Array 1 51634-54476 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011380.2 Moraxella bovoculi strain 57922 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 51634 36 100.0 27 .................................... ATTCGTGCGTATTTGATTTCTTTGTGT 51697 36 100.0 29 .................................... CTCTCGCAAAAGTTCTTAGCAGCTTGCCA 51762 36 100.0 26 .................................... CTTTCTGTTTTTCTTGATAATTTAAA 51824 36 100.0 27 .................................... TTTAATAGACGCTTCAGCTTTATTGAT 51887 36 100.0 28 .................................... GGATCATCTCCAGCGCTCGAAAAATTTA 51951 36 100.0 28 .................................... TTTAACAACGCTTTTTCTGTAATTCATG 52015 36 100.0 28 .................................... GCAGCCGCCTCGTTCGGGGTTTTTACTG 52079 36 100.0 27 .................................... GCAAGCTGGGCTATGTTTGGGTAAGAG 52142 36 100.0 26 .................................... TAGCTAATTTGTGATTATTTTGAATA 52204 36 100.0 28 .................................... AAATCGACCCGATCGCATACATTGAGCG 52268 36 100.0 27 .................................... TCTGTCTTAGGGTCATAAGGTTTGCAG 52331 36 100.0 27 .................................... TCGGCTGATTTTGGTGGTAATTGCCAC 52394 36 100.0 28 .................................... CTTATGAACGATGATGGGCGATCTGCAA 52458 36 100.0 26 .................................... CCGAGATTCTGCCTAGTGCCATATCT 52520 36 100.0 27 .................................... TCAACGGCAGTCAATAGCGACCAATCC 52583 36 100.0 28 .................................... GGAAGTAGTTTTTGGACAGCTTCAAGCA 52647 36 100.0 27 .................................... AAGGCTTTATGGTCTGATCAATCCAAG 52710 36 100.0 27 .................................... GTTTGTATGTTTATTGTCTTTACTGTG 52773 36 100.0 27 .................................... TTAACAACCACATCACGAGCTTATTAC 52836 36 100.0 28 .................................... TTAAATACTAAAGCCAGTTTGCCTTGGC 52900 36 100.0 28 .................................... ATTAGGGGGATAGGGTTTAATTCACCCA 52964 36 100.0 26 .................................... ACGTAACAGTCGGTAAGGTACTTGCC 53026 36 100.0 27 .................................... AAGCTAATCTGCCAAAAGTTGCCTTTG 53089 36 100.0 31 .................................... AGATGCAGTCTGATGAAAATAGCAAGCTTAG 53156 36 100.0 27 .................................... CAAGTTCCAAGTGCCTGACTTAGGTAC 53219 36 100.0 31 .................................... CGCGCGCGCCACTTGACATAATTACTCCTAA 53286 36 100.0 28 .................................... AGCGATAGCGGTAATTGATTCAGAGCCA 53350 36 100.0 29 .................................... TCAATAATTGACTGCCTAACCTTCGCAGA 53415 36 100.0 30 .................................... GCCTTTTGTGTCTCACGCTCCGCCTTTTGC 53481 36 100.0 28 .................................... AGCGGTATTACTCGCCTTTGAGCCAGAA 53545 36 100.0 28 .................................... GGTAGATGTATGTAGCCGTCTTTGATGT 53609 36 100.0 29 .................................... GCGGTAGCGTTGATTGCGGTGGTCGCTGC 53674 36 100.0 27 .................................... GACAATAAACCTTATCGCCCACTTTAA 53737 36 100.0 29 .................................... ATCATCAATCATGCCTTGGTAACGTCTGA 53802 36 100.0 28 .................................... ATGCGTATATGTCGCCAACGGTAGCGGT 53866 36 100.0 31 .................................... TTCAAGGCTTCTTTTGCCATGCACGCCCTGC 53933 36 100.0 26 .................................... ATTAGCCCCTTGTGGGCTTTTTTGTT 53995 36 100.0 27 .................................... GGCAGCCGCCTCGTTCGGGGTTTTTGT 54058 36 100.0 28 .................................... TAGGTGCTTGTGATGGTCGTATATTGTC 54122 36 100.0 27 .................................... GACAGCTTCAAGCAGGGCATAACGGAC 54185 36 100.0 29 .................................... CTGAAGATGGTAAGTGCCATCACAAAGAT 54250 36 100.0 26 .................................... TTTGTGTAAGTTTCGCACTTCTTCTA 54312 36 100.0 28 .................................... CAATCGCAAATTCATCACGCACGTGCAC 54376 36 100.0 26 .................................... TGAGACCCCAATCAGTAACAAAAAAT 54438 36 91.7 0 .................G............C...G. | TC,A [54466,54472] ========== ====== ====== ====== ==================================== =============================== ================== 45 36 99.8 28 GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT # Left flank : TGGTTTTGATGTTGCCAAGCTTTGACATACAAGCAAATGGAGAAGATGTATGATAATCGTCAGTTATGATATCAGTGATAATAAAGTGCGTGGACGATTTGCCAAATTTTTAATGCAATATGGCGATAGATTGCAATATTCGGTGTATGAAATCCAAAACAGCGAACGCATTTTAAATATCATCACCGAAAAAATAAAAGCAGAATTTGAGCCTTTATTTACAGGGGCGGACAGTGTCATTATCTTTCGATTTACAGAACGTGAAGTATTAAGGTTTGGCCATGCCAAACATCGCAATGAGGATTTGTTGATTTTATAAAAAGTCTTGGAAAAAATGATGAGGTTTGTTATAATAAGAGAGCTAAAGCACGCTCAAATATTTACTTTGCAAACCTCAGTCTTAATGCGTGATTTATCATGTTTTGTCGGTAAAAATGATTATTTTTTGTGCAAAAAACTTGCTAATCTCTCAAAAAATCATTAAAAATACCCCAAAACGG # Right flank : TATGAGAATTTAAATGGCTGCGAAGATCAAAAGGCATTATTTCATTAAAATCCCAAAATCACAGATTTATTTTTCTAAAACACTTGTATCTTACGAATTATGATTTATAATATTAACTTATACATATATTACTAGGATTTATAATCGTGAGTACTACGCTGCGCCAGTTGCGCGCTTTTGTGTTGGTAGCTGAGCAGAACAGCTTCACAAAGGCCGCTGAGACATTATGCCTGACGCAATCCGCCTTAAGCGGTCTGATCAAGGAGCTTGAGCAGAATTTAGACGTTAAGCTGTTCGACCGCACCACACGAAAATTGCACCTATCCGATGCGGGCATGCGCTTATTGCCGCAGGCGCGCCGTGTGCTCAATGAGATGTCCGTGCTTAATGAAAAGGTCTCCAACCTAAAGTCCTTGCACCAAGGACACATTCGTCTGGCGGTCTCACAGCAGCTATCCGCATCGACGATGCCTAAGTTCATCGCTAAGTTCTGTGAGCTG # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 458963-457956 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011380.2 Moraxella bovoculi strain 57922 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 458962 36 100.0 33 .................................... TCTGCATAAAAGTTGAAGATGAGCGATTCATGT 458893 36 100.0 34 .................................... CTTGCAGAATGTCATTGTTACTGAATAAAGCTAG 458823 36 100.0 34 .................................... TTTAGGCAAAGGGCAAAAGTGGCACGGTAGTTAT 458753 36 100.0 34 .................................... AATTACACCTGCACCTAGTTGGTCTAGAGTAGCA 458683 36 100.0 33 .................................... GTGTGCGTTATAAGTCATTTTTGACTCCTTTAG 458614 36 100.0 32 .................................... TTCCTTGGCTCTGGGTATTGGTAGGTATCTAC 458546 36 100.0 34 .................................... TTATCCCTGTCGTGTACTACCAACAAAGTGCGTC 458476 36 100.0 33 .................................... AACTAAAAGCATTGGGGTTCACACAGCTGTAGC 458407 36 100.0 34 .................................... GGAATGCGCACACCATTGACTACCGTAGGTTGGG 458337 36 97.2 33 ............................G....... AACAAACGCTCTGCTTGCTCTCTGTAATACTCA 458268 36 100.0 34 .................................... CTACTCAACGTAAATTATAAGAGACAATTGTCTC 458198 36 97.2 32 ..C................................. TCTGCCATTGCTTCTTTGGCGTGTGAGCGTAA 458130 36 100.0 33 .................................... TGTTTCTCTGCAGCATTGAGATATTCAACGAGT 458061 36 100.0 34 .................................... AATATCGTTTTCAAGAAGTTCGATTGTATGGCAA 457991 36 83.3 0 ..........................AA...TCA.T | ========== ====== ====== ====== ==================================== ================================== ================== 15 36 98.5 33 GTTCAAAACCTTCCCTGTTATAAAAGGGATTAAGAC # Left flank : TAACTTATTTGATGTTAGCATTATGACAACAAAGTCTCTTAATTTGGGGTTTGATAAGCTTACAAAAGTGAGCATACTCACTAAACTTATTTAATCACAAGACAAATCAACATCTGCCCACAAATTAAAAATCACTATCAGCAAACGACCCAACCAATCTTGATCTGTTGTATGATACATCTGAATGAATTTCTCGAGTGGTTTCGTAAGCTTATCTCGACTAGCATCAATCGGAGTCATAGCCGCAAAAAGCATTTGCAATTTGGCAAAAAATCATTAAAATAACCATATCGTCTTGGACGACAAGATGCCGCTTGATTATTTAATAGCTTGTTTTTTTTGAATAATCCTAATGGGTGTCAAATTTATAAGTTATTGTTTTTTAAGGATATTTAATTATTTAGATTTCCTTAATCTACATTAACTTTTATTAAACAATTTTTGAACAAAAATTTGATCTGTAAGCGTTTGATTTTACTTGTTATTTTTGAATGGGTGCA # Right flank : TTTGGATGTCCCATGCCACTCCGATGAAGTGTAGGGCTGGCATGCGTAGGTGCGGCTGAATCTATACTCTTCACCGCACCATCAGCCAATCTTGATCGCCACACACCATCCAATATCAACTCACCTTTTCCACTACTACCAAACACAGCCCGCATTAATCACGCATCGCTTTTTGTCTTGAAATGAGGTAAAATACCTCCATTTATTTTTCGCTTATTTAATATTATAAAAAAAGGCTAAGCCATGACTGTCGAAACTTATACCCCAAGTCCCAAGCCCGCCCCAAAAAAAGCCGTCCAAGGCGAAAAACTGCGCGGCTATGATAAAGTCGCTCGCATTCCCATTAAAGTCATTCCCACCGTTGAAGCCCCCAAAAAGCCCGACTGGATTCGTGTCAAATTATCCAGCCCTGCCGAAGTGGAGCGTATCAAAGGCACGCTACGCAAACAAAAGCTCTACACCGTCTGCGAAGAAGCCGCCTGCCCTAACCTGCCCCAATG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAAACCTTCCCTGTTATAAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.00,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 3 476918-477300 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011380.2 Moraxella bovoculi strain 57922 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 476918 36 100.0 33 .................................... AAATAGAATGAAATTTTTTCGTTCGGTAAATGC 476987 36 100.0 34 .................................... AAAATCTATGCAAGTCATTGGGGTCAAAGTTTTC 477057 36 100.0 34 .................................... GTAGGGCGGTGCGTGCAATCTCTGCGAACGTCCG 477127 36 97.2 34 .................C.................. CTGATGCAGAACTTCTATCTCACATTACTCGTGA 477197 36 100.0 32 .................................... ATAAGATATTGTTTAATATCTTGTTCAATACA 477265 36 88.9 0 ...............................TGTG. | ========== ====== ====== ====== ==================================== ================================== ================== 6 36 97.7 34 GTTCAAAACCTTCCCTGTTATAAAAGGGATTAAGAC # Left flank : CATATCTTGCAAAAGACGTCTTGCCAAAGTCTATCGGCTTATTAGCAGCCATGCAATACCCATACAGCGTTCGGTGTATTTTGCCACGCTCAGGGCTGCCGATATGGACGCCATCATCGCACGACTAAAGATAATCATCACAAAGGAGGATGACGTTAAGATATATGAAACGGAATCATTAGAAAATGCACACATTCAAGGCAACCGCTCGCCAAACATACAGCTGTTCGGCGAAAATGGGGGTCAAATCATGTGGTAAAATGCTTGTGGATTGCGATGATTCTTGTTAAAATAACCGATAATTTGACGTTGGTCGACTATTTAATAACTTGGTTTTATATAAATAATCCTAATCGGTGTCAAATTTATAAGTTATTGTTTTTTAAGGATTTTTAATTATTTAGGCTTCCTTAATCTACATTAACTTTTATTAAACAATTTTTGAACAAAAATTTGATCTGCAAACGTTTGATTTTACTCGTTATTTTTAAATGAGTGCA # Right flank : CTTGTCTGCAATTATTTATAGAGCACCATTATTAACAAATCCCGCCCTAATCTTGAGATGGTTTATAAATCTCAGGGTTGGGGCGGGTATTTTGGCTGTCTAGGCTGTCGGTGAACTGTATTTAGGAATGATAAATCCTTAACCATTTTTTAAATAAATGTTGGTTATGAGAGATAATTTTTTGAATTTATGCCAAATTTCAGTTATTATAATTAAGAGTAAATTTAGGCGAAAATGCCTGTAAAATCAACGTCTAGGCACTTGATAATTGTTTGTATAATGATAACCACTATCAAGCACTTATGACCTCACATGGAGATAAAGCTATGTCGCAAATGCTAACTGAATACAGAGCTCACGTCGCTGAGCGTGAAGCGCTAGGTGTACCACCACAGCCATTGACCGACGCACAGACAGCAGATCTGGTAGAACTACTAAAAAACCCACCAGCTGGCGAAGAAGAATATTTGGTTCATCTATTAGAGAATCGCGTACCAGCA # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAAACCTTCCCTGTTATAAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.40,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 4 827303-832614 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011380.2 Moraxella bovoculi strain 57922 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 827303 32 100.0 34 ................................ TCCTCTCTTGTTTTGTTGGATTTATTTTCTTTAA 827369 32 100.0 34 ................................ TTTGTATTTGTCTGCAAGCGCAGCAAAATCTTCA 827435 32 100.0 33 ................................ AGCATCATTGACTTTGATGATGATACAGTCAAT 827500 32 100.0 35 ................................ AACACCATCAGACACACCGCCTATCGCATTGCAGA 827567 32 100.0 34 ................................ AATAGCGGCGAGATTAGCACCGAACGGTTTAAGG 827633 32 100.0 34 ................................ TCAAAGTCGATTATTTGCCCAATGTTGATATCAG 827699 32 100.0 34 ................................ ATTTGTTGAAGGTGTTGTTTTTTTAATTCATCCA 827765 32 100.0 34 ................................ ACGCCAAAATCCGTGAAATCGCCAAAAACATCTT 827831 32 100.0 34 ................................ ATGCCCATAGTTAAGCCCCCTTAGTTGCATTACC 827897 32 100.0 34 ................................ CATTGCGTTAGTAGTTCGTACAATCGAACACTAT 827963 32 100.0 33 ................................ TCTGATTTTCGCTTCGCTACAATCAGAGAAACC 828028 32 100.0 34 ................................ TTCCTAAACTCATAAAAGCCCCCAAAAATTTAGC 828094 32 100.0 34 ................................ AATAACCTCACCTTGGAACACCACACGCCATCCC 828160 32 100.0 33 ................................ ATTGTGTATTTATTCATTTTTTTTCGTCCTTTA 828225 32 100.0 34 ................................ ATTTGTGGGCATGAGACAAGAGGAGTCGCACGCT 828291 32 100.0 35 ................................ CGCACAAAGCACCTTAACGAATGGGTGGGCGCAAA 828358 32 100.0 34 ................................ TCTTCAAGGGGGATAAGTTTGTCGCTGTCGTGGC 828424 32 100.0 34 ................................ TATCACTCGGCTGTCAGGCAGATAATAGCGCCCA 828490 32 100.0 34 ................................ AAAGATGGGGGTAAGTTTGACAGTTTGATTGACG 828556 32 100.0 34 ................................ TAGTGCTCTAATGCGTTTATCTAGCTTGCTGACT 828622 32 100.0 34 ................................ TATATCTTGTTGGTGTCTTTAATTCTTGCCATTT 828688 32 100.0 34 ................................ TCTGTTAAGGTAAACACAAAAAGCGCGAAGTCTC 828754 32 100.0 33 ................................ CCGCTATCTTTTTGGCGAAAAAATGACAAAAGA 828819 32 100.0 34 ................................ ATTTTAAAAGCGTATATAGCGTTAGGCTATATGA 828885 32 100.0 33 ................................ GACGTTGAGAATCGCGAGTACGGAAGCAGAATA 828950 32 100.0 34 ................................ TTCCATTTCGTGGCCGCTTGAGCTGACAAGTTGA 829016 32 100.0 34 ................................ TTTTAACCTATGGTTACATGATACGCCTTTTCGG 829082 32 100.0 35 ................................ ATCACTAGATAATACTTTAATGTTATTAGGGATAT 829149 32 100.0 35 ................................ ACTGTTCAAGGTGTGCTGTTTGGCATGAATTTGGG 829216 32 100.0 34 ................................ CTCCGCTAACTCCGCAACCGTCTTTTGATTGGTT 829282 32 100.0 33 ................................ TTTTGTGTCCCCCAAAAGGTGTAGCAAGCAATC 829347 32 100.0 34 ................................ TTTGGCGGTGTCACGGGTGGCTGATAATCGCTTA 829413 32 100.0 34 ................................ CGCTCGATTTGCATCAACTTGAATGTCTAACCTG 829479 32 100.0 33 ................................ ACTCAAAAATAAAGAATCTTTGTTAGAGTGGAA 829544 32 100.0 34 ................................ TTTACTCGTTCTCAACCCGCCCTAAAATTTCCAA 829610 32 100.0 33 ................................ GGCATCAACGCCATCATCGCAGACAGTGATGAT 829675 32 100.0 34 ................................ ACGCAAGGTTTTGGCGCGATTAGCCCCTAGTTGG 829741 32 100.0 34 ................................ CCATCGACTTAAATCGCTTGGCGGTGGCAATGTG 829807 32 100.0 33 ................................ AGTGAATCGGTTAGACTTTTTAGGTCTGTATGT 829872 32 100.0 34 ................................ TCAACTTTTATATAATAGGATAATATCCTATTCA 829938 32 100.0 35 ................................ CCTACACAAATTGACCCAGACCCAGACACTGGCTA 830005 32 100.0 33 ................................ TCTGATGACCCTTAAACCAGATGCGAATGTTTT 830070 32 100.0 35 ................................ TCTATCACAAGCCTTTAAAAAAAGGCTTGCAAAAA 830137 32 100.0 33 ................................ ATCGTTGCAGCTGTTTGATTTGCTTGTGATAAC 830202 32 100.0 34 ................................ TTCAGAAGTCTGAAGAATTTAACCCAAACCCAAA 830268 32 100.0 35 ................................ AGCGGCTTGCAAGGGGAGACCCCTTGACCCCCAAA 830335 32 100.0 33 ................................ AAATGACGATGGCACGCATTAAAATAACGCTCA 830400 32 100.0 34 ................................ AGCGCACGATTTACGCCCTCCCATTCGCTACTCA 830466 32 100.0 34 ................................ TCCCATTTTGCTTGATTTGATTGCACAAAAATTA 830532 32 100.0 35 ................................ AAATCGCCCATGAAAATCAGGTGGCTGATACGAAA 830599 32 100.0 35 ................................ ACGACCGTCATCTTTTGAATAACTACCAGTCAGAA 830666 32 100.0 34 ................................ TTTTCTGGTCGATCTGGGCGACCAAATCACGAAT 830732 32 100.0 34 ................................ GTTATCACGCAATCTGCACGCTGGGATAGTGCCT 830798 32 100.0 34 ................................ GTTTGCCTTTGGACTTGTTCGTGGTAATCTCATA 830864 32 100.0 34 ................................ ACCGCGGTACTTACCGCACATTGCCCAATGGCAA 830930 32 100.0 36 ................................ AGTCTGCCTTTGTATTTGGAGCCAACTTTTCATCAA 830998 32 100.0 35 ................................ GCTGCCGATGTCGTAGCAGGTCAAGATGATTTGGA 831065 32 100.0 34 ................................ GCAACAACAGTCGCACTAAGCATGTTATTACTCA 831131 32 100.0 33 ................................ TACCTGCGCCATCTGTCTGTCATCGAATACAAT 831196 32 100.0 33 ................................ ATCAGGCTCTACATACTCACCCAATCTGTCATC 831261 32 100.0 34 ................................ ATCTGTTAGCGTATCAATTTTTGTATTTTCTTGC 831327 32 100.0 34 ................................ ATATTTGGGTTGCCAGTCTCGTCAAAGAAATAAA 831393 32 100.0 34 ................................ TGCATTGTCCAATTGTATTGCGCCGCCTCCCATA 831459 32 100.0 33 ................................ ACCAAAAGTTATTGTTTGAGGTTCGTCTTTTTT 831524 32 100.0 34 ................................ AATGGTTGGGTAAAAAATATCACGGATTTGTGGA 831590 32 100.0 33 ................................ TCACCGTTTCAAGGGCTTTTTTTGCGTCATCGG 831655 32 100.0 33 ................................ CACCCATCATCCAACATTGCTTGTATCACTTCT 831720 32 100.0 34 ................................ TAGGTAATGACTCATGGTGTGGCTGTCGGTGTTC 831786 32 100.0 34 ................................ GCAACATTGGCTATCCAAGTAACGCAAACAACTT 831852 32 100.0 35 ................................ TCTTTGACTGGCGTTGGTTAAAATTTCGTTTAATA 831919 32 100.0 37 ................................ TTATTGATGAGATAAGAATTTACAACCATTAGGACAA 831988 32 100.0 35 ................................ TCCTTGCCTGTTTTGGCAACAATCACGCTGTTAAA 832055 32 100.0 34 ................................ CATCATAGCCCCTTTGCTATCTGTCTTTGTTCTG 832121 32 100.0 34 ................................ TTATACTTATGAGTTGTGGCAAGCCAAAGTACGC 832187 32 100.0 34 ................................ CGTTTCAATCGGGTAGAAATACTTGGAAATATGC 832253 32 100.0 35 ................................ TTGGCGTAATCTTGGCGTAATTTTTTGGTTATTTT 832320 32 100.0 34 ................................ AGGTTAGTCCAGACGGTCGCTCCAACATTAGCAC 832386 32 100.0 33 ................................ ATTTGCCAAGCATTCAATGGCAAATTGCACCGT 832451 32 96.9 34 ............G................... AAAAGCCGAATCTTAGAAAAAGCGATCGAAGAAA 832517 32 96.9 34 ..........................C..... TGTTGCTAGCATGCAAATCAACAATGGCAAAAAG 832583 32 87.5 0 ............................TGCA | ========== ====== ====== ====== ================================ ===================================== ================== 81 32 99.8 34 ATCGCACCCCATACGGGTGCGTGTGTTGAAAC # Left flank : GATGATGAGATATGTTGATGTTAATCAGTTATGATGTGGCGATGGACGATGGCGGACAAAAACGCCTAAGGCATATCGCCAAACATTGCCAAGATTATGGCGTGCGAGTGCAGTACTCGGTGTTTGAGTGCGACATCATGCCCGACCAATGGGTGGTATTAAAAGACAAGCTATTAAAGGCGTACGACCCTGACAAGGACAGTTTGCGGTTTTATCATTTGGGCAGTAAATGGCGTGGCAAAGTGGAACATCATGGGGCAAAAAAGAGTGTGGATTTGTTTCAAGATACGCTGATATTGTGATAAAAAAGAGGTAAATCATGGCTCGCTAACGGGCAGTTCCCATCAAAATACAGGCAGGTTAGCGATGAGCTAAGTTTTTGAATTATTTAACAATTGAAAATAAAAACAAGTCCATTTATAATCAATGGTCTTTTTAAGGCTTAGGTTAGCGATTTTACCCAGTCTAAGCCTTAAAGATATAGCCTTTAAACAAAGGCT # Right flank : AAAATCCATACCTTCTTGACCACCTATTCCAGCCCCAAATGGACAAAGATTCCAATTTAAAATGACCAGTCATTCCGATAAATGCTGGTCATTTGATTTTTTTATATGATTGTTATTTGGATAAATCTAATTGATCATATAAGTCAATTTTTCCGCATGGATTCCCCTGTTAATGTAATAGGATATGATCGGTGAATAATGCGATCTAATATAGCGTCAGCAATGGTCGCCTCAGAAAATAAATCATGCCAATTTGCAACAGGATACTGGCTAGTTATCAGCAGACCTCCAACACTAGATTGCTTGTCAATAATGTCCAGTAACACAGGGCATATCTGTGGTAGCAATTCACCTATGCCAAAGTCATCAATGATTAACAAATCCACCTTGCAATATTTTTGCTTAACCTTGGCAATACTACCATCAGCGATTGACAAAATGATATCTTCATACAAATCAGCAGCTTGAACAAACATCACTTTTCTTAAATTTCGGCAAGC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACCCCATACGGGTGCGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.70,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 5 853054-853282 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011380.2 Moraxella bovoculi strain 57922 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================= ================== 853054 33 100.0 32 ................................. AAGAAATCACTAATGGCTCTTTTATTTTTAAT 853119 33 100.0 32 ................................. GCGTTTGGGTGCGGGCGGTACGCCAAGGCAAG 853184 33 100.0 33 ................................. CAATCTCTTTGAGTTGCTTGGCAATGCCTTGGC 853250 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ================================= ================== 4 33 100.0 33 ATCGCACCCCATACGGGTGCGTGTGTTGAAACT # Left flank : TGAGCGGACACTGTCAGGTGATATGGGAGCAACCATTCGCCAAAATGTCAGCTTTCCCATCAAACAATCCAATCACAGCCTATATCTGGCTCTGGATGCTGGCAGTATCGCCATGTCCAATAAAGAACAAGACAACCTACTGCTAGGACACACCCTCATCGGTGGTGCAATCGGCATCAAAGGACAAATCAAGCCACTACGCCTAAACTACGACTTCTTTGCAGGACACCCCATCAGACAGCCTAAATACTTTGGTGATAAAGATTGGGTCGGTGGGATGAGTTTGGGGGCAGGGTTTTAACCACATGGTTTTTTTAACCAGCAGACAAATAAATCCTGCGTAAACCATCAGTTGGGCATTGGCTTGGCTGGTGGTTTTTTATTAGGCGATCAAATAAGACCAGAATAAGTGGTCACATGAAGAATGGAATGGGTGGTCATTTGAGGTGGAATGTGCATGTTGAAACGGACAACTAAAATCAATGGCATAGCCGTATAAG # Right flank : TCAATATCTTAATCTGATTCAAAAGTCCTACCAGGATTGGAAAAGGCAAGGCAATAATTCACTTGATTCTTCTTCATCTTTTGTTTGATTTATTTTTCTATTTTACTGGATTATTTTCTAAGTTAATGCCTGAGCAATAAGAGGGGTTAAATCGTTGCATCTAAGTTTTTAATAATCACCATTATAAGAGCGGCAAACAAGTGATTTTATTTAGCTTAATTTAAGAAATGCTTTGTTGTTTTTTAAGTGTTTGCTTTAAGTTGATGGTCATATTGAAGTCATATGCAAGGCATACTATAATGTGACCTCTTAAAACATATATTGATTGCAAGGTTAGATCATGATAAAAATCGGTCAAGGCATAGACGTTCATGCTTTTACGACAGGCGATTTTGTAACGCTTGGCGGTGTGCGTATTCCTCACACGCACGGCATTAAGGCTCACTCAGATGGCGATGTGTTGTTGCACGCTTTGGCGGATGCACTGCTCGGAGCGTTGG # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACCCCATACGGGTGCGTGTGTTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.70,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //