTATACCCATTATCTAATC 1609714 28 100.0 37 ............................ TCAACTTCTTTAAAAAGACCAGTTATACTATTAGTTA 1609779 28 100.0 36 ............................ TTGCATGAACACTAAATGCAAGGAATGTGAGTTTTG 1609843 28 100.0 37 ............................ TTCTCTCACCCAATCATGCTTAGTTCTAGAATATCTA 1609908 28 100.0 38 ............................ GTAGGTATTTGTGTTCATAATACAGCTAATGATGCACC 1609974 28 100.0 38 ............................ CGTCACGGCAAATCATTTACAGCTACCAATTTTGTCGA 1610040 28 100.0 37 ............................ TCAATTCCACCACGCAAACTAGAAGAACCTGTCTTAT 1610105 28 100.0 39 ............................ TGAGCAAGATAATTAATAGAATCATAAGTAATTTTTTGC 1610172 28 100.0 37 ............................ ATATCAAAATTATCAAATGTAACGTTTGCATAACATT 1610237 28 100.0 36 ............................ GTGAAAGCTTCAATCACAACAATCACCTCCAGAATT 1610301 28 100.0 37 ............................ GTAGGAAGCGTTCATCTTCTACAAAAGTGTTTTCGGG 1610366 28 100.0 36 ............................ TCACGAATACCTTTTACAATCGCATCGAATGGACTT 1610430 28 100.0 37 ............................ GGGTAATTTTTTAATATAGCGTATATATCGTTGTTGT 1610495 28 100.0 36 ............................ AATAGCAAGTACAAGAAAGCTGATGGCTGTTTACGG 1610559 28 100.0 37 ............................ TTTGGTGGCTCATTCAAGATTGATAGAGTTATTCAAG 1610624 28 100.0 36 ............................ AAGTTTGATACTCTACAAATTTTGTTAACTTGGTCT 1610688 28 100.0 37 ............................ TCTTTTTACGCGTCTTATAATCCTGAATTGTATACAG 1610753 28 100.0 36 ............................ TTTATTTATTTAAAAAGGAGCGTTTTATGGATTCTT 1610817 28 100.0 37 ............................ TACAGTTTAGAGGAAATAAACAGAATATTTGAGTATT 1610882 28 100.0 35 ............................ TTAGTTCAAAAACGATGGGAAAATATGGAGGAAGT 1610945 28 96.4 0 .......T.................... | ========== ====== ====== ====== ============================ ======================================= ================== 29 28 99.1 37 GTTTTATCTTAACTAGTGGAATGTAAAT # Left flank : TCTACTGAGGAGGTCGCATTAGCGGAATTAGATAGATTAGAAGAAAAATGGGGAGAAAAATACTTAATAGCAGTAAGGTCTTGGAGAAATAACTGGAATGAGTTATCAACATTCTTTAAATATCCACCAGAGATTAGAAAAATAATATATACAACTAATGCAATGGAAAGTTATAATCGTCAACTGAGAAAAGTTACTAAAACTAAATCTATATTTCCGAATGATGAATCATTAATGAAGATTTTATACCTTGCTACCGTTGATATAACAAAGAAATGGACCCAATCAATACGAGGATGGGCTCAAATTTTAGCTCAACTATCAATCTTCTTCGAAGGTCGTTTAGACGACCAGTTGTTCTAAAAAATATTTAGTCTAACTCTTATTAAAGTGCAGATTATTATGTAAAATTTATCAATTAAAGAAAAATAAAGGTTGGATGTTGTATTAACCTTTCCAACCTTTAAAATAAAACTAAATTTTCTAAAGTTTACACAAAA # Right flank : TACAACTTTAATTGGGGTTAATCCGATTTTATTACATTCTTATCTTAGCACTTATATGTAAAGTTAATTATACCACATATATATGGTATAATTAATGTAGCTATAAACTATAGGTATACTTTATAGGGGTAGTTCAAATCTATACTATTGTATTATCCCAAAAGTGAGAGGTTATACTAATAAGTTTGAGTGATATAAAAATTATGGTTTTTTAAAGCCTTAATATATAAGGATTAAAATCTCATTAACCTTATAAAGCAATAAAAAAAGAAGGAGGATTTTATGTATAGTTTTATTTTGGAAGTTTTATTTATAATGGTACCGTTGGCAATAAGTCTGATTATTTATATGAAAATTGATAAAAAATATGCTATAACAAATATAATAAGTCTAAAACTAGGTATAAAAAGAGAATGGATGGCGTTTTTTTGTTTTTGTTTTACAATTTTAATTATGCTAACAATAAATATGATCAATGAGTATGTAATTAATATTCTGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTTAACTAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //