Array 1 10211-9710 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLTA01000029.1 Acidovorax anthurii strain CFPB 3232 Ga0074828_1029, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 10210 32 75.0 35 ....T...TT.CCG....A............T ATGGGTACCGGTATCACCACCCTGTGGGGTGGCAG 10143 32 90.6 36 .......T.T.C.................... ACCCTTGCCGACGTGCGCAAGCTCCAGCTTGAGACA 10075 32 100.0 35 ................................ TCCACGAAAACCCGAGAGAGCCGCAGATGCGCCTC 10008 32 96.9 33 ...................T............ GTTGTCCGATTCCGCAACTAGCTTCTTGTACTT 9943 32 96.9 35 ............A................... TCCCTCATCATCACTGTCATCTCCATCGCTTTGGT 9876 32 87.5 36 .....A.....C.C...T.............. GGGAGCGAGAGATCCAAGGTTTGAATCTTGATACTG 9808 31 93.8 35 ......-....A.................... ACCTTGAAGGCGGTCTGTTCGCCCGGCTTCGTGTT 9742 32 87.5 0 ......T......C..A.........A..... | C [9715] ========== ====== ====== ====== ================================ ==================================== ================== 8 32 91.0 35 GTCGCGCCCCGTGTGGGCGCGTGGATTGAAAC # Left flank : TGGTGGGAAGGCGGCCCGCAGCTCGACTTCTACATCAACACCAAGGCCTGGGAAGGCCTGCCGGCCGAGTACAAGGCCGTGGTGGAGGCCTCGGCCTCGCACGCCAACATCTCCATGCTGGCCAAGTACGACGCGCGCAACCCCGTGGCCATCAAGCAGCTCGTGGGCTCGGGCACCAAGCTGCGCCCGTTCACGCAGGACGTGATGAACGCGGCCTTCAAGTCGGCCCAGCAGATCTATGCGGACCTGAACAACTCCAACCCCGAGTGGAAGAAGGTGTACGCCGACTACTCCAAGTTCCTCGCCGACCAGAACGCCTGGTTCCGCTTCACCGAGGGCACGTTCGACCGCTTCATGCAGGCGCAGAAGCTCTGACGCCGGCCATCAAGGCCCTGGCATCCAGGCCCCGCTGTGTAAACGGCGGGGCTTTTTTCTGGACGGAGGCTGGTGGATGCGCTCCGTGCCGGCGCGGGGGGCGGAAGGGGCGTTCTGAGCATGAT # Right flank : CTCGGAAACCCGCACACGTCCATGGCCCGCAGCGCGTTATGCCCGCTGCGGGCCCTTGGCCGTACAGCTCTGCTCAACGCGCGGCAGATTCCCCTGAAGTGCCTCGCTGCCCATCGATCCCCTGCCGCACCACGCATTCCGCGAACCCCGTGAGCAGCGCCGGGTCGGCCGAGTGCACCCAGGTGATGCCGCCGCCGCGCCGCCGCAGGAGGATGCGGGGCGCGATGACGGCCGAGAGGCCGGGCCAGTGCACGATCTTGAAGCTGGCCACGTCGGCGGCGCGCACGTGCTTGTCCCACAGCCACGTCTGCACCAGCGTGCCGTCCGCGGCGAGGAGGCGCGTGCGGCTGAAGACCATCCACCAGCCCACCCAGCCGATGAGCACGGCCGCGAGGGCGAAGGTGGCCAGGCTCGCGAAGGGCCAGTGCGCCCCGCGCAACTCGGGCAGGGAGCGGAGCGCGAAGGCCGCCAGCCCCGCTACGATGACCACGGCGAGCGCG # Questionable array : NO Score: 6.60 # Score Detail : 1:0, 2:3, 3:3, 4:0.55, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCGTGTGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.80,-6.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [16-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //