Array 1 168061-172593 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHPMQ010000018.1 Burkholderia gladioli strain AU38680 NODE_18_length_181475_cov_18.848479, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 168061 28 100.0 32 ............................ GACACGCCCAGGCAAGCGGCTGCATGCGCCTG 168121 28 100.0 32 ............................ TGCCCGATGACGATCGGCTACTCGCGCATCTG 168181 28 100.0 32 ............................ CTCACAATCCTGAGCTCGAACACGGGCCCGAT 168241 28 100.0 32 ............................ AACGTGTGCGAATCGCTCGCTGATGTCGTCGC 168301 28 100.0 32 ............................ ATCGGTGACAACAACCTTGGTCATGCCGTGGC 168361 28 100.0 32 ............................ TTCTTCACCGCTCCGAGCAACTGGCCGTGGTG 168421 28 100.0 32 ............................ TCACGCTGCACGCCAACGTCTCCGAGCGCTAC 168481 28 100.0 32 ............................ TCAACCGGGAGGTGATATGGGGGCTGCTCGGC 168541 28 100.0 32 ............................ TCGTCGGTCGCGCCACGGAGGTTCAGTACCTT 168601 28 100.0 33 ............................ AGCGCCGGCGCGGTGATCGACCAGCGTGACAAC 168662 28 100.0 32 ............................ TGCTCGTCGATGCATTTCCCTCGACGACAGTC 168722 28 100.0 32 ............................ ATTGGGCAAACATCTTCTGCCGATCGTCATGC 168782 28 100.0 32 ............................ TCAGTGCGCGCGAATCCCCCTCCCAGGATTTG 168842 28 100.0 32 ............................ CTCCAGCAATGGGGCGACCGTTCGAGTCTACG 168902 28 100.0 32 ............................ AGTTCGGTGCGGCCGAGGCGAAACCCCGAAAG 168962 28 100.0 32 ............................ AGTCCACGCTTTCCGGGACGTTTTGGTACACC 169022 28 100.0 32 ............................ GCGAGAAATCATCCGCGATGAGCAAGGCTGGC 169082 28 100.0 32 ............................ TAAAGGCTCTGACACGCTCGACGTAGGAAATG 169142 28 100.0 32 ............................ TGATCGGTCATGCCGTCGAGGCCGGGCGAGAG 169202 28 100.0 32 ............................ CGGACATGCTTACCCCCGGCGCGCCACGGTGA 169262 28 100.0 32 ............................ ACACCCTCAATGGCATCCGCTGGAAGGCTAGG 169322 28 100.0 33 ............................ GCTGGAAGGCTAGGTGTCTGGCGCTCGCTTGGC 169383 28 100.0 33 ............................ AGGTCGAGTAGTTCTACCGACTTGCGCGACACC 169444 28 100.0 33 ............................ TATCTCAATCAGGACGGCTCGTCTGTCCGTGGC 169505 28 100.0 32 ............................ TCGACTACGAAGAATCGACGCTCGACGATATC 169565 28 100.0 32 ............................ TCTATCGCCTCGCCGAAGTCACCGGCATTCCC 169625 28 100.0 32 ............................ GACATGCAGGACGTGGCGCTCGGCGTCATGAC 169685 28 100.0 32 ............................ ATGAGCCGAACGTTTTGGACGGACCAGGCCAA 169745 28 100.0 32 ............................ ACGGCGACGATTCGACGCCAGCGGCCCATGTT 169805 28 100.0 32 ............................ AGCAACTGCAGGAAGTTCAGGCCATTGCGCTC 169865 28 100.0 32 ............................ ATCGGGAAGAACTCCCACACCGGCGGTCCGCC 169925 28 100.0 32 ............................ GCGAGGACGGCACGCGCACGCTCACCGTCTCG 169985 28 100.0 32 ............................ AGTACGAGCTTGTGCTGCCGCTCGGCGAATAC 170045 28 100.0 32 ............................ TGACTGCGGTCGAGGCAAAACGCGGCAAGGAA 170105 28 100.0 32 ............................ CACAGGTCGGGCAGCAGCTTCAGCTCGGTGAC 170165 28 100.0 32 ............................ AAGAAAAGCTTCCCGCCCCGCGCCTGCAAATC 170225 28 100.0 32 ............................ GGCACCATCTGCGGCTCGGATCGCTTCGGGAA 170285 28 100.0 32 ............................ TCGCGCTGGACCGCATCGAGCATGTGCAGGTA 170345 28 100.0 32 ............................ GTGTTGCTCGCCGCGGTGGGGCTGCAGCCGGC 170405 28 100.0 32 ............................ GCCGCCGGTTAGGGACAAGCCGATCGAGATCG 170465 28 100.0 32 ............................ ATTGCGGCAGTTCGCACTCGGGATCGCACATG 170525 28 100.0 32 ............................ TCCCTTCCCACCCTGCGCGCCCTGAGCGGCTT 170585 28 100.0 32 ............................ TGCGGTACTGGTGTGTGGGATGTGCCAGAACA 170645 28 100.0 32 ............................ AGTTGGCCGACCAGCTTCAATTGATTGCCGTT 170705 28 100.0 32 ............................ TGAAGATCCGCGGACCCGGCGGCAAAGCCGTC 170765 28 100.0 32 ............................ GCCTCGATTCCTGCGGGACAGCAGATCGTTGT 170825 28 100.0 32 ............................ AGATGGCTGCCGAGGAAGTCTTCGGCCACGAG 170885 28 100.0 32 ............................ ATCCAGGCCGCCACCGAAGAACGCCGCGCATC 170945 28 100.0 32 ............................ CGGGCCGCCAATCGGGAGCGCGGGCATGAAAC 171005 28 100.0 32 ............................ AATGAAATCGCGCGCGAAATGGCCGAGGCTGC 171065 28 100.0 32 ............................ GAGACGTAGAGCCTCAGGGCGACCCTTGGTAC 171125 28 100.0 32 ............................ ATAGTGTAGGCGATGCGAGCGCTGCAGCATAG 171185 28 100.0 32 ............................ ATCGCCGAATCGCTGGAGCGGATGATCGTGGA 171245 28 100.0 32 ............................ GTGGACACCGGCACGTCGCGCGACTTGATGTA 171305 28 100.0 32 ............................ TTGGCGGATTGCCAGTTGACCTCGTCGGCATC 171365 28 100.0 32 ............................ TGCAATTCCACATCGGCGCGACGGGAATGGAG 171425 28 100.0 32 ............................ TACTGGATTTGACCATGAGCGACTGGCTTGAC 171485 28 100.0 32 ............................ TTCATGTCGGGCGTGTTCGGCGCGTAGATTTC 171545 28 100.0 32 ............................ TTAGTAAATTGCGGGGAGTGCAGCTCGTCGGT 171605 28 100.0 32 ............................ ATCAGTACCTTGAGCCCGTCCTTGCCGATCTG 171665 28 100.0 32 ............................ TCAGTTGCCGGGTCACGCGCTGACCGAGATCG 171725 28 100.0 32 ............................ CGTCAGCCCGGGCATTCCGGCTCCATGAAACT 171785 28 100.0 32 ............................ AGTGGTGCGCCTTGGCTACACGATCGACGATG 171845 28 100.0 32 ............................ TGCTCATCGGCCGTTTGCGGATACATCTCACC 171905 28 100.0 32 ............................ TGGATGGCGGGACGGACGACGGCGAGCGCAAG 171965 28 100.0 32 ............................ TTGACGGTCGGCGTGCTGCTTCGGATTTCCAG 172025 28 100.0 32 ............................ ACGGCGTAGGCGCCCTGGTCGTCGCCACCGAT 172085 28 100.0 32 ............................ GCTCGCGATGGAGGTGGATCTTGAACGACCTC 172145 28 100.0 32 ............................ TGTCCAGCCAGTTGAAGCAGTTGCAGCTCAAG 172205 28 100.0 32 ............................ GGATGAACTTTACGCTGCGCTCGGCAGGGCTG 172265 28 100.0 32 ............................ TGAACGACGACGGGATCAGCCGGCGGCTGCTT 172325 28 96.4 32 ............A............... CTCGAAAAGACCGGCCTCATCATCGGGTCACC 172385 28 100.0 32 ............................ TTGATCGACTGGAACCAGCGGCCTTCGAACGC 172445 28 89.3 32 ...........G..........T....G GTCTATGACATCGTGCGCTTCGCGCGCAGCCA 172505 28 89.3 32 ..C........T..........T..... TGCCGATGCGGGAGAGGCGGTGGCGGCCGATC 172565 28 71.4 0 .......T.T.AA....TGC..T..... | G [172589] ========== ====== ====== ====== ============================ ================================= ================== 76 28 99.3 32 GTTCGCTGCCGCGTAGGCAGCTCAGAAA # Left flank : ATGGTTTGCATTCGCTGATGGCGCAGTCCTGGCTGCAGGGGATGCGGGATCACGTGGCGATCGCTACGCTGGCGCCTGTGCCGGATGGCGCGATGCATCTGGTCGTGCGACGACGGCAGTTCAAGACCAACGCGGACCGTTTGCGGCGGCGACGGATGCAGCGCAAAGGGGAAACGGCTGAGCAGGCTGCCGCGCATATTCCCGATTCCGTCGAGCGCCGGCCTGATCTTCCGTATGTGCGGCTACGCAGCGCGAGCACGGGGCAGGTGTTTTGCCTCTTTGTCGAGCAGGGGGGCGCGGTGAGCGAGCAGGTGCCTGGGGCGTTCAATGTCTATGGGCTGAGCCAGGGGGCGACGGTGCCCTGGTTTTAACCCTTTTCTTGGGCTGATTTGGTTGGCCTTTGAAATCAATGGGTTAGCGAGAGGGCGGAAATTTGGGTGGTTTGCCCTTTCGCGGGTGTTTGTTGTTTGGAAACAATTGGTTGGAGGGGGAGGGGGCTA # Right flank : ATCGCGGTCCGCGCGGTGCGAATAGCCAGCGTATCGGCTGTATAGGGAATTCTAGACGACGCTGATCTATGATTGGCGCGTAGGCGGACGTCATAAGTGCACGGAGATTTACCCCGGGGGGCACGCAGGAAACTGTTCGGCAAATCGCCGAGCGAGGCATTCAGTGGCTAACAGGGGGAGGCGTTTGCCTGCTGAGTGCCACGTCAGGATGGCAATGTTCTGGAAGAATCTGTCCGAGGCCATCCAGTATTTCGGCGCCCAGTTTCGAGGACGAACCGCGCTGTTGAGATAAGACGGCTTATCGCAGGTGGCATTGTCTCGGCCAGATCGGTACGTTTCCCTCATACTTGGCCGGGGCCTGCCCGCTGCGCTCATGCTTGGCCGATTGCGACTTCCCTATCGATCGCCACGCCCTACCTGCCGCAAGGAGCGCACGATGCAGCACCGCATTTTCGCCCGTCAAGTCGGCGCCGGCACCGTACTGCCGCTGGTCGCCATCG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //