Array 1 70932-70032 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABHNK010000008.1 Streptococcus gordonii isolate Streptococcus_gordonii_SS_Bg39, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 70931 32 100.0 35 ................................ GGCAAGGAGCAGTTAGCTACATTTATCCAAAATAA 70864 32 100.0 35 ................................ CAATCAAATAACAACATTGCATCACGTTTTAATTC 70797 32 100.0 33 ................................ TGGTTTATTAACGGATGCTGAAATGCAGATTTT 70732 32 100.0 34 ................................ TTAAACATCGGGCGTCAATGAGTCCTGCTTTTAA 70666 32 100.0 36 ................................ TGCAGAAACAGAACGACGTTTTTTGAACCACGTTAC 70598 32 100.0 35 ................................ ACAACTAAAAACGGAGTTCCTATTCAAACTAACTC 70531 32 100.0 35 ................................ ACAAAAAGAAAAAGAGGTTGCAGAGTGGCTAGCCA 70464 32 100.0 36 ................................ AAAGAATATGGGATAATAGAAATAGATAAGTAGGGC 70396 32 100.0 35 ................................ ACTACTTGGCCAGCCGGTGAATAATACCAAGTATC 70329 32 100.0 33 ................................ TAAAATCCTTGGTAAAGTATATGGAGAATTAAC 70264 32 100.0 35 ................................ TTTTTGCCCGACATAATAATCCATGAATTGCTCAT 70197 32 96.9 35 ..................A............. CGTACACTACACTCACTTCCATGTTACAACGTGGC 70130 32 96.9 34 ..................A............. TGGGCTGTCGTTACCGTCGTTGAGAAGTGCTAGA 70064 32 93.8 0 ...................T.....C...... | T [70034] ========== ====== ====== ====== ================================ ==================================== ================== 14 32 99.1 35 GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT # Left flank : CCAAAGCAATCCGTGGAGAATTAGAATCGTATCCACCATTTTTAATCTAGGAGTAGACTTATGATGGTTTTAGTAACTTATGATGTTAATACGGAAGAAACAGCAGGTAGGAGACGTTTACGACATGTGGCAAAACTTTGTGTTGATTATGGTCAACGTGTACAAAACTCAGTTTTTGAATGCTCATTAACTCCAGCCGAATTTGTAGAGATAAAAAATGAACTATTAACAATCATTGACCAAGAATCAGATAGTGTTAGATTTTACTTACTTGGCAAAAATTGGCAAAATCGTGTTGAAACGATTGGTCGAGATGATAGTTATGACCCTGATGTGGGGGTATTGCTTTTATAAAAACTTGTGTGCGAGCCTAGGTTACACATCAAAACCTGTGACATTCGCGCATCAACTTAGAATTATAGTGGCAAAAACCTCGTTTTATTGGGGAAACTAGCTCAATAGATTCTTGATTTTAGCCACAAACAGTGTAACTATGCGCT # Right flank : GCTTATAAGCCTTTGCTCCCTTTCAAAAAGTATGCTACATTTTTTAAGTGTCTTAGTCTTTGACAATGCTAAAATTTTGCAGAAGTGTCCTGAAATCTTAACAGTATTTTTTGAAATTCTCTTACTTGGTGGAAAGAACGATTTACTTAGTGAGAGAGTGTACCAAAACTTGAGATTGGATAAATAGCGGTCCCACTTACATCAACATCTGAGGTCAGAAAGGTTCTTACTTAGTGTATACATTTTAGGTGGAGTACCTGAAATAAGAAAGTTACCAACATCTTCCAACCTCCCCACCCATCAAAAAAGAACAGCTCTGTTTGAGCTGTTCTTTTTAAACTGTTAGCAAATCCGAATTTAAAGTTTGTATTGTGTATATTTCTCAACTTCTAAACCTCAAAATTATAGAGAGCGGTTGAGAGGTAGCGCTCGCCATTATCTGGAGCAAGAGCTAGGACTTTTTTGCCTGTGCCTAGTTTTTTGGCGACTTCAAGTGCGGC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.60,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //