Array 1 1785893-1786862 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP072224.1 Bacteroides thetaiotaomicron strain CL11T00C24 chromosome, complete genome		Array_Orientation: Unconfirmed

  Position	Repeat	   %id	Spacer	Repeat_Sequence                                	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	===============================================	==============================	==================
   1785893	    47	  85.1	    29	...C.T.....T.....T........T......T...C.........	TATAAAATCAAAATAATGAAGATATCAGA 	A,A,G [1785896,1785899,1785902]
   1785972	    47	 100.0	    29	...............................................	TCATTCTCGTGGTGAAAGACGGCGTAATC 	
   1786048	    47	 100.0	    30	...............................................	GTTCCAAAGCGTAGGTTTTTTCCTGCAAGG	
   1786125	    47	 100.0	    30	...............................................	ATCCAAAGGTATATATACCTCCGCTTGGTA	
   1786202	    47	 100.0	    30	...............................................	TGGGGTTGATGGTTGGTACAGTGGAGTGAC	
   1786279	    47	 100.0	    29	...............................................	GTGTTAGGAATACTAATTGATTCATAGAT 	
   1786355	    47	 100.0	    30	...............................................	TTCGATGTTGCAAAGATACGGCTTTTATTT	
   1786432	    47	 100.0	    30	...............................................	TAAGATCAATCTTAAACGTATCACCGGGAA	
   1786509	    47	 100.0	    30	...............................................	CTTTGGATATTTGACAGTCGACACGACCAA	
   1786586	    47	 100.0	    30	...............................................	TCTTCTGCTCGGCTGAATCGGCGACGGTCA	
   1786663	    47	 100.0	    29	...............................................	TCCATGAGTAGCATACATAATCTTTCCCT 	
   1786739	    47	 100.0	    30	...............................................	ACTAGGTGGTCTATTCAAAAGAAACGATAA	
   1786816	    47	 100.0	     0	...............................................	|                             	
==========	======	======	======	===============================================	==============================	==================
        13	    47	  98.9	    30	GTTGTGATTTGCTTTCAATTTAGTATCTTTGAACCATTGGACACAAC	                              	       

# Left flank :   GAGCAGATCATGCAAAGTGACAGTAGCCTGATTCAACAGACCGTAGGGACAGCTTTCGATATGTGGCAGAAATTCGCATTTACCATCGTACTGATTGCTTCCTTCATCTTACTTTATCAGAAGGCTAAGTTCCAGAAAACCGTTTCCAACCTGCGCTTTTACGGAAAAATGAGTCTGACTAACTACATCACACAATCTATTATGGGAGCTATCATCTACTTCCCATTCGGATTTTATCTGGCTCCCTATTGCGGATATACGCTCAGTCTGATTATCGGAATCATTCTGTTCCTATTACAGGTACAGTTCTGTAAATGGTGGCTGTCGAAGCACAAACAAGGACCATTGGAAACCATCTGGCATCGATGGACTTGGATAAAGATAAAGAAAGGGTAATAGACAAAGTATAATCTCACATCATTAGCAATTTAACATCATATGAACAAACTACAATACTTGAGGCAGCAGAAATAACAGGCAGAGAAATATAACTAAAATTT
# Right flank :  CTAATTATCACTTACCCATTGTGAATCAACAATTTACAAAGAAGTTCAGAAAAGAAAAAAGAGAGTTGTTTCCATCAAAAAATCCCGCGTCAATGCGGGATTTTTATTTTAAAACAGTTCTAATTGCTGTCCTGGTGAATTCACATTTTGGATTTTCTTCCCATAAAAAAGCTCTATGTCCCCAAATTGTTTATCCGTAATACACATAATTCCAATCTGCCCAAATTCAGGGAGAAAAGATTTAACTCTTTTTATATGCACCATTGCATTCTCACTACTAGCGCAATGACGCACGTAAATAGAAAACTGAAACATCGTAAAACCATCCTTTTGCAAATTCTTTCTGAAATCCGCATAAGCCTTCTTATCTTTCTTTGTTTCAGTCGGCAAATCAAAAAGAACAAGTACCCACATGACTCGATATTCACTAAATCGATCCATTACCGTTCAGGATACGAAATTCGACGAACTTCCCCACTGAAACATTTATAAAGCGATGC

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTGATTTGCTTTCAATTTAGTATCTTTGAACCATTGGACACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:65.96%AT]
# 	Reference repeat match prediction:         F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-1.30,-1.50] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         NA [4.5,4.5   Confidence: NA] 

# Array family : II-C [Matched known repeat from this family],   
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