Array 1 27082-26847 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXZT01000016.1 Ligilactobacillus salivarius strain KLA001 NODE_16_length_41111_cov_4.45492_ID_7011, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 27081 36 100.0 30 .................................... ATACTCGTGGTGTCTAATTATAAGACGTTC 27015 36 94.4 30 .........................G....C..... CGTGCCTTCGATTCCTTCGCTTGGGAGATC 26949 36 100.0 29 .................................... GTCTCAGGAGGAAAAAATCAAAAATATGA 26884 35 91.7 0 .............-..............C.C..... | AC,G [26859,26868] ========== ====== ====== ====== ==================================== ============================== ================== 4 36 96.5 30 GTTCTGAACCTAGGTTAAATGACATAGGTGTAAGAC # Left flank : TTGTGTTTATTGATCGTTGGTCACCAACTTCAAAGCGTTGCCATACTTGTGGTTACATTAAGCACAACCTTAAATTAAGCGACCGTAAGTGGACTTGCCCTATCTGTAATTCTCACCATGATCAAGACATAAACGCAGCTAAAAACATCTTAGATGAAGGCTTAGACTTGCTAGACAAAATGAATGATTCTTGCAAGAAATGTGGGCATGAGCGTACGGTTATTACAACAGACGAAAAGTGGACATGTACAAAGTGTGGAGCTAAAAATAAAACCACACCTAAAGAAGAAAATAGTAGCGATGTAGCCTAACGGTAAGGCAAGGTAACAGATGCAGGTTCGACTCCTACCATCGTTATAGGAGGACGCTTGTTCTCGACAGCTTGGTAAATATCTTTAACCTCTACAGTATCAGTTAGTTAATCTAGCAGAAAGATATTGCAAGTAAGAAGAGTTCCCAAGAAACTTATGTCGAAATTAAATATAGGTTAGAAAACAACG # Right flank : ATATAGAGGAGCCGATCAAAAAAATATTCAACGTTCAAATAACGCTTCAAGCATAACCGATTGCATAAGGGCTTTAATCAAGTCTTATCGGACATCTGCCTGTAATTCGTAGTAGGTATAGTCTGAGTGATAGCTTAGACAAGCCGAGAGATGATTGGTAACAATTATCAAACCTAGTAAAAGCTAGGACGTTTGGTAGGTGTGTGGAAATGTGTGACGTTAGTGCTTTGCTAACCGTTGGCACTGGATAAAATAGACGCTCACGGTGTGAGAATAACCCATTGGCAGCTTAGTGTGGTAGCTAAGTGATGTGATGGGAATAACCAAAGACAGTGTTTGCCTTGACGTTTAGGAAACTAAGCTATAACAACGGAAACAAGAACGAGTAGGGTAATGGCATCGAGATTACAGTAATTTCGCTACTGGACTTGAAATCCACATGCGACGATTAAGACAAATAAAATAATTCTGAATGATTGCCTGAAAGTTGGTACTTATCA # Questionable array : NO Score: 2.68 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTGAACCTAGGTTAAATGACATAGGTGTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.80,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 29445-29013 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXZT01000016.1 Ligilactobacillus salivarius strain KLA001 NODE_16_length_41111_cov_4.45492_ID_7011, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 29444 36 100.0 30 .................................... TTACGGTAGAATGTATCTTCAATTTTTCTA 29378 36 100.0 30 .................................... GCTACTACTCATTGTGAACTTAAACTGGTT 29312 36 100.0 30 .................................... AGTACTAGCGGCTCATCTGCATATATACTA 29246 36 83.3 30 .............TTG..T..........GT..... CATTGAAGTTCGTATGGTGGATATCATCTA 29180 36 86.1 30 ............A.T.....A........GT..... ATAGGTTTAATGATTGCTCCAATGGTTGAA 29114 36 83.3 30 .......G....A.T......G.......GT..... TCACGTTTATGTGAGTGATTATAATTCACA 29048 36 86.1 0 .......G....A.T..............GC..... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 91.3 30 GTTCTGAACCTAGGCTAAATGACATAGGTTGAAGAC # Left flank : AACTAGCAAAAAACAGTTAAGGCTCCTTAATGTTTGTTTTGCTGTTGAAAAAGAAAGTCACATCTAGGGTTACCTAAGCTTGTGGCTTTTTTTATTTTTTAACTTTTTTGAATTTTATTTTAAAAAAGTATACAAAAACATTTGACTTAGAGTGTGAGATAGTGTATCATAATAAACGTAAGGCAAAGGGTTAAGCCTACAGGGACATCAGTAAACTACATGTAAGCCTCTATCGTTCCTGTAAGCATTAGCACAAGCCTTATAATCTTAACTTTATCTTTATTCATTTATGTACATTTTATGTGTAGCGATGCCAAACGGTAGATCAATGCAGGTGCAATTCCTGCCATCGCTATTGGAGGACGCTTGTTCTCGACAGCTTGGTTAATATCTTTGACCTCTGTATAATCGCAAATTGCATTAGTTTGTTTACGATTATGCAAGTCTGAAGAGTTCCCAAGAAGCTTATGCCACAATTAAATACAGGTTAGAAAATAACG # Right flank : TGAAATCATGGGCTTAATTAAAGTCAAAACAACGATGTAGCTCAATGGTAGAGCAAAGCGAGGCGACGTAGGTTCGATTCCTACCATCGTTATTGGAGGGTGCTTGCTCTTCACAGTTTGGTTAACATCTTCGCAAACAAAGTTGCTGATTGCATTTCTTTGTTGAAGAGTTCCCAAAAAGCGCTGATAGCACAAATAAAGACGTCCATTGTGGAAGACTAATGTAGTGTAGTCAGCTGAAAGACTATACATAAATTACGTTGGTGTTTAAAAAGGAGTTGGAAAAAATGGAAGAAAAAGTTTTAGAAAGTCGTAGAATTAGAATTTATCCTACTAAGGATCAACAAGCATATTTAACGTTTAATATGTTTGCTAATATCAAGATGTGGAACGCATTACTAGCTGAAGTTTATAAGCCAGTTAGTGAGTTAGATGAAGTTCAAGCTTTACCTAGAAACAAACAAAGTAAAGAAGTTTATAAACGCATTGAAAGAATGTCA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:0.56, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTGAACCTAGGCTAAATGACATAGGTTGAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //