Array 1 212-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV818636.1 Corynebacterium sp. HMSC065A05 Scaffold90, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 211 29 100.0 32 ............................. GAGACTCCATTATGTCCCACTTGTCCGAAAAC 150 29 96.6 32 ............................C GAGCGCTATGGTCGTCTCTCCCTCCCACGTGA 89 29 100.0 32 ............................. GGAAAAAGATTATCAACACAAAAGGTATGCAC 28 28 96.6 0 ............................- | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCG # Left flank : G # Right flank : C # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-1.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 47845-47450 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV818665.1 Corynebacterium sp. HMSC065A05 Scaffold190, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 47844 29 100.0 32 ............................. GCGTTATACGGTGCTAGGGGTAAGTGAGCTTA 47783 29 100.0 32 ............................. TGGCCAGGAAAGTACCGCGCGAGGCTATAACC 47722 29 96.6 32 ............................C CGTCGCGGGCACCTACGACTTCGCAGGTGTCG 47661 29 100.0 32 ............................. ATCTCCGCTACAAGCTCATTGAGTTTCACGAG 47600 29 100.0 32 ............................. GGATACCGCCGCTTCGAGCGATCATGCGCCAA 47539 29 96.6 32 ............................C CCCACTCTCACCCTTGACCAAATCCGTGAGCT 47478 29 96.6 0 ............................C | ========== ====== ====== ====== ============================= ================================ ================== 7 29 98.5 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCG # Left flank : CTCCCCGCGTGAGCGGGGATGAGCCCGGCTAAGGACGCGGATTACCTTGAGCGCACACGTGCTCCCCGCGTGAGCGGGGATGAGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGCTCCCCGCGTGAGCGGGGATGAGCCCGTACCGGGTTGAACCGCCAGCAAGGCCCAGTAGTGCTCCCCGCGTGAGCGGGGATGAGCCTCCGGGTGAGCACATGACGCAGGGGGTGGGGTTGTGCTCCCCGCGTGAGCGGGGATGAGCCGTCGCCACCCGTATCTATACGCATATATCCACCGTGCTCCCCGCGTGAGCGGGGATGAGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : GTGGCGAGGACGATAGCGAGCATGAGGACGAAGTGCTCCCCGCGTGAGCGGGGATGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTGCTCCCCGCGTGAGCGGGGATGAGCCCCATGCCCCGGACGGTCGCCCGTGAGCTGCGGCGTGCTCCCCGCGTGAGCGGGGATGAGCCCACTGTTAGCTGCTCGAACGTGAGGTAGTTGTGGTGCTCCCCGCGTGAGCGGGGATGAGCCCCGCTCAACTTATCGGCGTCTCAAAATCAGCGCGTGCTCCCCGCGTGAGCGGGGATGAGCCCGTAGCCGGATCGCCCTCAGCGGAACGCTCACTGTGCTCCCCGCGTGAGCGGGGATGAGCCTGCGCCCACCGGCTGCTTCCACTCCGGGACCGCGTGCTCCCCGCGTGAGCGGGGATGAGCCCCTTGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [33.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 48470-48258 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV818665.1 Corynebacterium sp. HMSC065A05 Scaffold190, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 48469 29 100.0 32 ............................. TGACGATGGATACCGACCCGGCGGTCGCGACG 48408 29 96.6 32 ............................C GTCGTGCCCTTGTTTTTCCCGTCAAGTCGGCA 48347 29 96.6 32 ............................C GGCTAAGGACGCGGATTACCTTGAGCGCACAC 48286 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCG # Left flank : AGTGCTCCCCGCGTGAGCGGGGATGAGCCGGTCGAGCTGGGAGAAGTCGAGTACGGTCTCGAGTGCTCCCCGCGTGAGCGGGGATGAGCCTTCCCATCGTGAGAACAGCACCAAACATGACTAGTGCTCCCCGCGTGAGCGGGGATGAGCCTCTCAGTGAGACGTGAGACTTCAGTAAGTGCACGTGCTCCCCGCGTGAGCGGGGATGAGCCCTGGAGGTTTAATCATGGGTTACTTTGAACCGTGTGCTCCCCGCGTGAGCGGGGATGAGCCCTACATGGCGCTTGTTACGTGGTCGGCGATGTTGTGCTCCCCGCGTGAGCGGGGATGAGCCCTGGGAGCGACGGCTAGGCGAGTTGTCTAACCGGTGCTCCCCGCGTGAGCGGGGATGAGCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAC # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGCTCCCCGCGTGAGCGGGGATGAGCCCGTACCGGGTTGAACCGCCAGCAAGGCCCAGTAGTGCTCCCCGCGTGAGCGGGGATGAGCCTCCGGGTGAGCACATGACGCAGGGGGTGGGGTTGTGCTCCCCGCGTGAGCGGGGATGAGCCGTCGCCACCCGTATCTATACGCATATATCCACCGTGCTCCCCGCGTGAGCGGGGATGAGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTCCCCGCGTGAGCGGGGATGAGCCGGCGTTATACGGTGCTAGGGGTAAGTGAGCTTAGTGCTCCCCGCGTGAGCGGGGATGAG # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-1.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 49213-48635 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV818665.1 Corynebacterium sp. HMSC065A05 Scaffold190, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 49212 29 100.0 32 ............................. GCGATTTCATGCCTAGGCCATACCGCCGCGCG 49151 29 100.0 32 ............................. AAGCTGCTTCGCGAGAACACCGCAGACTGGGT 49090 29 100.0 32 ............................. ATGCGCTGCCACGTCACGTCGTTGATGTAGAA 49029 29 100.0 32 ............................. AAAGCCGCCGACGCCGCGAACTCATTAGCGAA 48968 29 100.0 32 ............................. GTCGAGCTGGGAGAAGTCGAGTACGGTCTCGA 48907 29 96.6 32 ............................T TCCCATCGTGAGAACAGCACCAAACATGACTA 48846 29 96.6 32 ............................T CTCAGTGAGACGTGAGACTTCAGTAAGTGCAC 48785 29 96.6 32 ............................C TGGAGGTTTAATCATGGGTTACTTTGAACCGT 48724 29 96.6 32 ............................C TACATGGCGCTTGTTACGTGGTCGGCGATGTT 48663 29 96.6 0 ............................C | ========== ====== ====== ====== ============================= ================================ ================== 10 29 98.3 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCG # Left flank : GTGCTCCCCGCGTGAGCGGGGATGAGCCTACACCGTGCGGGGTGGCAATGAGCCAGATCGAGTGCTCCCCGCGTGAGCGGGGATGAGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCCCCGCGTGAGCGGGGATGAGCCCATCGGTGCTCGATCAGGCCCGCGACATGCACGGTGCTCCCCGCGTGAGCGGGGATGAGCCCTAATCCCCAACAGTTGCGTAATTACGGCAATGGTGCTCCCCGCGTGAGCGGGGATGAGCCCATCGTGTGAGCTAGCAGGCTCACCTTGGGTTCGTGCTCCCCGCGTGAGCGGGGATGAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : TGGGAGCGACGGCTAGGCGAGTTGTCTAACCGGTGCTCCCCGCGTGAGCGGGGATGAGCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGTGCTCCCCGCGTGAGCGGGGATGAGCCGTGACGATGGATACCGACCCGGCGGTCGCGACGGTGCTCCCCGCGTGAGCGGGGATGAGCCCGTCGTGCCCTTGTTTTTCCCGTCAAGTCGGCAGTGCTCCCCGCGTGAGCGGGGATGAGCCCGGCTAAGGACGCGGATTACCTTGAGCGCACACGTGCTCCCCGCGTGAGCGGGGATGAGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGCTCCCCGCGTGAGCGGGGA # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [31.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 49524-49312 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV818665.1 Corynebacterium sp. HMSC065A05 Scaffold190, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 49523 29 96.6 32 N............................ ATCGGTGCTCGATCAGGCCCGCGACATGCACG 49462 29 100.0 32 ............................. TAATCCCCAACAGTTGCGTAATTACGGCAATG 49401 29 100.0 32 ............................. ATCGTGTGAGCTAGCAGGCTCACCTTGGGTTC 49340 29 96.6 0 ............................N | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : TCGAAGGTGCTCCCCGCGTGAGCGGGGATGAGCCCCGCTCCGGTGTGGCCCTCGACCTGCGCCCCACGTGCTCCCCGCGTGAGCGGGGATGAGCCGGAGCTTGTCTTCGGGAACTTCCTTGATGTGGGGTGCTCCCCGCGTGAGCGGGGATGAGCCCAGAAGAGGAGGGGCTTTTCATGAGCCTGTCTAGTGCTCCCCGCGTGAGCGGGGATGAGCCGTCTGCGATGCCGGTTGAAACGTCTCCGAGTTCGTGCTCCCCGCGTGAGCGGGGATGAGCCCCACGGGCGGCACGGGCTCCCCCGCGCGGATCGGTGCTCCCCGCGTGAGCGGGGATGAGCCTACACCGTGCGGGGTGGCAATGAGCCAGATCGAGTGCTCCCCGCGTGAGCGGGGATGAGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTCCCCGCGTGAGCGGGGATGAGCCGGCGATTTCATGCCTAGGCCATACCGCCGCGCGGTGCTCCCCGCGTGAGCGGGGATGAGCCGAAGCTGCTTCGCGAGAACACCGCAGACTGGGTGTGCTCCCCGCGTGAGCGGGGATGAGCCGATGCGCTGCCACGTCACGTCGTTGATGTAGAAGTGCTCCCCGCGTGAGCGGGGATGAGCCGAAAGCCGCCGACGCCGCGAACTCATTAGCGAAGTGCTCCCCGCGTGAGCGGGGATGAGCCGGTCGAGCTGGGAGAAGTCGAGTACGGTCTCGAGTGCTCCCCGCGTGAGCGGGGATGAGCCTTCCCATCGTGAGAACAGCACCAAACATGACTAGTGCTCCCCGCGTGAGCGGGGATGAGCCTCTCAGT # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.90,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 51310-50915 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV818665.1 Corynebacterium sp. HMSC065A05 Scaffold190, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 51309 29 100.0 32 ............................. TCGCCGCGATAATAACCCGGCCTAGAGGTTCG 51248 29 100.0 32 ............................. GGAACCAGAACCGGAATAGTCCGGCACGAGCA 51187 29 100.0 32 ............................. TGCCGTTAATATTTGCGATCCATGTGGACTCA 51126 29 96.6 32 ............................G ATACCGTGAGCCGTGAGTATCAAGGGGAGCCA 51065 29 100.0 32 ............................. AACCGGTTTATTGAATCGTCAAAGAAACTACC 51004 29 100.0 32 ............................. AGGGGTGAGCAGCAATAGTTAAGTTCCGTATC 50943 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 7 29 99.5 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : GATGCTGACCTCTTCTTATGGAGCGAGCTCGAAACAGTTGCAGCAGGAGTGAATTGGGATTCGAAAGAGGCTAGCTGGGCATGATGGTATTGGTCATTACCGCCTGTCCTGCTGGCTTGCGCGGCGACTTAACGAAATGGGTTATGGAAATTTCCCCTGGAGTTTTTGTTGGTCAGCCAACGGCGAGAATTCGTGATATCTTATGGGATCGCACTGTTGAATTGTGTAAAGACGGTCGAGCTTTGCTTGTTTATTCGACGGACAGTGAACAGGGAATGGAGTTTAAAACTCATCGGCATGATTGGGTGCCGACAGATTTTGATGGCTTGTCTTTGATGATTCGTCCTGCGTCCGCGGGAAAACGAGATCGCTTTGGAAACGGTAGACGTAGTGAGTGGGCTAAAGCTCGTTTTAAGAAGCAACGCCGCTGAGGTGGAAGCTTCTCGACGGAGTTGGATCTAGAATAGGCCGTGCACTGCTGTTGTTGCTGGTTGCGAAGA # Right flank : GTGCCCGGCCCGGATGGTGTGAAGGTTGACGAGTGCTCCCCGCGTGAGCGGGGATGAGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCACGTGCTCCCCGCGTGAGCGGGGATGAGCCGACGCACTCCACTACCTAGACGAAATCAGTAAGGTGCTCCCCGCGTGAGCGGGGATGAGCCGCGGGAAATCCAGCAAGCCGTGCATCTGCTCGCGTGCTCCCCGCGTGAGCGGGGATGAGCCCGCCAGGGCAAGCGGGCGGAGGTCTTGAGTAGGGTGCTCCCCGCGTGAGCGGGGATGAGCCGTTTGTGCAGGTGCAGGAGGGAACGGCCCCCGAGTGCTCCCCGCGTGAGCGGGGATGAGCCCTTATAAGACACCGCGTGAGCTTGCGCAAATTGGTGCTCCCCGCGTGAGCGGGGATGAGCCGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //