Array 1 286473-291328 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDUS01000003.1 Kocuria indica strain DE0433 NODE_3_length_379818_cov_49.837859, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 286473 28 100.0 33 ............................ CTATGCGGTGATAACAAACTATTCTGAGCCGGG 286534 28 100.0 33 ............................ CTCACGCGGCCACTCCCGCTTCGAACGGTCACC 286595 28 100.0 33 ............................ TCCAGGGTGTACCGGGGTTTCTTCGTCAACGCC 286656 28 100.0 33 ............................ GCGCAAGCCGAACCAGACGTTACAGGACGCGTG 286717 28 100.0 33 ............................ CTGCCCGAGGTCAAGGGTGACCGTGTCCCCTAG 286778 28 100.0 33 ............................ CTCGTCGCGGACCTCGAGCGCCGGCACGGGTCC 286839 28 100.0 33 ............................ TGATTATCAAACGTCAGGCAGCCGCCCATCCCC 286900 28 100.0 33 ............................ GTCCGCGAACTCTGCGTCCCTAGCAGTGCACAA 286961 28 100.0 33 ............................ CAGGCCAATCGAGTCGTTCATGGTGCCGTCAGG 287022 28 100.0 33 ............................ CGCGGCCAATGCCTCGGCACAGGACCCTGGGGG 287083 28 100.0 33 ............................ TGAGCCCGAGGCTCTTCGCGAAAGCCCCTGCGG 287144 28 100.0 33 ............................ GTACATGTGCAAACGGTCCAGGTCAGTCACAGT 287205 28 100.0 33 ............................ CTCGCCATTCGGCATGGACGTTTTAAGTGAAAC 287266 28 100.0 33 ............................ GAAACGCCCGACGTTGGCCGGCACCCGCTCGTG 287327 28 100.0 33 ............................ CGGTGGCCCGGTGATGTCGGTGCAGATCGACGG 287388 28 100.0 33 ............................ GTACACCCCCGGGTCAAGGTGCAGTTGCTCGCA 287449 28 100.0 33 ............................ CCGCACGCGCACGCACCACACGCGGCCGCGTTC 287510 28 100.0 33 ............................ CGTGTTGCCGATGACGTCGAGCTGAGCACGGTT 287571 28 100.0 34 ............................ ATTCCCATGGCTTCACGAGCGGCTTTCACTCCCG 287633 28 100.0 33 ............................ ATATCGGTCACGGTTACTTCCCTTCCAGGGTTT 287694 28 100.0 33 ............................ GCTGGCGCCCCCATGTAGACCGGCTCCTCGAAC 287755 28 100.0 33 ............................ TACGCCGATGAGGCCGCGGCATGACCGAGTACA 287816 28 100.0 33 ............................ GTATCGGTGGCGGGATCGTGACGGGGACACTTG 287877 28 100.0 34 ............................ GTCAGCGAACTCTGCGTCGCTGGCAGTGCACAAC 287939 28 100.0 33 ............................ GACGGCCGCCGAGTTGGTCCGGTGGCTGCGGTC 288000 28 100.0 33 ............................ GGAGGAATCCGATTGCGGGTTAGCTGCCACCCA 288061 28 100.0 33 ............................ CACGTGAGCTGGCGCGCCTTTGAAGTAGTCGGC 288122 28 100.0 33 ............................ CGCGTCGACGAGCTCTCGGCGGAGCTGGAGGAC 288183 28 100.0 33 ............................ TGAACGCGCTCACTCGGGAACCTGCTCAGGCGT 288244 28 100.0 33 ............................ CCTCTCAGCAGTCACGATCACCGTCTTGGGGTT 288305 28 100.0 33 ............................ ACCACCATTGCGGAAACCACCAGTCTTCATGTA 288366 28 100.0 33 ............................ CAGGGCCACGGACTCCTGGAGATCTGGGTTGTG 288427 28 100.0 33 ............................ CGCCGCGCACTCATCACTCGTCAACGCCGCCAT 288488 28 100.0 33 ............................ CGCGGCACCAACGGATTCGGGAGCACAGGACGA 288549 28 100.0 33 ............................ CCAACCCTCGTCGGTGTCGGCTTGGAACACGGC 288610 28 100.0 33 ............................ CCAGCCCGCGGCGAACCCTCCGACAACGGCCAC 288671 28 100.0 33 ............................ GAATCAGCCCGCCTTCGGCGCCGTGTCGTCCTA 288732 28 100.0 33 ............................ CCGTGGGGATATCGTGCGCAAGGGTCAGGTGAT 288793 28 100.0 34 ............................ ACGGTCGGATGGGGTCCACGCTATCGCTGCTCAT 288855 28 96.4 34 ...........A................ GAGGTTCCGGGTATGCGTGGCCAGGACCTCGCCC 288917 28 100.0 33 ............................ GCATGAGTGAGCAGTGGGTTTGTGAGCATTGTG 288978 28 100.0 34 ............................ GCTGACGGCGCATTCGTAGGTAATGCCACCCTGC 289040 28 100.0 33 ............................ GGTCACGTCGGTACACCCGCCACCGATGATCAC 289101 28 100.0 33 ............................ CTGGGCCGGGGAAATGCTCGCCCTCGTATGGCA 289162 28 100.0 33 ............................ CTGTCGTTGACCGTGCGTGCGGATTCGGTGAAG 289223 28 100.0 33 ............................ CAAGCTCCCTCGCCGCCGAATGTTGAACCTCCG 289284 28 100.0 33 ............................ GAAACCTTGATCCGAGCGCATCGCTGCGAGCAA 289345 28 100.0 33 ............................ CGATTCCGTGGGATTGTTCCAGCAGCAAGCCCG 289406 28 100.0 33 ............................ CAGTGCCCCGGCGTCCGTCGCCGTCTTCTCGTA 289467 28 100.0 33 ............................ GCCCACGATGGCCGGGACCCGGTCCTGGTTCAA 289528 28 100.0 33 ............................ GCAGCTCTCAGACCCCCACAAGGTGCGCCCCTA 289589 28 100.0 33 ............................ CTTCCAACACAAGTTGTTCATCGAACAGATGGG 289650 28 100.0 33 ............................ CGGACTGGCGGGACGGGGTGAGGACATGACCCT 289711 28 100.0 33 ............................ GAACGCGGCAGCTCATGCTTCATGGGGCTCGTT 289772 28 100.0 33 ............................ GAGTCGGATCAGCTGTCGAAGTTTGTGGAGGAG 289833 28 100.0 34 ............................ ACTGGCACGTTCACCGTCTGCGAGAACAAGCTCC 289895 28 100.0 33 ............................ TGCGGCCCCCTGTACCTCCGCGATTCGGTAGCC 289956 28 100.0 33 ............................ GGTGGCGTCGTATACGGCTGGCCCGTCGGACCA 290017 28 100.0 33 ............................ GTCTCACTGAGCTGGCGGAGAAGACAGGTCTCT 290078 28 100.0 33 ............................ CGTACCCGACTGGGCTTCAACCTTCAGGAACTG 290139 28 100.0 33 ............................ GGAGAACACCCTGGTCATCAGGCCGGGAGTGAC 290200 28 100.0 33 ............................ CCAGACCAGGCCCTGAAGGATGGTCATCACGAC 290261 28 100.0 33 ............................ CTCCACCACCTGGTCCGGGGCGTCCTCGGGGAC 290322 28 100.0 33 ............................ CCACACGAGCAGCGCACCAATGACGGTCGCGGC 290383 28 100.0 33 ............................ CTTCAACAAGATCGCGGACAAGATCGGCATCAA 290444 28 100.0 33 ............................ CATCGAGGTGGCCGAGGACCACTCCTACGTGCT 290505 28 100.0 33 ............................ GATCGTGTGGGCGAACCCGCGTCGGTCCTCGCT 290566 28 100.0 33 ............................ GTACATGCAGCTGGTCGAGGAGTCCATGCAGGC 290627 28 100.0 33 ............................ GCGCACCGCGAAACGTTCAACGCATGGCCCGTC 290688 28 100.0 33 ............................ CGGTGTCCACGAGCTTCCCGGTGTTGAGGTCCT 290749 28 100.0 33 ............................ GCCCGCCTGGCCTCCTGGGGTGACGTGTCGAAG 290810 28 100.0 33 ............................ CACGAAGGCCCTCCGCGATCGCCACCCCCATGT 290871 28 100.0 33 ............................ CGACCCCCTGACCCTGAACGGGGCCCGGCTGGG 290932 28 100.0 34 ............................ ACTTGGGGGTGCGGTTGTCGCTCATGGTTAGGTC 290994 28 100.0 33 ............................ GGACGAGGACGGTGGCCGGGAGCGGGACCATTC 291055 28 100.0 33 ............................ CTGGCGAACCAGTGGGGTCACCTGGGGGGCTTC 291116 28 100.0 33 ............................ CCACCAAGGCCGGCGACCCTCACAACCGAAAGG 291177 28 100.0 33 ............................ TGCGGGACAACCGGTCCGCCCACCCCTGCTTGC 291238 28 100.0 33 ............................ CCGGGGTGACGTACACGCCGGAGGCGATCGCCA 291299 27 92.9 0 .......................-...A | GG,T [291316,291326] ========== ====== ====== ====== ============================ ================================== ================== 80 28 99.9 33 GTGCTCCCCGCGCATGCGGGGATGAGCC # Left flank : CATCCTCTACGAGGACGCCATGTCCATCTGGTCGGGACGATCAGATTCGACGCTCGCCGCGGGACAGAACCATGAAAGGGGCCGAACATGATGGTTCTGGTTCTCTCTGCCTGTCCCGTGGGGCTCCGAGGCGATCTGACCAAGTGGCTGTACGAGGTATCGGCGGGTGTGTTCGTGGGAAAAGCCAGTTCCCGAATACGTGAACACCTGTGGGACAGGGTGCTCGAGACCTCGGGTTCAGGGCGGGCAATCCTCATCTGGAGCTCCAAGGGAGAACAGGGCTTGAAGTTCGAGGTCAAAGACCACCACTGGGACCCCGTGGACCTAGACGGCCTGACCCTGATGAAGCGGCGTTCCCGTGCACAGGAAACCCGGCCTCCGGAACTGAAGCGAGGGTGGAGCAAGGCGGGTGCGCAACGGCGTCTGGGGCGTCGGCGGTGAAAGCGCCGAAATCGATGTAAACCATCGTAGAGTGTCGATATAACCCCAGGTGAGCAAGT # Right flank : AAATCCCCCAACTACTTCCGGCCCGCACCCGGAAGGGGACAGCCAGACCCTGGGTCATAAGGAGTGTGGGCGCAGTGGGCTCCTTCGCGAACTCGTCGTAGAGGAACGCCTGCGTCATGTACCGCTCTTCGTCCTCGTAGTAGCGAGTACCCAGGCACAGGGGCGGGCCGTTACGTAGCCCGCGCAGTCGCGGCGGTTCTCTCAACCCTGCTGGGCGGGCTCTCACAGCACCTCGATCTCGGCGTGGGCCGCCACGTCCGACCTGGGCCCCACCCCGGGCGCCGAAGCGCCCCCGGACCTCGAGGCGCCGACACCGCACGAACCCCAGCGGCGACGTCGTACCCACCCCAGGCACGCAAACTATCCCGGAGACCCCGGCGCCAATCATCGCACCATCTCGCCAGACACAACTACCGCCCCACCGACCCCGGCTCGTCCCGCGGGACGGCGAGTGTCGCGGCGGCCATGAGTACGGCGGTACCCGCCGCCGCCACAAAGAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCATGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGTGCGGGGATGAGCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //