Array 1 671617-672997 **** Predicted by CRISPRDetect 2.4 *** >NZ_PDJF01000001.1 Corynebacterium renale strain DSM 20688 Ga0074724_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================================================================================================== ================== 671617 29 72.4 122 C.CA....G..T.CT..C........... TTGTTAAGTTGGGGCAATTATTTTTCCCTGCACCTGCAGGGACGGACGTAAGCCCCTATTTTCATTCGATCAAGTCGTATGTAAAATAGGCAATCGGCTGATAAAACTCCTGTTCAAGGAGT 671768 29 100.0 32 ............................. GAAATGGGCGGCAGAATATCGTTCAGGGCTTG 671829 29 96.6 32 ............................T CCCACGGCACGGCCAGGTGCTCAGCATTGACA 671890 29 96.6 32 ............................G TGTAAATCGAGGAGTAGGAAAGAAACACCCGA 671951 29 100.0 32 ............................. CAGGAAAAACGGCACCTTCACCGACACCATCA 672012 29 100.0 32 ............................. CCCGAAAGGACACACCATGAACCTCACATTCC 672073 29 100.0 32 ............................. GCGGTCGCAATCGGCCCCAGCTCCGTCGCAAA 672134 29 100.0 32 ............................. CGACCAGCAAGAACACACTCCTCCAACGACGC 672195 29 100.0 32 ............................. CGTGGCCAAACGTAGCGTGGGAGATCACTGAG 672256 29 100.0 32 ............................. TCTGCGCAGGTCAGGTAAATTTCAAATCATGA 672317 29 100.0 32 ............................. CGCCCGGCGCGTACGTCAGCATCCGAACCATC 672378 29 93.1 32 ............CA............... TCCACCCCACCGGCACCCCAGTCGAGGCACCA 672439 29 89.7 32 ............CA..............G TTGGCGCCGCGTTTGCCGGGCACGATCTCGAA 672500 29 89.7 32 ............CA..............G AAACTAAGCTCTTTTTCCGACCAACCACTGCT 672561 29 93.1 32 ............CA............... TTTACCGCGCGATTAACTCCATCATTCCACCT 672622 29 89.7 33 ............CA..............G TTTGCGGTTGGTCTGCGTGTGTCGTGGGAGATG 672684 29 93.1 32 ............CA............... CCTTTACGGCGTTGACAACGGCGTACTTTACT 672745 29 93.1 32 ............CA............... CGCGCACTGTCTGACATGAAGCTACGCGGGTG 672806 29 89.7 32 ............CA..............G GTTAAAAGGGAACCCCCGGCTGTGTATGAAGC 672867 29 86.2 73 ............CAT.............G GGGCGGGTCACTGTCCTAGAGGTCACACACGGGTGTTCCCCGCACCGTTCAGCAACCGCCATACAAGGGCCTA 672969 29 89.7 0 ............CAT.............. | ========== ====== ====== ====== ============================= ========================================================================================================================== ================== 21 29 93.9 39 GTGTTCCCCGCATGCGCGGGGATGAGCCC # Left flank : CCGCATTTACGATATGCGGATAAGTCATCTCAATCTGTGATTGGAAAGTCATGGTTGCTTTCCCGCAATCATGTACGCCAGCCAGCCATAGGTAAAGAGTGCGCAGTTCTTCGACTTCAATCCCCAGCTCTTTAGCCAACTGACGTTTCACGTTTGCCGCTAACCACACGTCAAACACCGCAGCAGCAGCGCAAGCTGCATCAACTAGATGCTGCGTTAATGAAAGATACCCAGATTCATCGCCTGACTTGGCCCACAAAGAATTGGCCATGGGGCTGCGCCGAGAAACCCACCCATCGAACAGGCGTGCCACATCAAGGACACTTTTCGGAAGTTCATGTCCGACACTCATGATTAGCTTTCTTTTAGATGTTTTCTTCGATGGTTTTGAATCTATCCTGAAAAGTAAAACATGTCAATACCCAATACCCAACTTAACAAGTTTTATTGTGTAAATCTGACGCTCTTAGAGCATTACGGAGCAGGGCTATAGAATGTGG # Right flank : CAACATTCACGCTGGCCACGGGGTTGCTGACTGGCGTTCCCCGCGCATGCAGGGATAGATAATTCTCCAGTTACTATGTCGGAACTCTGAACGCTTCTGATGTCTACAGTTTCACGCCCAGCTTCCGCACCACCACGAAATTAATCCCTGACACTCTCCCCCACCGCGGGCCATAATGGTCCCCATGACTCTTTATGATGACACCCTCGCCCTTTTGCAGCAGTTGATCCGCAACGCGTGCGTCAATGACCTCACCGCCGATTCTGGTCATGAGGTCCGTAACGCAGATACGTTGGAGGAGTTTTTCGCCGCGGAGATCGCGGCCGGTTCGGTGAAGGTGCAGCGTTTTGAGCCGCATCCGGGTCGTCGTTCGGTGGCGTTTACGGTGCCCGGCGCGGACGAAACCGCTGAACCGCTTACTCTTTTGGGACATATTGATGTGGTGCCCGTCGATAAGCCGAAGTGGACCACGGATCCTTTCGGGGCGGAGATTATTGATG # Questionable array : NO Score: 5.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:-0.51, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATGCGCGGGGATGAGCCC # Alternate repeat : GTGTTCCCCGCACACGCGGGGATGAGCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCATGCGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //