Array 1 4039971-4039407 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB900609.1 Methylobacterium sp. WSM2598 MET2598DRAFT_scaffold1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ============================================ ================== 4039970 31 100.0 34 ............................... CGGGTTTTTGCCCCCAACCACCCCGACCTGTCGA 4039905 31 100.0 44 ............................... GTGAGCCGGCGCGGGAAGTAGAGGAGGCGGCCGACCGTCCCGAC 4039830 31 100.0 36 ............................... GCTTGGCGGTAAGCGCGCCGGGCCTGCTCCTCGCAG 4039763 31 100.0 32 ............................... CTCGGCATCGGGGAGGCGCGCGTCGTGCTCGG 4039700 31 100.0 35 ............................... AAGAACGCCACAACGATCGAGGAGGCGAACCGCGC 4039634 31 100.0 35 ............................... ATATGAACAACGGTTGGGCACTCAACAATGTCGAC 4039568 31 100.0 35 ............................... AAGGCGACCGTGCCCGCGATCATCGAGGTGCGGTG 4039502 31 100.0 34 ............................... GCCGTCGGCGCCTGGTCGCTGCCCGGCGACACGC 4039437 31 96.8 0 ..............................A | ========== ====== ====== ====== =============================== ============================================ ================== 9 31 99.6 36 ATCGCCCCCTCGCGGGGGCGCGGATTGAAAC # Left flank : CGGGCGCGGGCCGAAGGGGGAATGACGCGTGCTGATGCTCGTCACCGACGACGTGAACACCCAGACGCCGGCCGGGCGCACCCGGCTGCGCCGCGTCGCCCGTGCCTGTCTCGACATGGGGCAGCGTGTGCAGAACTCGGACTTCGCGTGCGAGGTCGACCCGGCCCAATGGACGGCCCTGCGCGACCGCCTCGTCGGACTGATCGACCCGCAGCGCGATTCCCTGCGCTTCTACCGCCTCGGTGCCGAGGGGCGACGGCGCATCGAGCATGTCGGCGCCAAGCCCATCCTGGATCTCGACGGGCCGCTCGTCTTCTGAGGCGCGCGAACCGCAAGCGCCCAGGCGTCTCCCGGACGGTTCGCGCAGGACGTAACGCGCTGACCAACCAAGCCAATCAGGATCGTGCCCTCCACCCCGCGGGCCGCCGCACGCCGCTGTCCGGCCGGTTCGCGCGGACGGCCGGAATTGCGCTGATCCGGCCGTTGGTTAGAGTGGCGCC # Right flank : AACGGGCGCGCCCCGCGTCACCGGGCGCACGCCCATTCCCCCTGGCGGGGCGCCAATGGACACGCTGCGGGAGGGGGGATCATCCGGGGCGCGCATCACCGTCGCCCCGCCGCAGCCTCCGCCCTCAGCCCGGGCGATCCCCGTCCGGCCCCATCGCCCGCGCGATCCAGGCGACGAGGCAGCGCAGGTCCGCCCGCGCCTGCAGGTGCTCGGCGATCCACAGCTCCAGCCGATGGGGGCCGGGCGTGAAGCCGAAGGGCGCCGCGAGGTGGCCGGCCCGGATCTCGCTCTCGACCAGGAGGCGGGGCGCCAGCGCCAGGCCCAGGCCGCAGGCCGCCGCCTGAATCACCAGGTAGAAGTGGCCGTAGCTCTCCTGCGGCACGATGCCGAGATCCGGCCGGCCGATCGCCCGCCCCCACTCGGCCCAGGCCTGCGGCCGCGTCGCCGTCGCCAGGATCCGCGCCCGCGCCAGGTCGTCGGGCCCCGCGAGCCCGAGCCGC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCCCCCTCGCGGGGGCGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCCTCGCGGGGGCGCGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.30,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [21.7-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 7276745-7278593 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB900609.1 Methylobacterium sp. WSM2598 MET2598DRAFT_scaffold1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 7276745 32 96.9 35 .......T........................ GTCTCCGGCCGCCGTGCGCACGGCCTCGACCGGCC 7276812 32 96.9 36 .......T........................ ACCTACACGCACCACAACGTGGCGCAGAACGCGGAG 7276880 32 96.9 36 .......T........................ TCCACGTAGAGGAACATCTTGCCGCCGCTGGAGGGC 7276948 32 96.9 35 .......T........................ AACGGTGGGCGCTTCGCGGACGTCCAGCTCCGCTG 7277015 32 96.9 34 .......T........................ CTACTGCCTACTCCGTCAGACGCTTGCTGACATG 7277081 32 96.9 35 .......T........................ CTGCCCGAGGGCGAGCGCTGGAGCGCCTCGGGTCC 7277148 32 96.9 36 .......T........................ GTCGACGAGCTCACCGACATCAGCCGGCCCGAGGAG 7277216 32 96.9 35 .......T........................ AAGAACGTCGTCGTGCGCTACGGCGAGAGCCCGAT 7277283 32 96.9 35 .......T........................ CCGAACTCGAACGGCCTGATGACGCGCACGGACGG 7277350 32 96.9 35 .......T........................ GCGAGCAGGCGGTCGGCATTGATCGAGTTCGCCTA 7277417 32 96.9 35 .......T........................ GCCGACACCGCGTGGCGCGCGACGGGCGCGGGCGG 7277484 32 100.0 34 ................................ AACACGCACATGGCGTCGCTGCTGCTGCTGCAGG C [7277489] 7277551 32 100.0 35 ................................ CTCGGTCAGGGCGCGCCAGCCGGGCGGCAGGGCGC T [7277561] 7277619 32 100.0 33 ................................ TGGAGCACAAGACCGAGACCGTGCACCGCAGTG C [7277624] 7277685 32 96.9 36 .......................A........ ATGAACATCATCAAGTACACCGAGCGGCTCGGCCCG C [7277690] 7277754 32 100.0 34 ................................ AGGTTGGCGGTGTCCCGGGAGAGCCCGGCCCCGT CC [7277759] 7277822 32 100.0 35 ................................ TCCACCGCGGCCACCACGTAGACGAGCGGCGGGCG C [7277827] 7277890 32 100.0 35 ................................ GTGATCGATGAGCTGAAAGAGCACTGCTACCGGGG C [7277895] 7277958 32 96.9 35 ...............A................ TTGAGGAAGAGCAGCGCGCCGCCCTGGCCGTCCTG 7278025 32 100.0 36 ................................ CCTAACGAGATGGGTGCGGGCACCGTCACCGTCCGG 7278093 32 100.0 34 ................................ TTCGCGATCGGCGTCGACACCGCGAAGGACGCGA 7278159 32 100.0 34 ................................ TCCTGCGACGCGTGCTGGCCGAGGGGCCATCCCC 7278225 32 100.0 35 ................................ CTGGTCGAGGCGGATCTGTTCGGGGACCCGACCGC 7278292 32 100.0 35 ................................ GAGTTCGCCGAGCCAGATTGCAAGACGCTGCCGAG 7278359 32 100.0 36 ................................ GGCTCTGACGGCTGCAATCGCGAGTTGACGACCGGG 7278427 32 100.0 35 ................................ TCCGGCGCGCGCGGCACCCCGACATCACGGCTCAG 7278494 32 100.0 35 ................................ TGTCAGGCTCTAAAGGACGGCAAGGCCGGCGCCGA G [7278508] 7278562 32 90.6 0 ............C...A...C........... | ========== ====== ====== ====== ================================ ==================================== ================== 28 32 98.2 35 GTTCACCCCCTCACGGGGGTGCGGATTGAAAC # Left flank : TGGATCGGCCGGTCGCCGGTGACGTTGGGGCGCAGCTCCGTCCAGGCCGCCTCGGCCCTGGCGTCCTCCTGGGCGGCGGGCTGGGCCGCGACGGCCGTCGCCGCCAGGACCGACAGGGCCGCGCCGGCGAGCGCCGGTCTCCAGAACGCACGGATCATCGGGTGCTCCTCATCGTCTCCCCCGCGGCGGCGCGCCCGCGCTTTGCTGTTTGCCGATCAATGTAGTGACGGATCAGGTCTCGTGCCATGCCCCCGTGCCACGCCCCGCTTCGGGCGAGCCATCGCGGTCCGGGGCGGTGGCCTGACTCACGGTCGGGCCGCGGCGCGCGAACCCCGAGCGCCCAGCCCTGCCGGCACAGGTTCGCGCGGGCGCAACCTTTTGAACGAGCTGATGATTTGGAAGGTATGCGGCAAGGCGCCGCATGCGGGCGGGCGCGGATGAGCGGGGTTCGCGCACGCGCCGTCGTTTTGCCCGCCGGGGCCGGGGGTTATCGTGGCGGG # Right flank : CCACGCCCCGATCCGGCATAACCGCGACACGCTCCCCTCCCCCGCCGCCGAGGTGCCCGTGACCGCGTCGCCTTCCGCCCTCGCCGCCCTGCTGCCGGATCTCGGCCGGCGCACCCTCGTGATGGGCATCCTCAACGTCACGCCGGATTCCTTCTCGGACGGCGGGCGGTTCCAGGCCCGCGAGGCCGCCGAGCGCCAGGCCGCCAGCCTCGTCCAGGAGGGCGCCGCCATCCTCGACATCGGCGGCGAATCGACCCGGCCCGGCCACGTCCCGGTCTCGGCCGAGGAGGAGCAGGCCAGGATCCTCCCGGTGCTCGCCGCCGTCGCGCCCGCCTGCCCGGTGCCGATCTCCATCGACACCTACAAGGCCTCCACCGCCGAGGTCGCCCTCAAGGCCGGCGCCCGCATCGTCAACGACGTCTGGGGCCTCCAGCGCGAGCCCGACATCGCCCGCGTCGCCGCCGCCCACGGCGCCCCGGTGATCGTGATGCACAACCGCG # Questionable array : NO Score: 8.94 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.77, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCCCCTCACGGGGGTGCGGATTGAAAC # Alternate repeat : GTTCACCTCCTCACGGGGGTGCGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.70,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [23.3-23.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //