Array 1 1379-12 **** Predicted by CRISPRDetect 2.4 *** >NZ_ABXP02000121.1 Caldanaerobacter subterraneus subsp. pacificus DSM 12653 seq0122, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 1378 30 100.0 40 .............................. TATTAATACAATGCTTATCAACAAGCGTTCTCATACCCTG 1308 30 96.7 35 .............G................ ATTTTAGGCTTATATCTAATGTAAGGTCCTTCTCT 1243 30 100.0 36 .............................. CTGTAAATTCTGCGTCAATAGGTTCTTGTTGTTGCT 1177 30 100.0 37 .............................. TACAGATTTTAGGTGTATTAGGTGCTGCATACCCTAG 1110 30 100.0 35 .............................. AATTAAAAGCATTAAGGTTAGAACACAATTTAAAA 1045 30 100.0 40 .............................. GCGTTGTGTTCGGCTTGCAGTAGCGGCAGTCGATACACAG 975 30 100.0 38 .............................. AATGAGAACGGACAAGAGGAGATTGTAGTCAAAGGCAA 907 30 100.0 37 .............................. TTATGAAAAAGCTCAAAAAATTTATCTATCATTTTAA 840 30 100.0 38 .............................. CATGGAGAGGAGAAATATAATAAAGCCGCTGAATGGCT 772 30 100.0 35 .............................. TATCTTCCCAGAAAAGTGGACATGGTTCTTGTTCT 707 30 100.0 40 .............................. ATTTTAAAGCCAGTTCTTGCAGTTTCTTCATTTCGTCAGC 637 30 100.0 35 .............................. GATAAAATGCTCGATGAATTTAGAGAAGCGTTAAA 572 30 100.0 36 .............................. AACAGCAAGAAGCGCTAAAACAAGAGTTGCAACTAG 506 30 100.0 37 .............................. TGTAATTATGGACGAATTACATGCTGTCAGAGACAGA 439 30 100.0 36 .............................. AGAGAGCCAAAAATGAACCTAATTTTTTACCTACAG 373 30 100.0 37 .............................. TGTAATTATGGACGAATTACATGCTGTCAGAGACAGA 306 30 100.0 35 .............................. TCGAAAATGATGAAGGATATCAAGCTTTGGAAGAT 241 30 100.0 37 .............................. CATGCAGCCTGGCGATAAGGCAGTCGTCTTCAGGTTG 174 30 100.0 37 .............................. TAGAATAGCATTCCTGCGTCTTGTCTTTTTCCCTGTA 107 30 100.0 36 .............................. TTCCAACTGCTGTAATTAGCTTGCCGACGACTAATA 41 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 21 30 99.8 37 GTTTTTAGCCTACCTAAGAGGGATTGAAAC # Left flank : CC # Right flank : CATATAAGCCCA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGCCTACCTAAGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [11.7-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : NA // Array 1 50776-35581 **** Predicted by CRISPRDetect 2.4 *** >NZ_ABXP02000122.1 Caldanaerobacter subterraneus subsp. pacificus DSM 12653 seq0123, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 50775 30 100.0 38 .............................. TCAGCCATCCATCTAAGAACTGGATTACCGCCATGAAT 50707 30 100.0 36 .............................. AAGAAATGGTGGTTTTGGTTAATTGTAGTGGTAGTT 50641 30 100.0 39 .............................. GTTAAAGAAAAAGAGATTGCAGAAGAAGACTATAAAAAG 50572 30 100.0 37 .............................. ACGATTGCGAAAACTTCATACCTATATTTTCCAAATT 50505 30 100.0 35 .............................. TCGGTTGTTAGCTTATCTAAACTTCTTACTGTGGC 50440 30 100.0 38 .............................. AACTGGCTGTTGAATTGTGATTCTATGCCTTAAATCAC 50372 30 100.0 35 .............................. CTGATACGGACGCTGAAGAAGTGATTTTCTATCAG 50307 30 100.0 37 .............................. TATATCATTTTTAATTGTATTATATTGAGACTGAGCA 50240 30 100.0 37 .............................. GTGTGAAAAGCTATGGTTTAATTTCAGGCAAAGATTT 50173 30 100.0 36 .............................. ACTTTGGTTAGGTCATTTGCTTTAAGAAATTCTTTC 50107 30 100.0 39 .............................. ACTTTTTGCCAGGTGCTATTTTACCGTCCATCGTCTTGT 50038 30 100.0 36 .............................. AAGAAAAAATTGGTTGAACTAAAAAAAGAACTTGAA 49972 30 100.0 35 .............................. CTCCTTATAGAGGCGGGTATACCATACAAAGAGAT 49907 30 100.0 38 .............................. CCTGTAAATACGACCTCGCCTGTTAATATGTCTCTGTG 49839 30 100.0 39 .............................. AGAGTAGCGGCTTTAAGAGCTTCCATTACAACTAGATTT 49770 30 100.0 35 .............................. ATGTTAAATTTCTTTCTTTTCTTAGTTGTTTTATC 49705 30 100.0 36 .............................. CTGTATCTGGAGGTAAAGGAACTTTAAACATTCTCC 49639 30 100.0 36 .............................. TTCGATAAAGACAGCAGTGACAGAAGCAAGTTTGAT 49573 30 100.0 36 .............................. CTATTCATCACTATTGGAACAGTTAGAGAAACTGTT 49507 30 100.0 37 .............................. GATAAAAGCTTATGGTATTTTACAGGATGTCTATGTG 49440 30 100.0 37 .............................. CTGGTACTTCCCGACTTGCAGGAAGAAGAAAAATGAT 49373 30 100.0 37 .............................. AAGGAAAAAATACTTCAAAGTAAAAATTATAAATGGG 49306 30 100.0 37 .............................. CTATAGTCTCCGCTAATACTCTTACGCATGCAAAAAC 49239 30 100.0 39 .............................. CCAGTCTAAAAGTTCAAAAGGTTGCCCGGCCCATTGCCC 49170 30 100.0 36 .............................. CAGTTACACATGACGCAGACAAAAAGAAAATAAAAA 49104 30 100.0 35 .............................. ATTTTTTATCTTTTTTGCTGGCATTCTTGGGGATT 49039 30 100.0 38 .............................. TTCATTAGTCATCTCACGACTGACAAAATATATATTTT 48971 30 100.0 39 .............................. TCTGATTTGCTCTTCTATACTAACTAGGTCTAATGAATT 48902 30 100.0 38 .............................. CCATTTTTCTCATCTCCTTTAAAGCGTATCTCATGCTT 48834 30 100.0 35 .............................. TTTAAACGTCATATTTACGCCTCCTCTACCCAGTC 48769 30 100.0 36 .............................. TATACCAACAAAACAGCCATCATAACCTTGTTTCAA 48703 30 100.0 37 .............................. CCAGCCACCAAGGACCAATCTTCTTCAATCTCTTCAA 48636 30 100.0 38 .............................. TTCAGTGTCGTAATAGGTGCTTCTGCAGGAGAAGACGG 48568 30 100.0 38 .............................. CTAATAGCGACCTGACAAAGCACATCAATCATTCTTGA 48500 30 100.0 35 .............................. ACAAATAGTTGGACGCAATTAGCTAGCCCTCCGCA 48435 30 100.0 36 .............................. TATAAATGAACGTTTGTGCTAATCATTTTCTCCCCT 48369 30 100.0 36 .............................. CTCGTCCAGCCGCAACACGCACATGGGCGGGGTGCG 48303 30 100.0 38 .............................. GTTTATACTGACCGGCTCAGGGTTAGGGTTAGGCACTT 48235 30 100.0 36 .............................. CTTGTGACATTCCCGATGAATCCTTTGGCGCAGGTA 48169 30 100.0 39 .............................. ATTTATCAGACATGCAGCATCAGGCAATGAAACTGATTA 48100 30 100.0 35 .............................. ACGATCTCCGCATAAGCAACCGTGCCCGTAGCGAT 48035 30 100.0 36 .............................. GCGTAAGTAAGGAGGTAAGGTAAAATGGCGAATTTT 47969 30 100.0 39 .............................. TCTACATCAAAGCCCAAACCTTGCGTTAACACAATAAAA 47900 30 100.0 35 .............................. AGAGTTATTGTACTTGGCCCCTCTGAAAAGCGTAG 47835 30 100.0 37 .............................. GCAATATGTACGTGGTAGATGACTTCTCCCTCTTCTT 47768 30 100.0 37 .............................. AACCATACCGCTTGGCAAACAAGATGGAATCCTGATA 47701 30 100.0 38 .............................. AGAAAAATTTCTGCAATTCCTGATAGGTATGTTGTTGC 47633 30 100.0 36 .............................. AAGTTTACAACAGAGTCGTTGGAAGGTAGAGTCCAC 47567 30 100.0 35 .............................. AACCATACCGCTTGGCAAACAAGATGGAATCCTGA 47502 30 100.0 36 .............................. CCTAATGTTGATACTTCTGTTGATTTGAGTCAGGAT 47436 30 100.0 35 .............................. TTGATTCCTGGGATTGGGATTGCAAAACATACCTA 47371 30 100.0 35 .............................. GGCAATGTTTATACTGCTGTTGTTAATCTTTCTGA 47306 30 100.0 36 .............................. AGCACTGTAAAGCATGTGCTGGAAGTACCCTCAGCT 47240 30 100.0 37 .............................. AATCCCACCGCTAGCTCCATCTTAAACCCTAGATTTA 47173 30 100.0 38 .............................. CTGATTTCTCTAGCGTTGTCACGGTCTTCACCTCCTTT 47105 30 100.0 36 .............................. GCTGAATTGACTGGTAAATAAAAAAGTGCCTGCAAA 47039 30 100.0 36 .............................. GGACCAAGTAAGAGTAATATAAGGAGGTGGCAATTT 46973 30 100.0 37 .............................. TCTTGTTCTGATTTCTGACTTTGAAAGTAATTTATTT 46906 30 100.0 36 .............................. TTCAAATCAAAGCCTGCAGTGGTAATTACCATCAAA 46840 30 100.0 40 .............................. CCTTTTTCACATGTACACCTTACTGCATATTCTGCCTCAT 46770 30 100.0 39 .............................. TTGTTTTTCCGTTAGTTCTTCATCCATTGCAATCTTTAT 46701 30 100.0 36 .............................. CTTGTTGCTATCAATGATGACAACCTTGACTGTGCC 46635 30 100.0 34 .............................. AGAAGTTCTGCTTCCGTCATAAGTGGCACAATAA 46571 30 100.0 38 .............................. ACCTTTTTTGGACAATAGGTTAACAGTTCCTTAGCTGC 46503 30 100.0 36 .............................. TTTTAGGTCATATGCAATGGCAGAACCGTATATAGC 46437 30 100.0 37 .............................. GTGCTACAAGTGTACCTTTTCTATATTCCATCTCTCC 46370 30 100.0 35 .............................. CTAGTTATTTTATTCCTTTCGATTCTATTTTGGCT 46305 30 100.0 36 .............................. ATTATTTCTATAGTATTAAAACAGAATAGGAAAGAA 46239 30 100.0 37 .............................. CCTGCCGTGATTTCCAGCTCCGCTTCGGTCTTGCTAG 46172 30 100.0 38 .............................. AGGTTAGCGGGGCGATAGCATGAAAAACTTCTTTAGCC 46104 30 100.0 41 .............................. TGCAAAATGAATCTTTAGATTCATGAAAGGCTAGAATGCAG 46033 30 100.0 40 .............................. ATTACGCCGGTCGTGTCCGATGTGCTTTCTAATACTCCGC 45963 30 100.0 36 .............................. TCCGACGCTGACAGTTACTTTCTTTAGCAGACCGAT 45897 30 100.0 37 .............................. GGGGGAACCAGTAATAATTACGAATCCCCCAGCCTAG 45830 30 100.0 36 .............................. TGATAACGTTTGTATTTGCCCTACAATGAGAGAAAA 45764 30 100.0 37 .............................. TCAAAGAGATAAATCCACCTCCTCATCTCCCTTTCAG 45697 30 100.0 35 .............................. ATATAGACTCTTCTTTCCGTATACCAACAAAACAG 45632 30 100.0 36 .............................. TCGTTGATGTAACCGCTGATATGACACCGGAACAAA 45566 30 100.0 37 .............................. ACCGCTCAAACAGGCACATGGACACATCTTGCTATTC 45499 30 100.0 36 .............................. TTTTCCTCCCCTCTGCCTTTCCGGACTTGGGACCGG 45433 30 100.0 38 .............................. AAAATGAAGGAAAAAGAAAAGTGTTTTTTTGTGTATTA 45365 30 100.0 36 .............................. AATAATTCAAAAACGTAAATAATAAGCCCATGCCCG 45299 30 100.0 37 .............................. CGTAGTACCCCCGTGCACGGGAAGGGGTCTCTGGGTC 45232 30 100.0 37 .............................. GTGCTACAAGTGTACCTTTTCTATATTCCATCTCTCC 45165 30 100.0 35 .............................. CTAGTTATTTTATTCCTTTCGATTCTATTTTGGCT 45100 30 100.0 36 .............................. ATTATTTCTATAGTATTAAAACAGAATAGGAAAGAA 45034 30 100.0 35 .............................. CCCCATGCTTCCGCAGCTGTCAAGCGTTCTGTTTG 44969 30 100.0 35 .............................. AGCTTTTTCATAATGAGATAACTGAAGCAAAACAA 44904 30 100.0 35 .............................. ATACGAGAAATACTACATTAACGTATAATGGCAAT 44839 30 100.0 35 .............................. TAAAATTGCAGAATTGCTTGTATACACCAGATTTG 44774 30 100.0 36 .............................. AAGTATTCAACTTTCATAGCTACACTACAATTTTGT 44708 30 100.0 37 .............................. AGCCACTGGGAACAATTGACAATATCCCAGTGGTTCG 44641 30 100.0 37 .............................. AGGTTCTTCTCCCCAAATCTCCTTTCCAGCACTTGCC 44574 30 100.0 38 .............................. ATCTCTCCCCTCTTTCCAAATTTAGCCATGTTGCCATG 44506 30 100.0 39 .............................. GGTTTTTCCACCTGTTCAGTAGGGTTTTTGTTAATCAAG 44437 30 100.0 38 .............................. GGTTTCTTGTATGTTTCCAGCCATGTATCCAGCCATTC 44369 30 100.0 36 .............................. TTGGCGTTGTAAAAGGTATATGGAAGCACACACCAC 44303 30 100.0 38 .............................. AGGTGTGCAAGATGTGGGGCGTCCTTAGAGGACGCCGA 44235 30 100.0 37 .............................. GGTGGCGCTATAAATATGTCTGGCTGGTATCCGCCCA 44168 30 100.0 39 .............................. AGTCCTTAATATCGCCGTAATAATACACACCAAACAAAC 44099 30 100.0 37 .............................. AAAGTTCTTTCAACAACTCTAGCAAGAGCTGTTAAAG 44032 30 100.0 39 .............................. TACGGTAACGGGGTGATGGCAACAGTGTCTTCGTCAACT 43963 30 100.0 36 .............................. TGTAGTGGCAAATAGGCGAAAATAGAAGAAAAACTA 43897 30 100.0 35 .............................. AACCGCAATCGCACCGAGAAGCCCTTCGCAAAATT 43832 30 100.0 36 .............................. TTTCCTGCAGTCCTGTAGCGAGGAAAACCGTTTGCA 43766 30 100.0 37 .............................. ACCCAAATATGTAAAGTTTTACCAAGTACCATAGCTT 43699 30 100.0 36 .............................. CAACTATGAAGTTTATGAAGTGTTTAACCTTTTCAA 43633 30 100.0 35 .............................. AATCTACTTGGTCTGGTCCTTCTATTCGTGTCCTT 43568 30 100.0 37 .............................. GTGTAAAAATTTGCAATTTTTCTCTTGATAGCATTAA 43501 30 100.0 38 .............................. CGCTTGCACCACGGACATGAATAGTTGCAGGCACCAAG 43433 30 100.0 39 .............................. CAGCATAGCGAAAATAAAACACAATATATTGTGTAGGAG 43364 30 100.0 38 .............................. AAGTGTAAAAGCAAAACAAGATGCAGTATAAAAGCAAA 43296 30 100.0 39 .............................. CATAAATGCCAGTGCAAGCCTTGTAGGTGCTACAAATAC 43227 30 100.0 41 .............................. AGGCTGTTGAAGAGCAATGATGGCCAGTATCTGTGGCAACC 43156 30 100.0 36 .............................. TGGCTTAATAAATTAGTCAAGGTTGGGCTTATAAAA 43090 30 100.0 35 .............................. TCGAAAATGATGAAGGATATCAAGCTTTGGAAGAT 43025 30 100.0 37 .............................. CATGCAGCCTGGCGATAAGGCAGTCGTCTTCAGGTTG 42958 30 100.0 37 .............................. TAGAATAGCATTCCTGCGTCTTGTCTTTTTCCCTGTA 42891 30 100.0 36 .............................. TTCCAACTGCTGTAATTAGCTTGCCGACGACTAATA 42825 30 100.0 37 .............................. ATATAAGGCCCATGAAGAGTAATCTATGCATAGGTGT 42758 30 100.0 39 .............................. ACCGCAAGACGATGCAGGAAATAAAGCGAGAGATAATAC 42689 30 100.0 35 .............................. TCAAGGTGCAGTGGTGTTATTCCTTGCTTATGCTG 42624 30 100.0 37 .............................. TGTTTGGTGTAATGTATTGATAACCGCGTTAGCAATT 42557 30 100.0 35 .............................. AATTAAGCGAAATTCAGAATATGCCTGAGGAAAAG 42492 30 100.0 35 .............................. TGTGAAAAACTGGAAGCAGTGGAAAGAGGAGAGTT 42427 30 100.0 35 .............................. ATGAGAAGGTTTTTATATTTTTCAGCCTCATTTTG 42362 30 100.0 36 .............................. GCCTCATCCCATTTAACCACTAACCTAATTTTTATA 42296 30 100.0 36 .............................. AGATTCAGTTGTCCTCTCACCCGTAAGCCGTGCGTG 42230 30 100.0 37 .............................. GCGTTCCATGTGCTGTAGAGCCAGCGCACAATCTTGG 42163 30 100.0 35 .............................. ATTCTCCCTCATTTGTTGTGTTGTAATATTTCTGT 42098 30 100.0 35 .............................. AGGTTTGAACCGCCGGAGGTGATATAATGGATTTA 42033 30 100.0 38 .............................. CTTACCCGGGGCTTTTTTTGTTGCCAAAAATTTTTCAT 41965 30 100.0 34 .............................. GTATCATTCTAGAAATTTCTAGCGTTATATCCTT 41901 30 100.0 36 .............................. AAGTCTATAGCTTTAGCTACTCCTGCATTCCATATG 41835 30 100.0 36 .............................. ATATTTCTTTAACATTTTTAACGCCGCTTGAGCTTG 41769 30 100.0 37 .............................. CGCCACAGCCAGCCGATGGAACGTGACTGCTAAATGG 41702 30 100.0 35 .............................. AGTAATATCGGCTGGGGTATTGCTGCAACATTAGG 41637 30 100.0 38 .............................. TTTTAAAACAAACTTAACGTCTGATGTTTCTATAGCTG 41569 30 100.0 35 .............................. GGAGGCATGTACTTGCGGAGGTCTTGCTCAAGAGA 41504 30 100.0 37 .............................. TTCCCTGGGGAAATCCTTGTTCATGGGGTTATAGCTC 41437 30 100.0 38 .............................. CTTATCATGCGGGCGCACGACGGCCCCGACTATGGAAA 41369 30 100.0 40 .............................. CTTTATGTCTTCTGGTTTTCTGTAAAAGGGTGTTCCTCCA 41299 30 100.0 40 .............................. TATTAATACAATGCTTATCAACAAGCGTTCTCATACCCTG 41229 30 100.0 35 .............................. ATTTTAGGCTTATATCTAATGTAAGGTCCTTCTCT 41164 30 100.0 36 .............................. CTGTAAATTCTGCGTCAATAGGTTCTTGTTGTTGCT 41098 30 100.0 37 .............................. TACAGATTTTAGGTGTATTAGGTGCTGCATACCCTAG 41031 30 100.0 35 .............................. AATTAAAAGCATTAAGGTTAGAACACAATTTAAAA 40966 30 100.0 40 .............................. GCGTTGTGTTCGGCTTGCAGTAGCGGCAGTCGATACACAG 40896 30 100.0 38 .............................. AATGAGAACGGACAAGAGGAGATTGTAGTCAAAGGCAA 40828 30 100.0 37 .............................. TTATGAAAAAGCTCAAAAAATTTATCTATCATTTTAA 40761 30 100.0 38 .............................. CATGGAGAGGAGAAATATAATAAAGCCGCTGAATGGCT 40693 30 100.0 35 .............................. TATCTTCCCAGAAAAGTGGACATGGTTCTTGTTCT 40628 30 100.0 40 .............................. ATTTTAAAGCCAGTTCTTGCAGTTTCTTCATTTCGTCAGC 40558 30 100.0 35 .............................. GATAAAATGCTCGATGAATTTAGAGAAGCGTTAAA 40493 30 100.0 36 .............................. AACAGCAAGAAGCGCTAAAACAAGAGTTGCAACTAG 40427 30 100.0 35 .............................. AACAGATGGCAAACGGGCTGCACAATGCCAACAGA 40362 30 100.0 38 .............................. CTGCCACCGATGCCTTTGCGTCTCCACTCAAGCCATTC 40294 30 100.0 37 .............................. TGTAATTATGGACGAATTACATGCTGTCAGAGACAGA 40227 30 100.0 36 .............................. AGAGAGCCAAAAATGAACCTAATTTTTTACCTACAG 40161 30 100.0 37 .............................. TGTAATTATGGACGAATTACATGCTGTCAGAGACAGA 40094 30 100.0 35 .............................. TCGAAAATGATGAAGGATATCAAGCTTTGGAAGAT 40029 30 100.0 37 .............................. CATGCAGCCTGGCGATAAGGCAGTCGTCTTCAGGTTG 39962 30 100.0 37 .............................. TAGAATAGCATTCCTGCGTCTTGTCTTTTTCCCTGTA 39895 30 100.0 36 .............................. TTCCAACTGCTGTAATTAGCTTGCCGACGACTAATA 39829 30 100.0 37 .............................. ATATAAGGCCCATGAAGAGTAATCTATGCATAGGTGT 39762 30 100.0 39 .............................. ACCGCAAGACGATGCAGGAAATAAAGCGAGAGATAATAC 39693 30 100.0 35 .............................. TCAAGGTGCAGTGGTGTTATTCCTTGCTTATGCTG 39628 30 100.0 37 .............................. TGTTTGGTGTAATGTATTGATAACCGCGTTAGCAATT 39561 30 100.0 35 .............................. AATTAAGCGAAATTCAGAATATGCCTGAGGAAAAG 39496 30 100.0 35 .............................. TGTGAAAAACTGGAAGCAGTGGAAAGAGGAGAGTT 39431 30 100.0 35 .............................. GGTCTTAATCCAGCAATAGGGACATATTCTATATT 39366 30 100.0 35 .............................. ATGAGAAGGTTTTTATATTTTTCAGCCTCATTTTG 39301 30 100.0 39 .............................. GTTCAAAACCCGTCAGTATGGGCAAGAAGTGATTTGTAT 39232 30 100.0 35 .............................. AATCTACTTGGTCTGGTCCTTCTATTCGTGTCCTT 39167 30 100.0 37 .............................. GTGTAAAAATTTGCAATTTTTCTCTTGATAGCATTAA 39100 30 100.0 38 .............................. CGCTTGCACCACGGACATGAATAGTTGCAGGCACCAAG 39032 30 100.0 39 .............................. CAGCATAGCGAAAATAAAACACAATATATTGTGTAGGAG 38963 30 100.0 38 .............................. AAGTGTAAAAGCAAAACAAGATGCAGTATAAAAGCAAA 38895 30 100.0 39 .............................. CATAAATGCCAGTGCAAGCCTTGTAGGTGCTACAAATAC 38826 30 100.0 41 .............................. AGGCTGTTGAAGAGCAATGATGGCCAGTATCTGTGGCAACC 38755 30 100.0 36 .............................. TGGCTTAATAAATTAGTCAAGGTTGGGCTTATAAAA 38689 30 100.0 36 .............................. TCTGTAAGGGGAGAAATGATTTTGTGCTCATCGGAA 38623 30 100.0 39 .............................. ATGTATATTCTGTCGTATCCGTTCTTTGTCCATCGTTGT 38554 30 100.0 35 .............................. ACAGAAGCAGTGTTGAACCCGTTAAACTGGATACC 38489 30 100.0 39 .............................. AGGAGTATTTTAGAGTACCTATGGAAGAATTATTTCCTG 38420 30 100.0 37 .............................. GTTCGTTTATGTAGTCTTTAATATTTGAGGCAGCAGG 38353 30 100.0 37 .............................. GTTTATGAATATGAGGACAGAGGCTTCAAAACAAAGT 38286 30 100.0 37 .............................. CTACTAAAACTGGTGTTAAAGCAGTCACAAAGGCTGA 38219 30 100.0 36 .............................. AGCAATATACCTGATTCATACAATCCTCTTCTATTA 38153 30 100.0 37 .............................. ATACAAAAGGGACATTAGAATGGGACGAAGCTGGTGA 38086 30 100.0 38 .............................. CTTAGTACCTTCCCAAACTTCTTTAACTGCGTCATAAC 38018 30 100.0 37 .............................. ATACAAAAGGGACATTAGAATGGGACGAAGCTGGTGA 37951 30 100.0 38 .............................. CTTAGTACCTTCCCAAACTTCTTTAACTGCGTCATAAC 37883 30 100.0 36 .............................. ATCTTGCTGCTTCCAGCTGTTTTTTATTCAAGCTCA 37817 30 100.0 36 .............................. CGACCAAAAACCTGTGCGGTTGTTCTGTTAGTATTC 37751 30 100.0 35 .............................. AGTGGAGATGGAAAAGTACTTCTGAATTACAAGAA 37686 30 100.0 37 .............................. CAATAAAAGCCGATTCTAAAGCACCCTTAAGCTGTTC 37619 30 100.0 39 .............................. CAAAGTTCTCACCAGAGGCAGCAGCAGCGTTAAGTAATC 37550 30 100.0 35 .............................. TACATTTCTTTTAGACTCATCGAAAGCGGGCCTCA 37485 30 100.0 37 .............................. CAACATCTTGCCAAGTTTTTTCAACTTCCCCAAATGT 37418 30 100.0 36 .............................. CAGTAGACACGACAAAAACAGTGTAAAAATAATTTC 37352 30 100.0 35 .............................. ATTAAGGTAAATTTAGAAATGGACGGACAATTGCG 37287 30 100.0 37 .............................. TTTAGCTAGACTGACCCGACCAGTTTCATCCAGAAAC 37220 30 100.0 39 .............................. CGCCGGAACCAGATACTCGTCTATCTGGGGGGACAGCTC 37151 30 100.0 37 .............................. CGTGGCTAGGGGAATCTATCCTAGTCGTGTGGTTTCA 37084 30 100.0 36 .............................. AGGTGGGGGATGTCCTCGACCTTGGTGGGGGGTGGA 37018 30 100.0 38 .............................. GTAGCAGTAGGAGAGCGTAAGTACGAGGTAGTATTGGC 36950 30 100.0 36 .............................. TTTAGGTGCAGATTTGGTAGGATGTTATGTCAAAAA 36884 30 100.0 36 .............................. CCTTTTTCTGTAATCCGAAATATTTTGCTATCCCTT 36818 30 100.0 36 .............................. GCCCGAATGGAGCCGCAATCGCCTGCCCAAAAGCCA 36752 30 100.0 37 .............................. AGGCAATGGTATGTCTTCGTCTATTACTTCAAAGTCT 36685 30 100.0 37 .............................. GATAGTGGAGTGGCATTGATATTGGCCGGGATGTTAG 36618 30 100.0 39 .............................. CACCTTGTAAAAACTACCTCAGTGCAATCCTGACAATAG 36549 30 100.0 36 .............................. AGTTATAAACACTTACAAGTTTTTGATGATAGTTTG 36483 30 100.0 37 .............................. CCGAGGATTAATAAACCAGTCCCTCGCGTTAAAAAAA 36416 30 100.0 37 .............................. AATTCTCTAAGGCTCTCGCTGCATCGGGAGTTAAAGA 36349 30 100.0 38 .............................. AACGGTATGTCTTTTAATAATTCCGCCCAAATATCTAC 36281 30 100.0 36 .............................. AGTTATAAACACTTACAAGTTTTTGATGATAGTTTG 36215 30 100.0 39 .............................. AACCTTCCCTCAAAGCGTGATAACTCTTACCACTACCCA 36146 30 100.0 38 .............................. GTAGCAGTAGGAGAGCGTAAGTACGAGGTAGTATTGGC 36078 30 100.0 36 .............................. CCTTTTTCTGTAATCCGAAATATTTTGCTATCCCTT 36012 30 100.0 36 .............................. TTATCACGGTAGGCTGGGGCTTTGTCTCCCTGGCCT 35946 30 100.0 39 .............................. CTAACGTTGAATTATTACTAACCACAAAATCATACTCTG 35877 30 100.0 36 .............................. CTGAGCGGCTCGGGCAATTATTCTCGCAGAGATTCC 35811 30 100.0 38 .............................. TCCTGACAAAAACTTGTCTGTCGCAGTTACATAATACT 35743 30 100.0 38 .............................. GAGTATTCGGAACGTTTCTGACTTGGCTACAAGAGAAA 35675 30 100.0 35 .............................. CGCCCTGCAAGCCCTGCAATAGCTGCTATGCCTGC 35610 30 93.3 0 .................A...........T | ========== ====== ====== ====== ============================== ========================================= ================== 228 30 100.0 37 GTTTTTAGCCTACCTAAGAGGGATTGAAAC # Left flank : GGATATATTAAACCCTTCAAGTTTTTTTGATAAACTATGAAGAATTCTGAGACGAACGGTAATTTCAAATTTGTGATTTTCTCTTGGAGTTGTTTTTACAAAAGTTTAGGAGTTTCATCAGGAGTATTTTCCAAAAATGAATTCTAAAAGTTTTTAGAAATTCACTATTATCAATAAATTCTGGTACTTTCCCATAGTCATTTTTAAACAATTCTATTTTTTCATAGGGGTAACTTTGATTTGAGTGATTTTTCTATTTTACTGTGTTTTTTGTAAATAATTTGTTGATACCAATTTTATTAAACGTATTTGAATAACAAAATATTTGTCGTCGATCCCTAATAATGCAAAAATCACTGGAGATCGACGACATTTTTATTTTTTGTTTTCATCAAGGTAATTGATTTTATTGAATAATGTGATATAATAAAGGCAAGATACTTGACAAAGTCATTATTAGAGACAAAATTTTCATCCGCTTTTTATGAGGCCTTGAACGT # Right flank : AGGTTGTGCTAGTGAGTTTCCTGAGCTGTAGTGAAGGTTTTTGTGTTTGCTATATTGACATAAATCCATAAAGTGGTTATAAACTGTTTTAATTTTTCTTTCATATTTAAGAAGCTCCCGAAACTTCTTATTTACTTTTTGGTAAAAAGTTGCTTTTTAGAAAGGAGGGATGACCGTGAAGAATTTCTTATCAATAAAAGAAGGAATGGAGATTTTTAGTACGAAACTAAAAGTGTGTGGAAGGTCTATAGAGTTGAGAAAATTAAATAATGTGATTTTTAAGGTATTAGTCTTATTACTTGTTTTTACTTTACTTATGTCTTTGCCCCCAAAACGTAATGCAAAAGTACTAGGGATTGAAATAGTAGAACTCCCGAATGATCCAAAATTTGAAAATAATAATATAATAAAAATGCCAAAGTAGCATTAAAATATATTGAAGGCGTTATGGTAATGCCTGGGCAGATTTTCTCTTTTAACAAAACAGTAGGAAAACGAAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGCCTACCTAAGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //