Array 1 910569-912980 **** Predicted by CRISPRDetect 2.4 *** >NC_018408.1 Mycoplasma gallisepticum NC96_1596-4-2P, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 910569 36 100.0 30 .................................... AATCGAATAATTATGTTCAGATGTACTTTG 910635 36 100.0 30 .................................... GAAACGGCCGCAAGTTACTTACATACAATT 910701 36 100.0 30 .................................... TTTGCATATTTAGATCGTTACTTTGACAAA 910767 36 100.0 30 .................................... AATAAATTTAAAATTGCCGATTGTGTTCAA 910833 36 100.0 30 .................................... AAAGCCCCGAACAACTAGCTTTCGAAAAGA 910899 36 100.0 30 .................................... ATTCATTAACAAAAAAGATGTTAAATAAAC 910965 36 100.0 30 .................................... TTTTTTCAAAATTATACAATAACGATTTAA 911031 36 100.0 30 .................................... CAGATTTTAAGAAAGAACGTTTAATTACAA 911097 36 100.0 30 .................................... GTAATACTCAAGAACTGCATCGCGCAAGTC 911163 36 100.0 30 .................................... AAGTAACTTGCAGCCGTTTCATGATCAAGT 911229 36 100.0 30 .................................... ATCTTGTTATTATTAGCGTTTATTTGGCCA 911295 36 100.0 30 .................................... TCTTGTGTCTTGAAACTTGCTATAAAAGTA 911361 36 100.0 30 .................................... TGATTAATAATAAAGTCAATCTTTCACATT 911427 36 100.0 30 .................................... AAATAAGGGATATCAAACGACATATTATGC 911493 36 100.0 30 .................................... AAAGTTGTATTGTGTTTGAACCATTTCACT 911559 36 100.0 29 .................................... ATTTAACAAAGAATGAGATCGAATTGAGT 911624 36 100.0 30 .................................... AGGTTGTTCATGATTGACATTAAAATTAAA 911690 36 100.0 30 .................................... ATTCAATTGCGTTTTTTAAACGTACAAATA 911756 36 100.0 30 .................................... TTTGTTTTTATCTTGATTCGAAAGACATTA 911822 36 100.0 30 .................................... ATTCTGCCGCCACGATATCGATTTCAGTTC 911888 36 100.0 31 .................................... TTTTTTGTTAATGAATTAAAAATCTTATCAG 911955 36 100.0 30 .................................... TTTTTTAAGCTCATCTTCAAGGTGTTGATT 912021 36 100.0 30 .................................... AACTTATCTGCATAACCCTTTTGAATCTCT 912087 36 100.0 30 .................................... AAGTTGATCATTTAAATGAGCTTTTAAAAA 912153 36 100.0 30 .................................... ACGTTTGAGGTTCAGCTAATTCTGGGGTTA 912219 36 100.0 30 .................................... TAATTAATCGCGATAATACAATGTATTTTG 912285 36 100.0 30 .................................... TTTGATCATCGACTGTTCAAAGAAGGCGTA 912351 36 100.0 30 .................................... TAGTTAAATTAATTTTTAAAGGATGGTTTA 912417 36 100.0 30 .................................... TAATAATCTTAATTTTAGTGTGTTTGTCGT 912483 36 100.0 30 .................................... GAATTAAATTATCTTTATAAGTAAAATAAA 912549 36 100.0 30 .................................... TAATAATCTTAATTTTAGTGTGTTTGTCGT 912615 36 100.0 30 .................................... GAATTAAATTATCTTTATAAGTAAAATAAA 912681 36 100.0 30 .................................... GTTTTGCTTATAAATTGTTACAAGACTTCT 912747 36 100.0 30 .................................... ATTCTGCCGCCACGATATCGATTTCTGTTC 912813 36 100.0 30 .................................... ATGGTGACGAATATAAACCCCAACTTGATC 912879 36 100.0 30 .................................... CAACAGCCGTTGTTAAAATTAAAAAAACTA 912945 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 37 36 100.0 30 GTTTTAGCACTGTACAATACTTGTGTAAGCAATAAC # Left flank : TTGATAAAGAAGTTGTTGCTAAACTTAATGAAACGTTAGGCCGTGATATTATCTCGTTAGATACTTCTTACTCTAAAATTCTGAAATCAATAATCAAGATTTCAGAAGATTATATAGATCATGAATTTATCTATTCATATCTGGAGTTATTACATTGATCAAAAGAAATTAAAACAATTATCCTTAAAGACTTTGATAATATCGATCTAAAAAGGTTGAGTAATTTAACTCAAACTACTAATCTAATTATTATGAAAAATGATATTATCTATGATCTTGAAAAACATTTTGAGTTTTTTGAGACATACTGCTTGATTGATCATGATTATGAAAATATGATTAAGATTGATAATATGCCTTCTTTTGAATATTTATTAGAAGATATTTTCAAAGTTATGGTTGATGAAGAGTTTAAGACCACAATGTCTTTTCATCAGCTAGAAATAATTAAAAAGGAATTAAAAAAGCACATTAATTAGCTTATTTTACTTGACAATGAG # Right flank : CAAAAACAAGTATTTTTTACAAACGAAAAAGTTTTATCATTAAACATATTTAATCTGAAACAAAATTTTGAAATAAATAAACTTTACTTAATCTTTTGTTTCATATTAAACAACATAATTCCAGTTGCTACTGAGACGTTTAAGGACTGTATCTTATCAGTATACATCGGGATCTTGATCTGGTAATCAGCATTCTTAATTAGTTGACTCGAAACTCCCTTTTGTTCGTTCCCAACAATTAGAATTGATTTATTAGCATAATCAACATTATAATCTTGAGCTTGATCACTTAAATTAGACACATAAGATCAAAAGCCATACTTATCTTGTAGATCCTTGATCGCATAAGATAAGTTGGCAACCTCAATTAGATTAAGATAAAAACATGCACCTAGTGATGTTTTTATCACCGTGTTGTTAATACTTGCTTGGTTGTCTTTTTTAAAGATGACCCCAAGCACATTTGCTGCCAAACAACTCCGTAAGATTCCACCAAAATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGCACTGTACAATACTTGTGTAAGCAATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGCACTGTACAATACTTGTGTAAGCAATAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [78.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //