Array 1 2222893-2221618 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_018016.1 Ornithobacterium rhinotracheale DSM 15997, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                                	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	===============================================	==============================	==================
   2222892	    47	 100.0	    30	...............................................	CCTTGCTACCACGATATAATTAAATATCGT	
   2222815	    47	 100.0	    30	...............................................	TTGTTCTTTTAATTTAGCTTGTGCTTTCTC	
   2222738	    47	 100.0	    29	...............................................	GTATGAGGTTATTAATTAATCGAGAAGAT 	
   2222662	    47	 100.0	    30	...............................................	AACTCTCTCTTGCAGTAATATCCCCCTATA	
   2222585	    47	 100.0	    30	...............................................	CAGTCTTCCATCACTTTGCTCTTTTAGATT	
   2222508	    47	 100.0	    30	...............................................	TAAATAGTCTAAACGAATCTTTTCAAGTTT	
   2222431	    47	 100.0	    30	...............................................	TAGGACCAGATTTAAACACTTCATCTGTTT	
   2222354	    47	 100.0	    30	...............................................	CCTGCGCTGTGGCTAAATCTTTTGCGTGTT	
   2222277	    47	 100.0	    29	...............................................	TGTTGTAAGTCCACTCGCAGGGAATGCCA 	
   2222201	    47	 100.0	    30	...............................................	ACATAAACATCCGTCACATTCTGACCATTT	
   2222124	    47	 100.0	    29	...............................................	GGTGTTGGTTATCACCAATTAAGAAATTG 	
   2222048	    47	 100.0	    29	...............................................	TATGTGCGTTAACTTAGCTTCTGAAATTT 	
   2221972	    47	 100.0	    30	...............................................	GAAATTCCTCGTCAGCTTCAAATTCTATAA	
   2221895	    47	 100.0	    30	...............................................	CCATTTTTAATCTATTTTAATTTACATAAA	
   2221818	    47	 100.0	    30	...............................................	TAACCTAAGTTTAATCCTGTGATCCCTTCG	
   2221741	    47	 100.0	    30	...............................................	TAGATATTGTTTAGCCGTTAAGCGGTTCAT	
   2221664	    47	  87.2	     0	.........................T..T....G.C.T...T.....	|                             	
==========	======	======	======	===============================================	==============================	==================
        17	    47	  99.2	    30	CTTGTGATTACTCACACAAAAATAAGAACTTGAAAGCAAATCACAAC	                              	       

# Left flank :   AGAAGGCTCTAGAAGAAAAATCGCTTATCCTGAATTTTGCTAAACCTATGGAAGAACTTTTCACTCGCTTAAACCAATATCGCTCTATGTGGATTCTTGTATCATTTGACCTGCCTACGGAAACCAAGCTCGACCGTAAAAGAGCTAGCAAATTTAGAAAACAATTGCTAGAAGATGGATTCTCTATGTTTCAATTTTCAATTTATATGCGATTCTGTTCAAGCCGAGAAAACACAGAAGTGCACATAAAGCGAGTAAAAGACATTTTACCCAAACATGGGCGTGTAGCCATTTTTAGAATCACCGACAAACAGTTCGGTATGACAGAAATATTCCATAGTACCAAAGAGGTGGAAAAACCACCCATGTACCAGCAATTGGAACTTTTCTAGAATTAAAAAAATTATCAAAAATTTACTTCAAATAAAAAAAGGTTGCAGATTTCTATAATCCTAGCAACCTTTTCAACTTTTTGATTTACAAGCAAAAACAAGAAGTAT
# Right flank :  ACCCTACCCCATCTCCTTGCCTTGCATCGACTTGTGATTACTCACACAAAAAAACCCGTAGTGCATTATAAAAAAGGTTGCCCATGAGCCTAAAGAAAAGTAAATTGCATTGGTTACCAATCAAATACAATTATGAGCAATCTAGAGGCAAGTTACAATTTTATTTTGAATAAACTAATAGAATTTTCAGGAACTGAAAATTTCTATTTTAAACCAGTGAAACCAAAATTATCTGATATAGAGCTGATAAGCTTAATTATTTTAGCAGAATTTAAATCTATCGATTCTGAGTACCAGCTTTTTAGAGAGATAAAAGGTTGGGCTATTGAATCTAAAATTGAAAGGAGTGTTTACAACAGAAGAAAACGAAAACTCTTCCCTTTTCTTGAAGAAATTAGGTGCAAAATGGTGAAAAAGTTCAATGATTTTGAAAACTATTTCTTGGTGGACAGCATGCCTTTAGAAGTGTGTAAATTATCCCGCTCTTCCAGAAGCAAAAT

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTTGTGATTACTCACACAAAAATAAGAACTTGAAAGCAAATCACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:68.09%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-4.40,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [6-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,0.68   Confidence: LOW] 

# Array family : NA
//