Array 1 1115351-1119278 **** Predicted by CRISPRDetect 2.4 *** >NZ_PWAI01000001.1 Klebsiella pneumoniae subsp. pneumoniae strain WCHKP020117 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1115351 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 1115410 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 1115471 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 1115532 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 1115593 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 1115654 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 1115715 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 1115776 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 1115837 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 1115898 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 1115959 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 1116020 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 1116081 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 1116142 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 1116203 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 1116264 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 1116325 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 1116386 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 1116447 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 1116508 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 1116569 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 1116630 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 1116691 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 1116752 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 1116813 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 1116874 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 1116935 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 1116996 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 1117057 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 1117118 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 1117179 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 1117240 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 1117301 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 1117362 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 1117423 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 1117484 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 1117545 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 1117606 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 1117667 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 1117728 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 1117789 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 1117850 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 1117911 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 1117972 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 1118033 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 1118094 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 1118155 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 1118216 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 1118277 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 1118338 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 1118399 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 1118460 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 1118521 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 1118582 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 1118643 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 1118704 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 1118765 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 1118826 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 1118887 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 1118948 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 1119009 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 1119070 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 1119131 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 1119192 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 1119250 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //