Array 1 796137-795442 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZPL010000001.1 Streptococcus oralis strain 34 Soralis_34_DanaHsu_Sia_YES_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 796136 36 100.0 29 .................................... TTGTCTTGAATGCCCTTGATATATTCAAG 796071 36 100.0 30 .................................... AGGTAGTCCGGTGAGTGGATAAATTAACCC 796005 36 100.0 30 .................................... TTCTCCTGTCTCTGGGTTTACGTCTTCATA 795939 36 100.0 30 .................................... ATTTGGCTGGGTCTATAAGTATTTTACTGG 795873 36 100.0 30 .................................... CCGCAAGGATTGAACCTTACGAGATTAAGA 795807 36 100.0 30 .................................... GGATTTCCGTGCCAGGCTTTCTCGATTGCA 795741 36 100.0 30 .................................... ACAAGACCTAATCGATTGGGACATGGATCC 795675 36 100.0 30 .................................... ACTATCAAGCTGCCCACCAACTGCGTCACC 795609 36 100.0 30 .................................... ATCAAAAATATTCATTATAACCCTCACATA 795543 36 100.0 30 .................................... AGCTACAAGCGATATGAAGCGCTGTTGCGT 795477 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 11 36 100.0 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : GGACGATTTTCTATCCTATAATGATTTTGTTGAATGTTGTGAGAAAATGGAGTTTCTGACTAATCATAGCGATTCATTATATATTGTTTTATTTCCTTCCAATGAAGGTTATCTTCATGTCACGAAAGAAGTTTTAGAGGAAATCAATATTGTTTCCGATTATGTTTATCATTTTTATTCGCTAGAATTTATGTATAATCGCTTTACCAATCAGTATCCAATAAATCAAATACCTGATGAACAAGAATTTTTAACTTCTTTAAGAAAAATTGGATCATATTTATTTAGCTCGGACATTCTCCACATGAGTTTATCTGTAGAAGATCAAGTAGCATTAAGAATTTTGAATAATTTGTATCAGTACAAAATGAAAACAAAATTCCGTATTGAATCAGTCAATCCAATGTTATTGAAATATTTGGAAGAATAGTATTGACGAGTGAGATTTAAGGCTTTATAATGTTTTTGAGGGAACAAAAATCAAAATTGACGAATTTGAG # Right flank : GGTCTGAATTAGATCTAACTCAGCAATCGGAACGGAAACGCCCTCTTTAGCTTCTTAAGAATAAGCTCACCAGTATGGTATAATGTCATATAGTAGCGATCAGAGAGGAAAGGAGCGGAAACGATGCTAGCTATTGTTATTGATTCTGTAGGTGACAAGTCAGGGACCTATAAGTTGTTAAGAAACCATTCATCCTTGCCTTTTTCTTTAATCCAATCCAGAATCAAAGATCATGACGCGGTGATAGAAGTATACATGTTAGATTTGGATGGATTGAGAAAGGTTCGAGAACTCATCCATGAGTTGAATACCATTGGAACCAAGGTTACGATAAGAGATTCGACTGGTATTATCACCTTAGAAATAGTAAATAATCTTATTTCTACTTTTGAAGAGATTGCGGCAGAGAGAGAAGAACTGGATGCTCTGATGTTTGAAGAGGAAGAGTGAGTGCCACGTTTTTCAGTGGATCACCAAGTTAGTTTTTTAGTAATAGAAGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //