Array 1 119562-121154 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZYJ01000002.1 Enterobacter roggenkampii strain 42192 contig2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 119562 28 100.0 32 ............................ ACGGAATATCCAAATTTCCAGCAGGACTGTAA 119622 28 100.0 33 ............................ TGGAGTACCTGAAGAACCAGAACGACGCATCAA 119683 28 100.0 32 ............................ TCGCCGCCTTTGGCGTTTCAGGAGCATATAAA 119743 28 100.0 32 ............................ CCGGCCCTTCTCGCCGTCCAGTGTCGCCGACA 119803 28 100.0 32 ............................ CAGCGCGGCGAGTTTTATGATTGTTCTTCGTT 119863 28 100.0 32 ............................ ATATTCACCACAGCCGAAATAGCGAATTTTAT 119923 28 100.0 32 ............................ AAATAAGGAGAGCAGTTTTGGTAGTGCTCAGT 119983 28 100.0 32 ............................ AGATGCCTCCGGCGGCGCTACCGCGGGTTGCT 120043 28 100.0 32 ............................ GCCCACGTCGCGCAACCCGCGGTGGCTTTCGT 120103 28 100.0 32 ............................ ATTCTGGTACCCATAAACGAAACCGCCCACGT 120163 28 100.0 32 ............................ GCCAATAGGGCGAAGAGCAGGGAATGACTCAC 120223 28 100.0 32 ............................ GATACCTGGAACAACAACCGGAGGGATTTGAA 120283 28 100.0 32 ............................ ATGATGACCAGCACGGTCTACTGTGTAATAGA 120343 28 100.0 32 ............................ ATAACAGCATGGAACTGAATATAGTCCTTTTT 120403 28 100.0 33 ............................ TGAACGAATTCACACCGCCGCCGATCACAGCGA 120464 28 100.0 33 ............................ GCGCGCAGGCGCGCCGGGCTACCTGCGGCCAGA 120525 28 100.0 32 ............................ CTAAACATTGATGGCAATTCACGAATAAGCCT 120585 28 96.4 33 .......A.................... TCCCATATGTCCATAAATCCACGCAGCGACCTC 120646 28 100.0 32 ............................ GTTATCAGGCTGCCTGTGCAGTATGGTCATCA 120706 28 100.0 32 ............................ AGGAGGAGCACAAGGGGCGGCGACTGAAAGTT 120766 28 100.0 32 ............................ ATGGAGATTCTCAACGACCAGCTAAACCAGGA 120826 28 96.4 32 ..........A................. AGGAACAGGCGTTTATACATCGGCTTGATAAA 120886 28 100.0 32 ............................ TCGTAAACTAATGACCACACTGGAGGGTTTAT 120946 28 100.0 32 ............................ GTGCCTCTGGCTGATGCGCTGGCGCGCATCCT 121006 28 100.0 33 ............................ ATTCCGACAAATCAGTTAACCCTGGTGACGAGC 121067 28 100.0 32 ............................ TCTGTAGCTTGCCGCCAAAAGAAGGCCGACTA 121127 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 27 28 99.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ATGGGTTGCATAAGCTGTTTGGCGGGGTGGGCTTTATCAGCGGTATGCTGGTGGAGAAAGGGCTGCCGGGGTTTATTGCCTACGGCGTGTTGATTGGCGAGGTGGTGGCGCCGCTCCTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATCGTGGCGTGGCTGATGGTGGGATTGGATGAGACATTCGCGCTCGACAAGGTCGGCGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATCGGCTCGCTGGCAGTGGCGTTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAGCACCTGCGTGGCGGTAGGGGTTGGAATCTGTTCCGAGGGAAGGGGTCTACGGACCCTTTTTTATTGGTGAGTTTTAAGTTGTTGATTTCACAACGGTGAATTGTTGGTGGGGAAAAAAGGGTTTACGGAGAATTTTAGGGGGATTTCTTTATATCACAAGAAGATAGGTGTAGATTGTTCCA # Right flank : AGCACTTCAGCCGGGTAAGCGTCGGTGGTTAGGGTCGAATGCCGAACAGGCAGTAGGCACAACGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACGAACGAGCGTTTATTGTTTATGCGAGGACCAGATCGCCCTGCGGATGGCACGAGCACGCCAGCACGTAACCCTCGGCAATTTCCGCGTCGGACAGCGTCATGGTGCTGGTGACGGTGTACTCCCCGGAAACCACCTTTGTTTTACAGCAGCCGCACACCCCGGCACGGCAGGCCGCCGCCACCGGTACGTTGTTGCTTTCCAGCGCCTCCAGCAGCGTCGTGCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGCAGTTTGGTGAACTGAATCCCGCTGGTTGCCGCTTCCGCCACCGGCGTGAAGAACTGCTCTTTGAAGAAACGGGTCACGCCTAGCGCTTTCACTTCTTCTTCCACGATAGCCATGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 136021-136650 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZYJ01000002.1 Enterobacter roggenkampii strain 42192 contig2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 136021 28 100.0 32 ............................ AATCGCCATTTCGATCCCGGTGCTGGCACCGC 136081 28 100.0 32 ............................ GCTTGCTAACCCCGGCCAGGCGGGGCTGATTC 136141 28 100.0 32 ............................ AGAAATTCATGGGTGAACAAACTAACCCAGGC 136201 28 100.0 32 ............................ AGAATGTGTACGCCAGGCAGTTAGGGGGCTGG 136261 28 100.0 32 ............................ AGGCTGCTCAGGTGCCACAGCAACAGACACCT 136321 28 100.0 33 ............................ GCTTACTGCAGAAGTTAGAAAATGATCCCCGCC 136382 28 100.0 32 ............................ TGCGACAAGTGCCAGATATCAAGCGACTGTGG 136442 28 100.0 32 ............................ CGTGGCCGTGCGGTCACGGCGAAGCATCTGAA 136502 28 100.0 33 ............................ CGTACTCAGGTGAGATTAGTGGCTTCACATCAT 136563 28 100.0 32 ............................ GCGCAGATTGCCGCCCGTCTCGGACGAACAGT 136623 28 75.0 0 ...........C.....T...AC.ACT. | ========== ====== ====== ====== ============================ ================================= ================== 11 28 97.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCGCAAACGCAGCCCGTTTGCCGCTGTCTCGGAGCCTGGCTGGAAGAGGTGAAATCCGGCCTCACAGAATCAATGCGTGATTTTCAAGTGTTGGAATTTGAGGACGAAGCGGAAAAACCGCGACAAAAAGAGTGGTTGCTGGAAGATACAGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTGCTGGTGTCGCATTTTGACCGAGATATGTTGCCGCACCTGACGGGGTTGCTGCATGACATTACGCATTCAATGGCCGCGGATGTCGTTGCACCTCAAAGTGCAGAAACGGTAATTCACATTATTTCCTGAGTGCTATCTGAGGCGTCGGGGGTGTTCCTCTAACGCCATTGGTTTAAACCCTTTTTTCTGATGCTTGCGTAAAATATTGATTTATATGGTTATAATTTACGTCCCAGAAAAAGGGTTTTATGCGAAAAAGTTGATTATTTTGTTTGCTAACAATAGGATGGCGTTGTTTCCTTTCA # Right flank : AAAAACAACTCTCTATAACATTCAGCTTACCTATTTAAAATTTAATACTATCAAACCCACATTCTTTATTTTTCGCAATAAATAAAAAATTCATTCACATACCAATTATATTCTAATGAATATATTGTTCGTAAAAATAATGCATTAAATGGAAAAGTGATTTTTCACTTTATTATCGCGGTAATTACTCTTCATTTGATACCCGTCACATTTGTTTTCATCTTATCTTCGATAACATACCGCGCATTCAACACCTTGAAATAAAAGCCCTTGCTATGTCCGTAAACAGCATCACTCCAACAGACTTAAAAACTATCCTGCATTCAAAGCGCGCCAATATTTATTACCTGGAAAAATGTCGCATCCAGGTGAATGGTGGGCGCGTTGAATATGTCACCCAGGAAGGCAAGGAGTCGTTTTACTGGAATATTCCCATCGCGAATACCACGGCAGTGATGCTGGGAATGGGAACATCCGTTACACAAATGGCAATGCGGGAG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 146147-146595 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZYJ01000002.1 Enterobacter roggenkampii strain 42192 contig2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 146147 28 96.4 32 ...................T........ AACCCTTGCGCACCTTGGTGAACAAGCGGTGT 146207 28 100.0 32 ............................ TTCGCAGAATGCGAAGAATCGGAACCAGAAAC 146267 28 100.0 33 ............................ GTATATGAATCCCCCATTTGCCAGGCAAGCGGT 146328 28 100.0 32 ............................ TGAGAAGTACGAAGCAGAGTATGGAAAGACAC 146388 28 100.0 32 ............................ ATGCGCGGACAGAATATGTCAGCAGAAACCGC 146448 28 100.0 32 ............................ GCTGGAATCAAAGTGATGGAGTGAGTATAAGG 146508 28 82.1 31 A...A......C...C......C..... ATAGAAAATAAGGCCTAACAGTCCTCGGACC C [146532] 146568 28 71.4 0 ....A...T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 8 28 93.7 32 GTGCTCTGCCGTACAGGCAGCTTAGAAA # Left flank : AACGGGCCACGCGTTCGCTCTCGTCGGGCGTTAACGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTGATACCCGTGACACGCAAAATGTCCGCTTTCGACATGGACGTCCACTCGTGGATGTTGTCGAGCACGCTGACGGGTAATCCCTGATTGAGAAATTCAATCAACCGCATACCTCGGTTGGCGGGTAAACCGGCGTAACGCCAAAGTGCGTTATCAGCAGGTTTCTGTGCGGGGATCCATGTTCTCATGTAACCTCCTGAGTGATGTCATTTGTCATGGTTAAGTATAGCCATTTGTCAGGGTGGGTGGAATGGGTGTTTTTGTGTGGGGGATTAATGCGAAGAAAGGTGTTTTGACCCTAATTTTTAGCGTTTGTGTAATAGATTGATTTTAAATGATTATTTCTGGTGGATGAAAAAGAGGGTGAGAGAAGGATTTTTAGCTTTTTTTGTATGCAAATCATAAGGGTGTGGAGATATTATTTCA # Right flank : GCTGGAACGAACGGCTAATTAATTGTTCAAATAATCAACTGCGACACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTGAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGATACAAC # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //