Array 1 1467-1871 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QUJE01000031.1 Ruminococcus sp. AM29-26 AM29-26.Scaf31, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	=====================================	======================================	==================
      1467	    37	 100.0	    35	.....................................	CATCAATCAATGATTTGATAAACAGTTTATAATCT   	
      1539	    37	 100.0	    38	.....................................	ACTTCCGGCTCTATGTCATATTTGATTTCCGTAACAAT	
      1614	    37	 100.0	    36	.....................................	ACCGACATATTTACACAGAACTTCAAAGTTCTCTGA  	
      1687	    37	 100.0	    38	.....................................	GAGCCATTCTACTGTTTTTCTGTCTGGATACGTTTTTT	
      1762	    37	 100.0	    36	.....................................	ATTGTTACGACGGCTTCTCTCATGTCTTTAAAATTT  	
      1835	    37	  97.3	     0	.........G...........................	|                                     	
==========	======	======	======	=====================================	======================================	==================
         6	    37	  99.5	    37	GTAGAAATGAAAGTAAGCCCGTTGAGGGCATTGACAC	                                      	       

# Left flank :   GTCAACTGGAGAGAGCCTATACTTTGGCTTCCAGCTCTTTCCGTTCTCCCTGGCATTTGTACAATCTGTATGCATAACTGGAGAAAGCAGCATAAGAAAAGAAGAGATCCTGTCAGCGGTTGTAAAAAATGGGCGGTCATATGAGGAGATCATGAACTTTTTGAATGCAGAATCAGATGAAGAAAAGACGGAAAAATAGAATTATTTTGAGTCGCAGATATAGCGACACTCGATTTAGGCGGAAAAAAACTGGAAGTTCACAATTCTTGTTACTTCAGTGGTAAAGGAGAAGGAAAAACCAGAAACATTTATCTGAAAATTATAGTGCGAGTTTATTGACAAAAGAGCTATGAGGGCATATGATAATAATATATGAGCTGATAGACTTTTGGACGAGCACAAAAAAAGCAGTAAAAACAGTAATTTACAGAAAATTCTGTTAATTACTTGCAAAAATAGCTCTCGGAAGCCGCTAAAATCAAGGGTTCCGAGAGGCTACC
# Right flank :  CTTTTCTTAGACAGTTTCATAGTAACGGCTTTTGCAAAACATATCGGGTCGAGTAGACGCACCCCTTGCGGTCGTACGCCCCTCGCAGAATCCGGACTTGCGGCTTTGCCGCATACGGCTCTTTGCGAAACGAATCGTTCATATTTATCAATCGTATACACTGACATATATTCTTGCTCTTACTAACGGGTAACTGTTATCAATCATATTCAGAAACTTTACCCAGTTGTAGCTTTTCATAACATTATAACGAAATGCTGTGATTCTCTCTGAATTGTCAGTGATGCCATAGTAATGGAAATAACCAGTCAGTATCTCATTAAGCTTGGAAATGATTTCTTTTACTCTTAAAGTCCGCATGGCCCAGGACACCGGATGAAGTAAGGAAAATCTCTTTCCAGCAGGTGTAATGGCTCCTCCAGGGACTGGAAATCGAACAGAAAAAAGCCCATCATCAGGTAAAGATAGACTATGAAAACAGCTGTTTCTGATCTTCCGTG

# Questionable array : NO	 Score: 3.23
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTAGAAATGAAAGTAAGCCCGTTGAGGGCATTGACAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:54.05%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-8.10,-6.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0   Confidence: HIGH] 

# Array family : NA
//