Array 1 403594-394561 **** Predicted by CRISPRDetect 2.4 *** >NZ_QDDL01000003.1 Pelagibaculum spongiae strain Hp12 NODE_3_length_442556_cov_33.3559, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 403593 29 96.6 31 ............................C AAACAGAGGCATCGCTCCGATCTGAATCATC 403533 29 96.6 31 ............................T TGAGTTAAAAGAAACCAGCCGATTGTAAATT 403473 29 100.0 31 ............................. GCCAGTTGGCGCTCTTCAAACAGCACGCCTG 403413 29 100.0 31 ............................. TCGGCAGTTGACACTGTAGACGCGGTGATTA 403353 29 100.0 31 ............................. TTGAAAAAGATGTAACTGCCATGCAAAGCAA 403293 29 96.6 31 ............................C AGTCGTGCGGCTGCTATAGCAGAATCGTACA 403233 29 96.6 31 ............................T GCCGGTGATCCCCTTGCTATAGCGCAAGTTT 403173 29 96.6 31 ............................G GAAAGCACTTACAAGAAAGGTCTAGTATCTC 403113 29 100.0 31 ............................. TCAAACCCTTTAATCCAAAAATAACATTTAG 403053 29 96.6 31 ............................G GTAACATTTAGAAAAACAAGCCAGGGAACGG 402993 29 96.6 31 ............................T TCCCAAATGCCAGCGGCTACATGTTGGGGCG 402933 29 100.0 31 ............................. AGCATGACCGAAACCGGACTACCGTCGCCTT 402873 29 96.6 31 ............................T GTATGGTGGTTTTGGCTAATGTTGACGGTAT 402813 29 96.6 31 ............................T AAACGCTCAAGCGTTGCTGACAACGAGTGAA 402753 29 100.0 31 ............................. GTTGCTGCACATCTGCAAGCTTTAAATTATT 402693 29 96.6 31 ............................G ATTAATGACAAGGTTGATTTGTTGTTGCTGC 402633 29 96.6 31 ............................T GTATTCGTGCGGTGTAATGCCTAACTGCTGG 402573 29 100.0 31 ............................. TTTACATCAAGGATTGCGGGTCGTTCGTTCG 402513 29 96.6 31 ............................T CAAAACATCGCGGCGTTTAATCCTGATTGGA 402453 29 96.6 31 ............................T ATCAGGTCGTGGGTAGCGAACCGGGATTGAT 402393 29 100.0 31 ............................. CAAACGGCAATTGAAGATAGATCCTACTCAC 402333 29 100.0 31 ............................. GTTGCCTTGCAGACGCTTTCTAAGATCATTT 402273 29 100.0 31 ............................. TGATCTCGGTCTTGCATCAGACTTTGCTTTT 402213 29 96.6 31 ............................C GTACCGCGGCGACACGGCAGGCACCGTCGCA 402153 29 100.0 31 ............................. GACGGAACAGAGACTTCATTTGCTTGAATGA 402093 29 96.6 31 ............................T CATGACTGTAGTGTCGAAAAACCAGTAATTC 402033 29 96.6 31 ............................T AATCTTGATTTTCAGTTTGTACGAATACCAG 401973 29 100.0 31 ............................. TGGTCAAGACGCCCAAGTCTTCCGTCTTCAG 401913 29 96.6 31 ............................G CTAACGGATCGAGGACGGTTATCGGCTCGAT 401853 29 96.6 31 ............................T CGTCGATTATCAATCGGGCACAACAGTATAC 401793 29 100.0 31 ............................. ACCTACCGAAATATCACCATCCCAAATTTTC 401733 29 96.6 31 ............................T GGTTCCTTGCCTTGCGATGATGGCGACGAAA 401673 29 100.0 31 ............................. ACTTGACAACAGGGAAAGGAACAGTGCAAGC 401613 29 100.0 31 ............................. TAGGGCACTTACCCTCAAGCCCATGCGTTAG 401553 29 100.0 31 ............................. TCCCCAAACGTGACCCGGGTTGTGTATGGTC 401493 29 96.6 31 ............................G CTTTACCTTCAGATAACAGCAAGAAAATTGT 401433 29 96.6 31 ............................T CAGATAAAAATCGGCCTATCGCTTCAGATAC 401373 29 100.0 31 ............................. AAATCACCGTAGCCAGCACGCTGAATAATCT 401313 29 96.6 31 ............................T TTAGATTATGGTTGGTGATCCATCCGCCAAC 401253 29 96.6 31 ............................G AAAAGTGCACCCAAAAGGTAACCGAGATTTT 401193 29 100.0 31 ............................. TCAGCTGGATTCGTTCGCCAGAAAATGCGGT 401133 29 100.0 31 ............................. AAAAGAGTAAAGAACTTGTTAGTGGCACTTG 401073 29 96.6 31 ............................C CAAATACGTGTGGTGGCTCGATATCAAAATG 401013 29 96.6 31 ............................G CATCAATCGTTCTCAGTAATAATGATGTTGT 400953 29 96.6 31 ............................C AAAAAAGACCCTAAAATCTCATTAACGCAAG 400893 29 96.6 31 ............................G CCTCCATCACCGCCGCCGTCACCACCACCAT 400833 29 96.6 31 ............................G GTCGCATTGTTTCATGGATGCGGCGCACTTA 400773 29 100.0 31 ............................. AATGATCCGGATTCCTTGCCTTGCGATGACG 400713 29 96.6 31 ............................G AACAAAAAAGGGGCTACCAGCAATTTAAGAT 400653 29 96.6 31 ............................G GAAAGTAATCTACATGCCACCGCCCGAGAAT 400593 29 100.0 31 ............................. GAGATTAAAAGGTTTTTCTCTTCCATCTGGC 400533 29 100.0 31 ............................. TTCTTCCAACCAGTAAAAACGGTTGATTTGC 400473 29 100.0 31 ............................. TTGCGGTGAATGGCTGCTTCGTTCGCTTTCA 400413 29 96.6 31 ............................T GATGCAGATGCAGATGACGACGATCTAAACG 400353 29 100.0 31 ............................. GCAATTTAAGATCGAAAGCGCCAACAGGTAG 400293 29 100.0 31 ............................. TTAACCATACTATCATCCGCTACTATACCGA 400233 29 96.6 31 ............................T ACTTGTTTCTTACTTACACCCTACTTGTTCC 400173 29 96.6 31 ............................T GGCAAAAAAAATGGGGAAGAAATTATGAGCA 400113 29 96.6 31 ............................T TATGGAACGCACGGCAAAGGCATTGAGCTGC 400053 29 100.0 31 ............................. CACGCTGCCTACTTGGTCTAGCGCGGGTTGC 399993 29 100.0 31 ............................. CCAGGGTCGCTGACGATATCGGTCAAACGCC 399933 29 96.6 31 ............................C AAAGCACCGCCGACAAAGCCGCGCTGGAAGA 399873 29 100.0 31 ............................. TACTCAAGATCTAGGTGATGATCTACAAACA 399813 29 96.6 31 ............................C AATGACGAACGGTATGCCGGAGGATCGAGCA 399753 29 96.6 31 ............................T TCTTCTGTTGGATGATCCTCTTCATACGCTC 399693 29 96.6 31 ............................C ATCGGCGCAGGCGTGGCAGAACTTACTTGGC 399633 29 100.0 31 ............................. ACAACCAATCAGGGCAAAGCCGCTTTACTGA 399573 29 100.0 31 ............................. CCATTGATCATGTTTATTTGTTCTTTAATTG 399513 29 100.0 31 ............................. TCCCTTCCGGGATGTCATCGCAGCCGAGATA 399453 29 100.0 31 ............................. CCGTAATTATTAGCGCTTTTCTTTGCAATTT 399393 29 100.0 31 ............................. CAATGCTTGGTAGCAGCAATACGCAGAACAA 399333 29 96.6 31 ............................C ATTCTGCGGGAGATAAAATTGAGGATCTTTC 399273 29 96.6 31 ............................G GAGTGGCTGGAGATTCACAGCAAGAATCTGA 399213 29 100.0 31 ............................. TTACGTTGAGTCTGCGCCAATGGTCGCTGAG 399153 29 96.6 32 ............................C GTGGCCAGCCCTGAAGCTTACGTGCTTGAAAA 399092 29 96.6 31 ............................T TCTGAAACTCAGCACACGACTGGCGTACACC 399032 29 100.0 31 ............................. CTACAAAGGAAAACTAAAGCCAACCGGCAAA 398972 29 100.0 31 ............................. AATTAATTACGATGAAAACCCATTTCTGTCC 398912 29 100.0 31 ............................. TTTGATCAACAAATCTAAAAACCCTGTCACC 398852 29 96.6 31 ............................G CGTCAGATCGTTATGACGGTACTTACTGGCC 398792 29 100.0 31 ............................. GAGTTACTTAATGCCGCCTACCAGCTATTTG 398732 29 100.0 31 ............................. AAATAAGCCAGCCCGGTTTTGGGGTTGGCGG 398672 29 100.0 31 ............................. TACGCCTGTGGGGTTGGTATTGGCGTAGAAG 398612 29 96.6 31 ............................T AAAAAAGTAAATAGTAAACTGCTTTGCAATA 398552 29 100.0 32 ............................. AATACTGCAGTAGCTCGACTAAAGATTTTTTC 398491 29 100.0 31 ............................. AACAGCCTCAATAGTTACAGAAGATGGAAAA 398431 29 100.0 31 ............................. TCACGAGTGGAAGTATCAATGTTGATTATTT 398371 29 96.6 31 ............................T TTGATATCGACCACCCGCATAGCCAAAATGC 398311 29 96.6 31 ............................G TCGATGTAATTGATTTGAAATAGACCGATTA 398251 29 100.0 31 ............................. GATCTCACCATCAATCGAAACTGATAAATTA 398191 29 96.6 31 ............................C GTTTAAGTTCGAAACGACACACATCGGCGGA 398131 29 100.0 31 ............................. CAACCGGATCAAAAAGCTCCCGCTGCAAATG 398071 29 96.6 31 ............................T TGACGAAGTGGTGCGGTATGCTTTGGGCGGA 398011 29 96.6 31 ............................T TTCCCGCTCCTCGCTGCATTCCCGAGAGCTG 397951 29 100.0 31 ............................. ACCAGGTAAGTACGCAAATCGTCATCGCCAA 397891 29 100.0 31 ............................. CCGCGCAGCGAACTATCCGCATCGTAGTGGC 397831 29 96.6 31 ............................G GCGTTGATTCCACAAACGATATCGACTGGTC 397771 29 100.0 31 ............................. GCAGAACAACCAAGTCACCTGCAGTGCGCAA 397711 29 96.6 31 ............................G CCGTAGGTTTTGCGCGCCAGCGCTTCAACAT 397651 29 100.0 31 ............................. GCTTTCGTAACGCTCCGGGTCAGATTTCATT 397591 29 100.0 31 ............................. CTAAGGGCGCGGTCGGCTGGACTCGCATGGA 397531 29 100.0 31 ............................. ACAGCTGAAAAACTGGATTCCTGAACTGTTC 397471 29 100.0 31 ............................. GAAACCAAGCCGCCGATTATTGGTCGCGTAT 397411 29 100.0 31 ............................. TCCTGGCGGCCATCGTTGCGCCGCTGAACCA 397351 29 96.6 31 ............................G CCATATGCTGAAGCTTGAAGCGCTAGTGTAT 397291 29 100.0 31 ............................. ACGTCTGACTTTGGTTTTGAAAGGCGTTAAT 397231 29 96.6 31 ............................T AGGTAACTCTCTTGAACAGATAGGCGAAGGG 397171 29 100.0 31 ............................. TGTAGCCAAAGTCATTTTCATCAATTTCAAT 397111 29 96.6 31 ............................T GCAGGGAAGATGAGGCTGAGTTGAAAGGCGA 397051 29 100.0 31 ............................. ACCAACCGCCCAAAGATGGCACAAAAGCCAC 396991 29 100.0 31 ............................. AAAAAATGCAGCAGCATTATGTGCGCACGGC 396931 29 96.6 31 ............................T GCAGGGAAGATGAGGCTGAGTTGAAAGGCGA 396871 29 96.6 31 ............................G TTATCGGTGCCGGGAATATCAGAAAAAGAAA 396811 29 100.0 31 ............................. GCACCGAAGTTGCGTGATTAACTCGCAATTC 396751 29 100.0 31 ............................. GACCCTTGGTTTCCAGAGAACAGCACTGTAC 396691 29 100.0 31 ............................. TCAAGCGGTTTTAATGGCCTTAAATTAGATA 396631 29 96.6 31 ............................T GGCGAAAATAGCAACATTGACGGGAATTATT 396571 29 96.6 31 ............................G CTGAATGAAACCGGATTGATGCTCGCTACCG 396511 29 100.0 31 ............................. AGGAGTACGCGCAGGACGCCACGATCACAAG 396451 29 100.0 32 ............................. AAATCGCTTCAATCCTCGCTCTGTTCAACAAA 396390 29 96.6 31 ............................T ACACGATCTGGAAAAGGCGTTGGTATTGTTA 396330 29 96.6 31 T............................ AGCGCGGGAGGTGTATCAATAATGCAAATAT 396270 29 100.0 31 ............................. CTCTGCAAATTTGAATAGTTTCTTGATCAGT 396210 29 96.6 31 ............................G CTTGTTCGCCAAAATTGGTTTTGTACCATTC 396150 29 96.6 31 ............................C GAATAAATCAACAGGAACGCCGTAACGCGCA 396090 29 100.0 31 ............................. TCACCGCTGCTTTTGATTCCGGTGGAACTTC 396030 29 100.0 31 ............................. CCATGGGACAAGATCGGGCTATTATATATAG 395970 29 100.0 31 ............................. TGTCTGAATCTTTGTACTCTGAGCAGTGCAT 395910 29 100.0 31 ............................. TCAGACTCTAGAGAATCCGCCTTTGTAAAAT 395850 29 96.6 31 ............................C CAAAAAAAACCCCGGATAATTTCCGGGGTAA 395790 29 100.0 31 ............................. CCACCCGCAACGATTTCATGTTCGGTTGAAT 395730 29 100.0 31 ............................. TTTACGATGGTCGCCAGATTGCGAACTTCCG 395670 29 100.0 31 ............................. AAATGAGCGTAACCATTCTGTTCTTGTTTAA 395610 29 96.6 31 ............................T ACACGATCTGGAAAAGGCGTTGGTATTGTTA 395550 29 96.6 31 ............................T GTTGGTTTTTACACTGTTGCCCCGAGTTCTT 395490 29 96.6 31 ............................C ATTTGTTACAACTACACGACCGTCAAACAAG 395430 29 100.0 31 ............................. AGTTGATCCAAAGACCGGCGAAAGCAAGCAT 395370 29 100.0 31 ............................. AAATGAGCGTAACCATTCTGTTCTTGTTTAA 395310 29 100.0 31 ............................. TCACCGAAACGTCAGCAGTAGCTACCACTTG 395250 29 100.0 31 ............................. TTGTCTTCTGAGCAGATCTGAATACCTATTG 395190 29 96.6 31 ............................T ACAGTAATCGGTCTATTTCAAATCAATTACA 395130 29 96.6 31 ............................G CTAACTGAGCCATCACCATCTGATTTGCGCT 395070 29 100.0 31 ............................. ATAGCGTATCAATTGAACCATTATTAGCCGA 395010 29 96.6 31 ............................G TTGAATGAAACCGGATTGATGCTTGCTACCG 394950 29 100.0 31 ............................. GGCTCAGGCTAACCCTACCCCAGCTAGCAAA 394890 29 100.0 31 ............................. ATTGCTGCCGCGTTTCACCGCGCATTTCTGC 394830 29 96.6 31 ............................C GAAACCATCACATCAATTAAAACGCGAATTT 394770 29 100.0 31 ............................. GCCGCAGCAATGGGTTTGCCGCATGCGAAGC 394710 29 96.6 32 ............................C CAAAAAAACCGTAGAGCAAATATCTTGAAAAA 394649 29 96.6 31 ............................G GTAGACTTGCTCAACACCGCCGCGGTCTTCA 394589 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= ================================ ================== 151 29 98.4 31 GTTCACCGCCGCAAAGGCGGTTTAGAAAA # Left flank : CGCTTGATTTGTCGCAGTGGCTAGATCGCTTAATGGATTATGTGCATATTTCATCGGTGCGCGATGTGCCAGAAAAAGTAGAAAAGTATGTTTGCTACTCCCGTCAACGTAGTAAAACGGGTGTTGAACGATTAGCCCGGCGCTATGCCAAGCGGCACAACATCGAGCTTGAACAAGCCATGGCACATTATCAGGACTTTCAACCGAAATATCTGAAAGCGCCATTTATTCAAATGCAAAGTCTTAGTGGTGATCAGCAGTTTCGCTTGTTTATTGAGCGAACCTGGTGCGCAGAAGCATCTGCTGAAGCGACAGCAGATTTTGGTAGCTATGGATTAGGCAAGAACACCGCCTTACCCCATTTTTAACCAATAAAATTGGCTCTTTAACAAATTGAAGTAAAATCAACGCGTTGTGTGTGGTGTCGAAAACATAGGTCAAAGAAGGATTTCTTTGAGCCAGGCGCCGCTGCAACGCGCTTTTTAGTTTGTTAAACTCCT # Right flank : AAAAAATTATTTTGATGGCTATAACTTGATCCTACTTTTTTTTGTTGGCTATGCAGTGAGTTTTTGTAATTTAAAATATCGGGTGGTGCTGCGCTAATCCAATTTATAGTCTTGGAATTAAATAATACACCGATTGCTAATGATTCAATTTTACCTGCGAACATGTGAGGAAATTTTAGAGTTTTGCTCTCTTTGCTTATGGATACCCGCCTTCCATAGCGAGCATGGCGGAGTGATTAATGAAACGCTGTAGTTTTGAACATACTCTGAGTCGTCATTCCAGACAGGAAGTGCATGGATACACGGATTAGGGCGACGCAGGGTGCCAAACCCGATAAGTCGGAATCTATGTGCTAAGGATGGTAGCTCTGCTCCAGAAAAATCATTTCAAAAATTGAAATCGTTTGGGGTAATTTAAAATTTCTTCGGCCTTTATGTTTTAAATATCTGGCCTGGCAAGGCGTAAACGAGTAAGCATTTTAAGTAACCTGCCACTAAAT # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.74, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCGCAAAGGCGGTTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCGCATAGGCGGCTTAGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //