Array 1 77078-76408 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AHLG01000080.1 Staphylococcus epidermidis VCU126 contig00005, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	====================================	===================================	==================
     77077	    36	 100.0	    35	....................................	TCTATCGTATTCCCTTTAGTTTCATCATTATTTGC	
     77006	    36	 100.0	    34	....................................	TGAATCATGTTCGCTATACGTTCCGGCTTTTCTT 	
     76936	    36	 100.0	    34	....................................	TTTAATTTGTTTGCTCGATTGTGGGTTAAGCTAG 	
     76866	    36	 100.0	    35	....................................	AATAAGGTCGTAAACTTGTTGGTAACTATCTTTTA	
     76795	    36	 100.0	    34	....................................	AGATTTCCTTACGACTAAGACCTAAAAATTCTTC 	
     76725	    36	 100.0	    35	....................................	GCTCCTTTTATATATTTTATTTTGTCATTATTTAA	
     76654	    36	 100.0	    35	....................................	CAATAAATCCATTTTCTAATACATAATAATTTTTT	
     76583	    36	 100.0	    35	....................................	TAGTAATAATTGTCATTTGCATACGTTACATCGAT	
     76512	    36	 100.0	    34	....................................	TAGTACGGTCGTGAACATTTTTTCTTGATTCTCT 	
     76442	    35	  86.1	     0	........G...................G.-...GT	|                                  	
==========	======	======	======	====================================	===================================	==================
        10	    36	  98.6	    35	GATCGATACCCACCCCGAAGAAAAGGGGACGAGAAC	                                   	       

# Left flank :   AAAAAATAGATTTTCGTTTCTTATGATATGCAATTAATCCGACAAAAAATTAAGTATAATGAAAAATTGTAAGTTTCATGCGGTTCCTCATCTTAATTTCTATGAAATGAGGTACGACCTGAGGAGTAGGTTTACTGAGAAATAATGTATTTACGCTGGGGCTTCAAGTCCAATTTAGTTTTTACATTTCATACTTGCACATTATCAAACAAAATCAATTATTAAAATAGATGTTTAAGTATTTTTCTTCTTGTAGTGAGGGAACGTCTAATTTTTATTCGAAATATAAAAAGAAATGAAAGGTTAAATTAATATTAATTTTATTAAATGAATAGGCTAAACCATCTTAAATGTAGTATACTATTAATATAAATGTAATTATTATAAAATTTGTCAAAAAAAGTGACATATCATATAATCTTGTACTAGTGATTGTCATATTTTTTGACAGCAAAAATGATGCTTGAAATATAGTTGTGATGGCATTTGTTAAAGTATCG
# Right flank :  GTAAATCTAACAACACTCTAAAAAATTGTAGATTTTGAATAAAATACGCATTGATTAATTTCTAGGGGATGGAAAAATGAAAGATGTTATTTATGTAGAAAATCATTACTTTGTTACTGCGAAGGAAAATAGCATTAAATTTAGAAATGTCATAGATAAAAGTGAAAAATTTTATTTGTTTGAAGAAATTGAAGCTATTATTTTTGATCATTATAAAAGCTATTTTTCACATAAATTGGTAATTAAATGTATAGAGAATGATATTGCGATTATATTTTGTGACAAAAAGCATTCTCCAGTTACACAGCTCATTTCTTCATATGGCATGGTTAATCGTCTTAAAAGAATTCAAAGTCAATTTCAGTTATCGGGAAGAACAAAAGATAGAATTTGGAAAAAGATTGTTATAAATAAAATTTTTAACCAAACACGATGTCTTGAAAATAATTTACATAATGAAAATGTTAAGCTGATGTTAGGTTTTGCAAAAGAAGTGAGTT

# Questionable array : NO	 Score: 6.19
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GATCGATACCCACCCCGAAGAAAAGGGGACGAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,14] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GATCGATACCCACCCCGAAGAAAAGGGGACGAGAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.30,-7.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [5-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.65   Confidence: HIGH] 

# Array family : III-A [Matched known repeat from this family],   
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