Array 1 130844-132328 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACLQQ010000002.1 Streptococcus salivarius strain 11.1 SB3748_S38_contig_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 130844 36 100.0 30 .................................... CGGTCATAATGTCTATGAACAATTCGACAG 130910 36 100.0 30 .................................... CACCATTTCCGTCAATATTTTGCTCGATAG 130976 36 100.0 30 .................................... CATTATTCATCCGTTACCTCCAAACAGCAT 131042 36 100.0 30 .................................... GCTAAAATGAGCGAGGAAGAACTTCAAGAG 131108 36 100.0 30 .................................... TGGTCCTGAGCGTTGTCCTATTTGTGGGAA 131174 36 100.0 30 .................................... AAGCAGAAGGGCGCTTAAATCTATACGATG 131240 36 100.0 30 .................................... CGCCCTCGTTAGCGGGCCTTGCACTACCAG 131306 36 100.0 30 .................................... AGCTCTTGCTTGAATATCAAGGGGCGTACA 131372 36 100.0 30 .................................... GCGAGTCAACAGACTGTCGGATACTTTGTT 131438 36 100.0 29 .................................... TTGGTGACATTTATCCAGCGGCCCTTTGG 131503 36 100.0 30 .................................... TGGTAGAGACTTATCCTGTAACTGTTGCTT 131569 36 100.0 30 .................................... TAGGCTTAACACCAAGGTTAGCCAAACGGC 131635 36 100.0 30 .................................... TCTACACAGCTGATAATGCTGGCAATGTGA 131701 36 100.0 30 .................................... TCCACTTGAGAATTGGCGACATCAATCAAT 131767 36 100.0 30 .................................... GCAATGCACTCACTTCCTAGAGACAGAACC 131833 36 100.0 30 .................................... ACACTGCCAAACTTGCAGAAGTTGAGGAGT 131899 36 100.0 30 .................................... TTACTGAAGCTACAGTTAAAGTAGGTACTA 131965 36 97.2 29 ...............T.................... TTTATCATTTCATCTGTCAAGTCTGTTCT 132030 36 100.0 30 .................................... CTACTTCTGTAGTTGTTGCTGGCGCTGATT 132096 36 100.0 30 .................................... GGTATTTTTTTTAAACAAACCGTTCCCGAA 132162 36 100.0 29 .................................... CAAGAGCTTATCTTAGAGAATACACCTGA 132227 36 100.0 30 .................................... TTAAGCAGTCAAATAGTCAAAAAGGTACCC 132293 36 94.4 0 ..................................GT | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 99.6 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : TTGATAGCTTTATTTCAGAGGAATTTTATGATAGTTTTTATAAGGAGATTGGTCAGCTAGTCAAAAAGTATCCAAACCTAACCTTTATTTTGTTTCCAAGTGATCAAGGCTATTTAAAGATTGATGAAGAAAATAGCAAGTTCGTCAATATTTTATCTGACCAGGCTGAGCATTTGTACGATGTTGAGTTTATGTATGAAAGGGTAAAGAAACATTATCCAAGTAATAATTTTCCAACGAGAGAGGATTTTAGGATGTCATTAGAGACCGTAACGCCTTATTTATTGACAAAAATGCTGAGACAACCTAGTCTCTCACTTATTGATTCAGTAATTTTGAATATACTAAATCATTTGTTTCACTTTAATTACCGTATAAGATATTCAAAAACTCCTGATGAGGAGCTATTGCATAGATATTTAGAAAGTAAGAATTGACAAGTACAGTGATTGATTCTATAATCACTATGTGGGTATAAAAACGTCAAAATTTCATTTGAG # Right flank : TTTGATTCAACTTAAAAAGCCAGTTCAATTGAACTTGGCTTTTTAAAATACGCGATAAACATAAGGGTTGTCAGGCTGACCGACCTCTTTGACCTCAGTCAAATTGAGGATAGGCAGGCTCTGTTTGAGATTTTGATAGTAATCCACAGTGATGGTACCAGTGACTTTTACCCAGGTATTATCCTTGAAGGTTTGGTCACTTCCTCTCGTCGCCAGTCCGTAAACACCTGAATCGGCGATACAGTGGATAATACCGAAACGGAAGATGAACTGATAACCCTTGGTCTGTGGGTCATTGTAAACAAAGCCGGTATAGGTGACCTTCTTGCCCACAAAATCGTTAGGATAGAGGTAGATGAGCTCCATAACTTCCATGTAATTTTCCGTGGTAATCTGGATGGTCTCATGTCCCTTGTACTTGGTTAGCTCCTTGGTCATCTCCTTCTCATAAGCTGAGGAGGTGAAGTAGGAGCTGGTGTCCGGCTTCAAGTACTGGATGG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //