Array 1 1250-2750 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIDV01000126.1 Bacteroides fragilis strain 2-078382-3 contig00129, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 1250 47 95.7 30 ...A......A.................................... GATTCGAAGATATGCAAATGTAGCAAGTAT 1327 47 100.0 29 ............................................... GACAAAAATATGGCACGCATGACCGAATG 1403 47 100.0 29 ............................................... TTCAAACGGTCTAAAATGCAAATTATTAG 1479 47 100.0 30 ............................................... TTTTCGGGCTGAGAAAGCATGGTGTTGACG 1556 47 100.0 30 ............................................... ATTCGGATTCTGAGAAAACAAGTCTACAGT 1633 47 100.0 30 ............................................... TTTCATAATTAAAACCTTCGTGCGACCTAT 1710 47 100.0 29 ............................................... TTCATGAATGGCGGAAGTTATACCGGTAG 1786 47 100.0 30 ............................................... TTTCTCGCAAGAACACCCTCTAGCGACTAA 1863 47 100.0 29 ............................................... TTCATCAGGCAGAAGATAAACAATACTTT 1939 47 100.0 29 ............................................... TCCTTTTAACATCCAAAGAAGCTCATATA 2015 47 100.0 29 ............................................... ACAAAGAGGGTGATATACTCAAAACGAGA 2091 47 100.0 29 ............................................... GGCGTTCTTGACAAAGGTAGACAGGCAGG 2167 47 100.0 30 ............................................... GACTATTTCTCCCGGTTCTTCCGGCTCTGG 2244 47 100.0 30 ............................................... ATTATGTATGCAAAATTCACACGTACCGCA 2321 47 100.0 29 ............................................... GGGGACAAAGAACCATTCGTAGTATTCGC 2397 47 100.0 29 ............................................... GTTTTGTGTTGGATGTCTGCGACTCAGAC 2473 47 100.0 30 ............................................... AGGAGCAACCCACGAACGTAAGGTATCTGT 2550 47 100.0 30 ............................................... AAGAATAACGCTAATTACCATCAAAATAGT 2627 47 100.0 30 ............................................... CCATTCGCTGCCATGTTAAAACACTGCCTT 2704 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 20 47 99.8 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC # Left flank : TTCAGGGGCGGAAAGAACAAAGCTTTGGCTTCGAAAAGACTTGTTATTTGGAAACAAAAGGTTTGATTTAACAGAGGGTTAAATCAAGTTATAGGAAGAGGAAAAACAAAAGGAGAGAAAGTATTGAGGATGAAGAAAATAGAGAAAAAGGGAGTATTTTCTGGGAAAAGGGATAAGTGCTGGTCCGAAAGGGATAGTTGTGATTAAAGCAAGTATGGGGGCAGGGAATTTTAAAAAGCAAGGTTGGGAATGGAAGCGGGAGGAGCTTACTGTTAAAGACCAAAGGACAAATTACAAAATATTATCCAATTAACAAACCGATAAACAATCTATTAAATGGTTATTCACAATTCGAAACAGCTTCTAATGGTAACTATATTTAAACCGTCTAATCAGATACACTTAGTAGCATACTTTTCAATTACTAAGTAGAGTACTTTTTAATTATTATCTACACCATCATAAACAGCATATACTATCTGATGAAGACAAAGCGATGC # Right flank : CTTACCCCGCATAACATAATGTTCTTCAACAAGTTAAGAATAAATTAGAAAAAAGAAAAAGAAGACTGTTTCCAACACAAAATCTCGCATTAATGCGAGATTTTGTATTCTAGAACAACTCCAATTGCTGTCCCGGCGTATTGACATCTTGCACTTTCTTTCCATAAAAAAGCTCTATATCTCCAAATTGTTTATCTGTAATACACATGATTCCGACATGCCCAAATTCTGGGAGAAATGATTTAACTCTTTTTATATGTACTGCTGCATTCTCACTACTGCCACAATGACGCACATAAATGGAAAACTGAAACATCGTAAAACCATCCTTTTGTAGATTCTTTCTGAAATCGGCATAAGCCTTTTTTTCTTTCTTAGTCTCAGTTGGCAAATCAAAAAGAACAAGCACCCACATAATACGATATTCATTAAAACGATCCATAATCTATCGTTCGGGATAGGAAATTCTCCGAAGCTCTCCATTGAAACATTTATAAAGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //