Array 1 2727-34 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHZK010000017.1 Novosphingobium sp. BK267 Ga0365264_17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2726 32 100.0 34 ................................ ACCACGATCTCGGCCAGCGAGTGGGAGTCGAGCC 2660 32 100.0 35 ................................ GTGGCTCCAGCGCCGCCAGAACGCCGCCAAGCGCG 2593 32 100.0 35 ................................ CCTGCTGGCCTGGGCGTCGTCGTCGGCGCTGTGTC 2526 32 100.0 35 ................................ ATCATCAGTGAGACGGGCCATAATCAGGCGTGTGG 2459 32 100.0 34 ................................ AGCCCCTGACCCTAACAACCTTGCCTTGCACCCC 2393 32 100.0 34 ................................ GTCTATGTGGCGCTCGCCGCAAACCGGACAGGTA 2327 32 100.0 33 ................................ GGCGCACAGGCGGTGGATCCAGTCACCCATGGC 2262 32 100.0 35 ................................ CTCAACCCGCCCGCCACCGAAGAGGTCGCGGGCGT 2195 32 100.0 35 ................................ GTCACGCCGTGCTGGCCGTTCCCACGCTACGACTT 2128 32 100.0 34 ................................ CGGCCCGGTGCGCGGGTAAAAGCCCAACATCGCC 2062 32 100.0 34 ................................ CTTGGCCAGGACCACGGCGGCGCCCTTGCCGGTC 1996 32 100.0 34 ................................ AGCGTATCGGTCCCACCGACATAGCTGATGCCGA 1930 32 100.0 33 ................................ GGCAAAGGCATGTCGATCGAGCCCACCGACCCG 1865 32 100.0 36 ................................ AGCGCGTTGAGGCGAACGTATCGCAAGCGACGGCAG 1797 32 100.0 36 ................................ GCGTCAAACAAAGCGCTAACTTCGCTGCCGCCCACC 1729 32 100.0 34 ................................ TGCGCCCAATGCAGGCGCGCGTTCGGGCTTAGCC 1663 32 100.0 34 ................................ GTGTCCGGGATCGTGGACGCTGCCGCCGCGCGAG 1597 32 100.0 34 ................................ GTTGCGGGGGAGCTGGGGCAACCTTCCCCACCCC 1531 32 100.0 35 ................................ CTGGTGTCGGGCAGCATCGGAATCGAGGCCAAGGT 1464 32 100.0 34 ................................ GAGGGCAAATGCGCCTATTGCCCAAACGATGCCA 1398 32 100.0 35 ................................ ACGACATAACTGGGGGAGACCAGGCCTATCGTTTT 1331 32 100.0 36 ................................ AGCTTTCAGCCCGACCGCTGGCTGGGCGACGTGGCC 1263 32 100.0 35 ................................ ACTTGCGAGGCAAAAGGTTCTGCGCGCGTCACCTT 1196 32 100.0 34 ................................ CACTTTTGATGGGGCTGCGTTTCGGCAAGCGGCA 1130 32 100.0 34 ................................ GGATAAAGGGACAAGGCGGCGTTTGGCCGTCATC 1064 32 100.0 34 ................................ AAGAACAATATGCGGTTTAGCGGCATCCTCTCGA 998 32 100.0 34 ................................ GACGATCAGCGCATGCGCGGCGATGTGATCGAGT 932 32 100.0 35 ................................ TGGGAGAAGCGGGCCGATCCGGTCATCACCCTGGA 865 32 100.0 35 ................................ TGCGATTACCCAGCGCGTGGAGAATTTCGAGCAGC 798 32 100.0 34 ................................ TTCATTGGCTTGGGCGTCGGCCACGATGCGCTCA 732 32 100.0 35 ................................ ATCGAAATCGACGAGGACAACAACGTCTCGATAAA 665 32 100.0 35 ................................ GGCAAGACCGTCGCGATCACGTCTGGCCTGACGCC 598 32 100.0 34 ................................ TTGGCGTCCTGCGTGATCGCGGGGCGGCCGGCGC 532 32 100.0 35 ................................ ACGCGCAGTGATTGCAGGGATACGGCGCGATGGCG 465 32 100.0 34 ................................ ACGGCGTGGTGTTGCGCGGGCCTGGTCTGCGCGG 399 32 100.0 35 ................................ AGCGCGTCGTCAATGCGCTGCCACAGATCGGGGCG 332 32 100.0 34 ................................ CTGTTGCTCACACCCGCACCCCCGACCCCCTGCT 266 32 100.0 36 ................................ ATCGTCGGGTTGGCGATCAGGAATGCCACGAAGGCA 198 32 100.0 35 ................................ TCCCGCTCCGCGTAGGCCTGTGTGAGGGACGCCAT 131 32 100.0 34 ................................ CTGTGCAGGAAAAAGGTGGGAATAGTCGGGGTAA 65 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 41 32 100.0 35 GTCGCCCCCTGCGCGGGGGCGTGGGTCGAAAC # Left flank : AGGCGATGCTGGTTTTGATCACCTATGACGTGAATACCCAAGACACGGCCGGCAAGCGCCGCTTGCGCCGCGTTGCCAAGGCATGCCAGGATTTTGGCCAGCGGGTGCAGAATTCGGTGTTCGAATGCGAAGTGAACCCGGCGCAATGGGCTGGTCTGAAAGCGGCGCTGGCCCGCGAAATCGCGCCGGAAAAAGACAGCCTGCGCTTCTACCAACTCGGCGCGGCTGGCAAGCGCCGGGTGGAACATATCGGCGCCAAGCCAGCACTCGACCTGGATGGGCCGCTGCTGTTTTGAAAGGCGGACGGGACAAGCTTGGGCATCGGCGCGAACCTCTAGCTGCCCGCAAAACACTGGCATGTTCGCGGAAGCGTAACTGCATGAAATATAGGAATGCGCCCGGTTTCCGCCAGTAGCAGGCTGTTTCGACGCTCCTGCGGTCGAGTGGTTCGCGGAACACGGGCATTTTCCTGTTCTTTGTCATCGTGTAACGCAAACCCA # Right flank : CGATTACGAAGCGCCCGAAACCACCACCATGACG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTGCGCGGGGGCGTGGGTCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [23.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1-2251 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHZK010000007.1 Novosphingobium sp. BK267 Ga0365264_07, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================================================== ================== 1 29 90.6 34 ---............................. GTGTCCGGGATCGTGGACGCTGCCGCCGCGCGAG 64 32 100.0 34 ................................ TCGTACATCGTAAAGCCCCCAGCCCAGCAGGATC 130 32 100.0 35 ................................ GCGCCCGAAAGGCTGCGCAAGTGGAGCGAGAACAA 197 32 100.0 35 ................................ TACCGCGTGCAGGTGGAAGACTTGACGATTACCGG 264 32 100.0 34 ................................ CGCCACATGATTGCCGCCGCGCCCCGCGCCCGGC 330 32 100.0 34 ................................ AAATTGAGTTGCAGCGCTCACTGCTGGGGGAAGT 396 32 100.0 33 ................................ GTGGCCAGGGGCTGAACGATCTCGAAATCAATC 461 32 100.0 35 ................................ TTCGGACAAGACGCCGCGAACCGCAGCATCAATTG 528 32 100.0 35 ................................ ACGCTCAACACGGGCGTGGTTGATCCCCTCACGCA 595 32 100.0 33 ................................ CATTTTCGACGATCGGCATAATTGGGTGAGGGC 660 32 100.0 33 ................................ TGCAACTCAACTGGTTGCTGAAAAGTTGGCAAG 725 32 100.0 34 ................................ TGATCCGATTGCACGGCGCCTTGTATCACGTCCG 791 32 100.0 35 ................................ ACGCAATTTGTGGCGGCGTTTGAAATGGTGGGGAG 858 32 100.0 34 ................................ TTACTATCCGGGGTTATGCGGGTCCGAACGATAC 924 32 100.0 34 ................................ GTCAGCCAGCGTTGTGCGCGCGGCCTGAGTGGCT 990 32 100.0 34 ................................ AGAAATGGGTTCGTCCGCTGCCGCGTGCCAAAGT 1056 32 100.0 35 ................................ AACGGCAACGGAGAAGTTGCACACTTGATCGTCGT 1123 32 100.0 34 ................................ TGCGCCCAATGCAGGCGAGCGTTCGGGCTCAGTC 1189 32 100.0 34 ................................ GGGATGTGGAGCATTTAGGCCTCCACCGGTTCGG 1255 32 100.0 35 ................................ TCACACCTCAAACGCCCAACGAGGCAGCATGACCG 1322 32 100.0 34 ................................ GAGCGACTGGCGCGCGCCAAACGTGCGCTGATGC 1388 32 100.0 33 ................................ TGCCTGATGCTGAGCCCGAGGGCGTCAAGCCCA 1453 32 100.0 34 ................................ CACATCCTGCGTGGCCTGGCCGAAGTGTTCTGCG 1519 32 100.0 68 ................................ ACCGCGCCCGATCGCGGGCTTACCATCCGCAAGTGTCGCCCCCTACCGACAATGCCCTGGCGAGCCTC 1619 32 100.0 33 ................................ CCGCAACGGCGTCTCGTCGTGCTCAAGGACTAC 1684 32 100.0 34 ................................ CAGCGCCTCGACGTGGTTGCGCAGGCGATCATCA 1750 32 100.0 35 ................................ ATTTGCAAGACCGTAGCGAATTTGCCGGCCATAAT 1817 32 100.0 35 ................................ GCGCGGGAGTATCAACGCCTGCATGCCAATTTCGC 1884 32 100.0 35 ................................ ATGCGCTTGATGCCGGCAACGAACCGGCTGATGCC 1951 32 100.0 36 ................................ CAGACCTGTGTCGAGGTGATCGATCCCGACCGGCTG 2019 32 100.0 36 ................................ GAGCAGTGGCAGCGCAGCCTTCTCAGCCTGCGCGCC 2087 32 100.0 35 ................................ ACAGGCTCGATCAGCGGGACGACCTTGACCGTCAC 2154 32 100.0 34 ................................ TGCGCATAGGCCAGCGCCCGGGCAGGGCCTTCAT 2220 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================================================== ================== 34 32 99.7 35 GTCGCCCCCTGCGCGGGGGCGTGGGTCGAAAC # Left flank : | # Right flank : CTCCTCGGGTGGCGCTAGTAAGGGGATCGACCACCGTCGCTCGTCAAGGAGGTGGCCGCAACCGGCTGACCGGTCGTCTTTTGTGTGGGGCGCGAATCGAAACCGGTTCGTCTGCTGAAAACCACACCAGGGTAGAGCAGTCAGCCAGTCGTCGCCGCACCACTGCCGATGAGGCAGAGCGCAACAAGGCGGTCATCGACGAAAACTGACCCGTAATAGGAGCAAGTAGCCAAGAGCCTGCCCGGCGCCATTGGTTTTGCTACCCCGTTGATATCGTCGACTGCTGCATCGCATCAAGCCGCTGCGAAACGGAGGTGCCCTGTTTTTACTGTCAACCGCAAGCAGTTCGTCGTGAATCTCGAGCGTCACATCGATCTAAGGAATATTGGGGGTACAATTAGGGGTGTCACTAAACTGTCTATAAAAATTACAAATAAATTTAATTGTTTAAGTGGTTCTGAATTGCTACCCAGATCCTGCCCCCGCAACCATCTCTCAAC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTGCGCGGGGGCGTGGGTCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 55354-55020 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHZK010000005.1 Novosphingobium sp. BK267 Ga0365264_05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 55353 29 100.0 32 ............................. CTTCTTCATGTGCTCGATCTGCTCGACCGGCA 55292 29 100.0 32 ............................. AGCGCCGTGCAGGTCTTGCCGCCCCACTGCCC 55231 29 100.0 32 ............................. ACGGCCCCGACCTACACATTGCCCACGATTGC 55170 29 100.0 32 ............................. GTGCCGGTATAGGTGCCATCGGTGCCGCCGCT 55109 29 100.0 32 ............................. GTGAGCGCCTGATCCATGGCTGACCTTCAAAC 55048 29 96.6 0 ..........T.................. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 99.4 32 GTTTCCCCCGCACGCGCGGGGATAGTCCC # Left flank : AAAGTGTTCGCCACAGCCTCAGTCGCGCAGCATGGCAACCAACGGCGCCACTTCGGGCCTTTGCCGCAAGTCGGTGCGCAGCAAGGGCGCTGTTTCGCGGGTGTGCCCAACCAGGCGCGCGCCGGGAAACTGCCGCAACCAGAAACCCCGGTTGGCCTTGCCCAGATCGTGCAGATAGGCCAGCACGCACAGCCGCGCGACATCGTGCGCGCCCAGTTCCCGCTCCGCCGCGCGGTTCAGCAAGCGTTGCCAATGCCCTTGCGCCACCAGTTGGGCAAACACTGCCGCCACATCGCCGCCGTGATCCGTCAGCGGCAGGGCTGACCGATGCGCCAGCTCATCAGCCAACTTGGCCCAGGCGCGTGGAATGGGGCTAGACATGCCCCCCACTTTGCCGCGAAACAACGCTACCCGCCACCCGCTTTTGCACAAGGGTCGACGGCACCGCTTGCACAATGCGTCGGCTCTTTCCCTTTGTGAACAGAATGTTGTATAGCAGG # Right flank : AGCAATGGCGTTCCGTCGCCGACCAGATGCGTCCGAGGCTCCCAAGACTGGCGACTTTGATGGACGATGCCGAACCCGATGTCCTGGCATACATGACCACCCGTTTAGAGTTGGATATCCCTCTTACCGGCTGTCCAGCCGATCCAGCCAAGCTTGCGCCTGCTTGGGCTCGCCTACTGCATCCGACTTGACAGGCCCACGAGATGCGAGGAATTCCTGTTGAAGCGCGAAAGGCGGCATGCCGAGCTGCTCTCTCATTTGGTCGATCGCCTGACCGATTTCAGCCAAATTTTCGATGATCGGGGCTACAGCCTTGCGCGACCAGCGGTCTGCGTTGTGATCAAAAAGGCCCCATTTTCCTGCAGCCGTAACGCGCAAGGCATCAATCAGCGCTGCCATATATTCCGTTTCAAGTTCTGTACGACGAACGTCGAGGCGTTCCAACCTATCAGCCTTTGCCATCCTTTGATTGGTATATGGTCACGCCGCTGTCCGCAACG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCCCCGCACGCGCGGGGATAGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 2 64184-64577 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHZK010000005.1 Novosphingobium sp. BK267 Ga0365264_05, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 64184 29 100.0 32 ............................. CGAAGAAGCGGAGGCCTGACCATGGAACATCA 64245 29 100.0 32 ............................. ATCATGCGGCCGATCACGCCGGCGCCGCCGGT 64306 29 96.6 32 ..........T.................. GCATCCAGCAGTCGAGCGAATTCCTCTCCTCG 64367 29 100.0 32 ............................. TCGTCCGATCGGTGCAGCGGCGTCATGAAGAA 64428 29 89.7 32 ..........T...T.........A.... GGGGAAAGTCCGGCCTCGGGCATGGCGCGCAT 64489 28 89.7 32 ....-.............A.....A.... GCCTCCCGATGCGCCCGATAGTGATCGGCCAA 64549 29 72.4 0 .............CA.......C.ACATT | ========== ====== ====== ====== ============================= ================================ ================== 7 29 92.6 32 GTCTCCCCCGCACACGCGGGGATAGTCCC # Left flank : CGTGGCCGAAGCGCGCGGGCAGCCGATCGAACGGGTGGTGCGCCAGCGCGCCGCGCGCCTGTTCCGCCAGCGCGGAATCATTCCCACGATGATCGACCAGATCAAGAGCCTGCTGGCCCAGGCGGACGAGGCCAGGCCCTGATGCCGCTGGTCGTGGTGATCACCCGCGACGTGGAAGACCGCTATCGCGGCTACCTCGGCTCGATGATGCTGGAACTGGCGCCAGGCGTCTATGCCCAGCCCCGCATGTCGGCCCGCGTGCGCCAGCGCCTGGCCGATGTGCTGGCAGACTGGCACGGCCGCCTGGGCCGGGGCAGCATCGTGATGTGCTGGGCCGAAACCGCAGCCAACGGTGGCCTTGGCCTGCGCACGTTCGGCACGCCGCCCAAGGACGTAGTGGCCCATGACGCGATGTTGCTGGTGCGCCGGCCATTACCGGAACAGCCCGAATCCCGGTGAATTTGCTCTTTCCTATTGTAAACAAGATGTTGTATAGTAGG # Right flank : TCGCGCGTCGCGCAGTATCCGCCATGCGGCGCCCCCTGCGTCTTGCCCAACTCCCCCTTGCCCGCTGCCACGCAGCGGTGGCATGAGACGGGCATGCCTGCAGATCTTTTCCGCGCTCGATTTCACGCCGTTGGCCAACGCGGTTACCGGCTTGCGCGAGGGGCTGGTGCGCTTTGCCACCGATGAAAGCGATACGCAGATCCGCGACGGGCTGATCCAGCGCTTTGAATTCACCTATGACCTTTCGCACAAGATGCTGCGCCGGGTGATCGAGGCGGGGGCCGCCAATCCCGAAGAGGTGGGCCGCATGACCTTTCCCACTCTGATCCGCACAGCGGCCGAACAGGGGCTGACCGGGGCGGACTAGACCGATTGGCGGACGTGGCGCGAGATGCGCAACATCGCCTCGCCCATTGCGGCGTCGCCACCTCAGACAGAGCACACCCCGTATCCGTTCGCCCGCGCTAACTGCCAGAGTAGCAATGAATCGGGATACACTT # Questionable array : NO Score: 2.74 # Score Detail : 1:0, 2:0, 3:0, 4:0.63, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCCCGCACACGCGGGGATAGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //