Array 1 18102-16747 **** Predicted by CRISPRDetect 2.4 *** >NZ_CMYQ01000037.1 Neisseria meningitidis strain NM1837, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 18101 36 100.0 30 .................................... TTTCTTTTTGTAATTGTTCTGCCTTTTTTA 18035 36 100.0 30 .................................... AATAACAACCATTTTGTTATTTCGATTTTT 17969 36 100.0 30 .................................... CCAAATAGAAATACATACGCCGAGTAATTA 17903 36 100.0 30 .................................... TCCTGCCAATTATCATACATAAGATTTTGC 17837 36 100.0 30 .................................... ATGATGCAGGCTGCTCCGTCATCGTCTGCA 17771 36 100.0 30 .................................... AAAACCAACCGGGTATTCATACACAGCCAA 17705 36 100.0 30 .................................... AATAACAACCATTTTGTTATTTCGATTTTT 17639 36 100.0 30 .................................... CTTTAACTTTGACCGTGTGCAATCCAGTTA 17573 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 17507 36 100.0 30 .................................... CTTCTGCCTTTTTACAAGCTCGCTTTCTTT 17441 36 100.0 29 .................................... TCGGCCGCTTTATTTCTGCCATATCGACG 17376 36 100.0 30 .................................... TCCTGCCAATTATCATACATAAGATTTTGC 17310 36 100.0 30 .................................... TACCCACGGCGGAAACCATTGCCACAAAAC 17244 36 100.0 30 .................................... AGTATTCGTCGATGATGGAAACTCGAGCAT 17178 36 100.0 30 .................................... TTAAAATAATAACCCAATACACGATGTTAA 17112 36 100.0 30 .................................... TTTAAAACCGCAAACCAGTTTGTATCCTAT 17046 36 100.0 30 .................................... CCTATGCCTGTTATTGTTTTCAGCCTTTTG 16980 36 100.0 30 .................................... CCGTTGATGACGGATGTGTCGGGTTGCGGA 16914 36 100.0 30 .................................... TTATGCCGTTTTCATCCGGCTTGAACATTT 16848 36 100.0 30 .................................... TTAAAATAATAACCCAATACACGATGTTAA 16782 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 21 36 100.0 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : TCCCTTTCTCATTTCGCAGTGCTACAATAACGGCAACCCACTAAATTTTGCAAATGC # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA //