Array 1 2228998-2228563 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNWC01000007.1 Coprococcus phoceensis strain Marseille-P3062T, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 2228997 33 100.0 34 ................................. AGATTCATTCGCACAATCATGTTATCTGTAATGT 2228930 33 100.0 34 ................................. TTATGTGAATACAGGGATTGAAGAATTGATACCC 2228863 33 100.0 33 ................................. GTCACCTAGCACAGTTACATCAAGAGCAACTGT 2228797 33 100.0 34 ................................. CAAGAACACGACAGCACTTACAAAGGACACAATT 2228730 33 100.0 35 ................................. CTTTGTAGTCAGAGCTCCTGATGCCGCCAAAACCT 2228662 33 97.0 34 ...........G..................... GTAGGTGTCGCTCCACTTGTAAACCAAAACGGAT 2228595 32 84.8 0 ...................T-.A..T..T.... | G [2228570] ========== ====== ====== ====== ================================= =================================== ================== 7 33 97.4 34 GTCGCTCCCTTCACGGGGAGCGTGGATTGAAAT # Left flank : TCCTGAAGCACATAAAGTTCCGTTTTCCGGTGTATTTTGGAGACAGGGAAACACAGGAACTTTGTTGGGACAACGAAAGTACCGTTGAGACTTGTGTGTTGCTACAACGAAGAGCTATGTAGAAATCCTTAATTTTAGGCACTTTGCGAAGCATTTCGTGTTTTCACCAGAGGGGAAAAATAGTCGCGATAAACACCTCAAAAACTATTTTGATGTTTCGGTGGTTGTTGCTATAGGGTGTGGGAACACAACAAATTAAATACTAATTTCAGGGATACTTGTTAAATATCCTACAGAATTTAATTGTCGAAAATATAGAGAGAATATTAAGTGCGAATGTCTAGTAAACATAGATTTTCTATGGGATTCGCACCAAAAAATAGTTCATATTTAGGTTGAATATGAAATTGATAGTGTGATAGACTTGTAATTATAGAGAAAAATTAGTAGAATTAGCAGAAAGTTGAACGATTGTAACAGAAAAATTAGTCAACATTGCT # Right flank : ATTTGAAGATATATAGAGACAGTCTGTCAGACGAAACGGAGATCAAAGACGTAGAAGAATTGTTAAAGTATTATATCAATAATAGAGAAGGTCTGATAGCGTATCAGTCACAAGGATTAAACTTACCGGAACATCCGGATGGATTGGAATACAGAAACATGGGAACTATGGAAAACCACATCTGGAGCGTGATTGCAAAACGAATGAAGCACAGTCATACCTGCTGGAGTAAACGGGAAAATCATCTGGCAAAGATTCTTGCAAAGAAATGCGGTGGAAAGTTATACGAAGTAACAGAAAAGTCAAAGCATGCCATATTCAAGGAAGAGACCGTGGAAGAAATTCTGATGGCAGAGGAAGTGGCTAAAAAAGTAGGAAAAGGATACGAATACCCTACCATAGGTCACATGGTAGGATTGGAGGGTAAAATAATAGGTGAACGCAAGAAACTGTTTGCAATGTCAGGATTTTAGTAAACAACTGTCAGAGAGAATGATAAG # Questionable array : NO Score: 9.13 # Score Detail : 1:0, 2:3, 3:3, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCACGGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //