Array 1 427110-437526 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017768.1 Methanobacterium subterraneum strain A8p chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 427110 30 100.0 37 .............................. GGGGCCACTGAGTATGCAAGGAGCCTGGGTGTTACCA 427177 30 100.0 36 .............................. TCATAGAAGATTTGAATTATATTTGTCAGCCCTGAT 427243 30 100.0 36 .............................. CTGGCCACTTCGGAGTTTTATCGACCTTTAATATTG 427309 30 100.0 36 .............................. TATATCTGCCATTGATGATCTCCCCTGGCTCAAAGG 427375 30 100.0 36 .............................. TGTCCCCAAGACTGAAATATTTACCATCTAACCACC 427441 30 100.0 37 .............................. CACTGTGACAAATTACAGTCAGGCGGAAATGACAGAC 427508 30 100.0 36 .............................. CCCTTTGACACGATCAATTATATCCAGGTGCACCTT 427574 30 100.0 36 .............................. AATATTTTCACAGGACATTATGGAGAATATAATTAT 427640 30 100.0 37 .............................. GAAAATATGGAACAATACCTCTACAAATGCAGCTGCG 427707 30 100.0 36 .............................. TAATGTTTAATTTATGGGATGTTTTGAAGTCTTTGT 427773 30 100.0 36 .............................. GATGATGTGTGGGATCCGGATTGTACCTCGATCACT 427839 30 100.0 36 .............................. ACTACATACATACCATCCGTTTTCAAATTTAAGGTT 427905 30 100.0 36 .............................. TCTAACTTGTCTGCATCAAGACCACTGCCAGGGCCA 427971 30 100.0 36 .............................. TATAATATTCTCACAGAAAACCAGTATGATGTTGAA 428037 30 100.0 36 .............................. TTTCAGTAGTAGTATAGTAGTATAGTAGTAGAATAA 428103 30 100.0 37 .............................. TAACAAAAATCACCTTACACTAACTAAGACATTTAAA 428170 30 100.0 35 .............................. GTGGCTATTCACAAAGTGCAATGCATAGAGTGGAA 428235 30 100.0 36 .............................. GATGGTTTTCAGTGCCCTTGGATATAGTTTCAGTGA 428301 30 100.0 36 .............................. TTGCACTGGAAACCTTTTATTTCGGTGCGTATAATA 428367 30 100.0 37 .............................. CACAATTAAAAGGTATGATTCAGAAGAGGATTTTTGG 428434 30 100.0 37 .............................. ACTGTTGCAGAAAATGCAACTAGTGCAAATATTGCAC 428501 30 100.0 35 .............................. GTTGGGGCTGTTACATCTGTTTTAATTAGTGTTGC 428566 30 100.0 36 .............................. TTTATTGTGATATTTGCAGTTTTAACTGAAATTATG 428632 30 100.0 36 .............................. TCAACAACTGCCGGTTAGCAATGGAACTATGCCCCA 428698 30 100.0 35 .............................. AGATTAAGGAAATTGGATGATTAAAAAGTGGAGGG 428763 30 100.0 36 .............................. TGGAACCTTCAAATGTGGCGGTCACGTATGGGTAAC 428829 30 100.0 36 .............................. AATGGTACAAGTGAACTAATAAATGAAAGTCTTGTA 428895 30 100.0 36 .............................. TACCTCTTTAAATGTAGTTACTGTCTGAATTGCTGT 428961 30 100.0 36 .............................. TACAAACAACCACTCATAACAACATTAGTGTAATCT 429027 30 100.0 37 .............................. GTCACATACCTAGGACATTACCTTAAATGCAGATAAT 429094 30 100.0 36 .............................. TTTTCAGTTATCGTTAGGGGGCTAATAGGTTTCTAA 429160 30 100.0 36 .............................. CGCTGATGGTGATGACGACAGTGCAACCGTAGCAAT 429226 30 100.0 36 .............................. CTGAAAACAGTGTAATTCCCTATCATTAAGTTAAAG 429292 30 100.0 36 .............................. CTGTATAGGGGTAATGGAAAAAACGGAAGGATGATA 429358 30 100.0 36 .............................. TATCTCTGCTGCAACATGGCAACCACCACCGCTGAT 429424 30 100.0 37 .............................. TACTTCATCATACCCGCAGCATCAAATACTGTATTAT 429491 30 100.0 36 .............................. ATGGTTCAATGAAGTTTAATTTGAAAGCTGATTTTA 429557 30 100.0 37 .............................. ATCGTAGTAGAATAAATTTAATCAATTTTTAATGGAG 429624 30 100.0 35 .............................. TACACTGATGAATAGGGTGTGCTGACACGATAAGC 429689 30 100.0 37 .............................. TTCAATATCACCAATATATTATATTGTGTTGATGATA 429756 30 100.0 36 .............................. GGACTTTACCGGCTGCATCTACTGGGACAGTGGTTA 429822 30 100.0 36 .............................. ATGTATGGTGAAGAATTAGGATGGATGAAAATCACA 429888 30 100.0 35 .............................. ACGCTTAGCCATACTCATTCGCTTATGCCTCCTGC 429953 30 100.0 36 .............................. CTAAAAAAGATTAAAATTGTTGTTGTAATCAATAGC 430019 30 100.0 36 .............................. GGATAACCAGGCCCCCTTAACTTTTTGTATTTTGAT 430085 30 100.0 36 .............................. CATACATGCATACCTCGAAAACATAATCACAAACAA 430151 30 100.0 36 .............................. CCTCATTACTCTGATTGAAAAACTTCCCTTATCCTC 430217 30 100.0 37 .............................. TAATTTAATGCCTTACAACATTTTAACGGACAATCAA 430284 30 100.0 37 .............................. TGTTGAAACTAAGCCAGAACGAAATAGATTTTTGTGG 430351 30 100.0 36 .............................. ACTACAACCCCCTAACAGTAACAACTATTATTTATC 430417 30 100.0 35 .............................. TATACTGACATTAGTTACACGAGGATGGCAGGAGG 430482 30 100.0 35 .............................. TACAGAGGACCCTTATGTGACAGTGGAAATATGGG 430547 30 100.0 37 .............................. TCGTCATAACAAGCATAGAGGTTGTAATCCTTCCCTG 430614 30 100.0 36 .............................. AAATAAATACTTTGCTTATTGTTTTTAATTTATTCA 430680 30 100.0 36 .............................. GACCTGGCGAATGAACTATTAGAAGAATTACAAGAA 430746 30 100.0 37 .............................. CGTTCTACACGTTTTAAACTAAGTCCCCGTGGGGTTT 430813 30 100.0 35 .............................. ACTAGTAAAACAAACCCTCCAGCTAAGCCAACCAC 430878 30 100.0 35 .............................. TTCTTTCTTTTATTAAAATAATGGAAGGGGGTCGT 430943 30 100.0 37 .............................. GTGGGGTTAAACTAGCCTTTGGAGTAAGTGTTACATC 431010 30 100.0 37 .............................. ATGGTTACGCTCCAAAACTATACACCACTAGATATGG 431077 30 100.0 36 .............................. ATTAAACTCAATAAAAAAGAACACAATAGTACCAAA 431143 30 100.0 36 .............................. AACATTGCACCGGTCACTGCTTCCATCTGTGGGGAC 431209 30 100.0 36 .............................. CTTTCTCCAAGGGCAAATAGTCCTCCGGCGGTCCAG 431275 30 100.0 36 .............................. AAATCCTCATAGCATAATGATATTTCATTATCAATG 431341 30 100.0 37 .............................. ACTGTTTTTATATAATTTATTTTTCTTTGATTTTAAG 431408 30 100.0 36 .............................. GTTAGAAAATCCCGGAAACCTAAAAAGAAATAGGAG 431474 30 100.0 36 .............................. ATACTAAGGCCATCTTTGTCAATATTCATCAATGGT 431540 30 100.0 36 .............................. TTATTTATGATGTCATTGTTTGAAATCATCAACCGA 431606 30 100.0 37 .............................. GCCAGGATATAATAATCACTGCTAATAATTATTGGTC 431673 30 100.0 36 .............................. TGGAGAACCTGTCGAAGTACAGGAACAGTATGTTGA 431739 30 100.0 36 .............................. TTGCATTTTCCCACGCTGCAGCGGTGTTATGGGCGG 431805 30 100.0 36 .............................. CTAATATCACCTCAAAAAAGAGTTTAAATAAATAAT 431871 30 100.0 36 .............................. CCAGAATGGGCCTTCTTCTTCTTGTATTGTGGCCAT 431937 30 100.0 35 .............................. AACAATGCAAAATATGAAGGCGTGACATGGACGGT 432002 30 100.0 37 .............................. AGTGAAAGTTGGGACAGGATCAACACTAGCTCCGCCA 432069 30 100.0 36 .............................. GTTTATACATGGCCTCATAAGTATCCGCATCACCAT 432135 30 100.0 37 .............................. TGAGAAAGGCCGTGGCCCTATCTATCCAAAGCTCCGG 432202 30 100.0 35 .............................. TTTCTTCATCTTCCATCTCATTAGCAAAAAATGTC 432267 30 100.0 37 .............................. TACTTATACAAACTTCCTTTACTTCCAGGAAGATCAT 432334 30 100.0 36 .............................. GTACAAACCATGCAACCGTATAATTCATAAAAAAAC 432400 30 100.0 35 .............................. CTGTAGATGGGAACATACCCATCTAGGAGTATTGG 432465 30 100.0 36 .............................. AGTGCTATGAGTACGGTATCACCAGGCCACATGCTG 432531 30 100.0 35 .............................. AGTAATATTAGAAGAAAAGCTCCTTGCGAATTTGA 432596 30 100.0 36 .............................. GGGAGATGAAAACTAAATCTGAAACCATCAAGAAAG 432662 30 100.0 36 .............................. GATGTAGATCCATCTACAGTTTTTAATTTCGTGAGA 432728 30 100.0 37 .............................. TTCGTGGAACCAACCAGGCGGTCAATGAGGGTAATGT 432795 30 100.0 36 .............................. TATTTACAGGGAATACTATGTTTAGTTATTTCTTCT 432861 30 100.0 37 .............................. GAACATCAAAACTACCATCAAGCAGAGTTAGATACTT 432928 30 100.0 36 .............................. ACGTATATACTGACACCTATAATGACAGACCGAGGA 432994 30 100.0 36 .............................. AAACTAGAACTATTAACATCAGTTGGACTCAAACTA 433060 30 100.0 37 .............................. TGACTACCCCATAAGTATCATATAATGGTTTGTTAAA 433127 30 100.0 36 .............................. AGAATATTTTGGGGAAACTCAAGATATGGCATATTT 433193 30 100.0 38 .............................. AGAGGACGCTATTTCAAAATATTTATTAGCAGTACAAC 433261 30 100.0 36 .............................. ACATAATAATAACGTTGGGAGATAAAAGGAACAAGT 433327 30 100.0 36 .............................. TGGGGATAAACCCCAAACTCTTTTTGAGGTGAGAAA 433393 30 100.0 36 .............................. AAGAACAAGGCATGGAAGAACGATTTAAAGATGCTT 433459 30 100.0 36 .............................. TGATTGGCTCTACCAGTGATGGGTCTGCTAGTATTG 433525 30 100.0 36 .............................. AAAGAACTGTCAGCTTCTATGGCTGCAGCTAGACGG 433591 30 100.0 36 .............................. TTGGCTGATTTAAGCCCTGATGGGATGCGTAACTAT 433657 30 100.0 36 .............................. ACTTCAAGGGAGAAAATATTGTGACGACGAAGCAAA 433723 30 100.0 35 .............................. TACGTTTTTTCAACCGTTACACCATATTTTGAACT 433788 30 100.0 36 .............................. TTCGCTTATTATCTGATTATAATCTATGTAACTGAT 433854 30 100.0 36 .............................. TAAATATACATGGTGATTAAATGGGACAAATAAAAC 433920 30 100.0 36 .............................. TCTTAATCACCTCTTATTTTTCATCTTTAGGTCTGC 433986 30 100.0 37 .............................. TTTAGTGACAATATCATTTTGTAATAAGGCCATCCGG 434053 30 100.0 35 .............................. AATGATGATGATGCGGAACTTTTAAGTTTATCAAA 434118 30 100.0 36 .............................. GATGATAATCCAGTGGAAGAAGGTAAAGGAGTACCA 434184 30 100.0 36 .............................. TGATGTATTGGGCTTAATGCTTCAATGTTTCCTTTT 434250 30 100.0 37 .............................. GAAAACCTATAAGTCACGTTTGTTAAAAGTTATTCCC 434317 30 100.0 36 .............................. CTTTACTCACCTCTACACCTGCTAAGGTCCTAACAA 434383 30 100.0 36 .............................. GAAATACTAGGAATACTAAAAAAATAAAAAAGTGTT 434449 30 100.0 36 .............................. AACGTCATCTGGTTTTAAGACTTTTGCTTTATCGGT 434515 30 100.0 36 .............................. TATACAACATACCCTGTATCTGGATCGGTTACGGTT 434581 30 100.0 37 .............................. CCCATAAACCATGTTATGAGGTTAATGCGGCCTTCAA 434648 30 100.0 36 .............................. TACCTTACACAGATCTATGAAAACGATGGGGACAAT 434714 30 100.0 37 .............................. GTCATGAAGGTCTGATAGGTTAATCCGAGTAGGAATA 434781 30 100.0 37 .............................. CACATGGTCCTCATAGTAAATCTGGTAAGATATTGCG 434848 30 100.0 37 .............................. TTGATGGAACTGGTAGGCCATGCTATGTATTATATGG 434915 30 100.0 36 .............................. TTCTTTGTTTGCAGTTGGTGATTTACATCCTACTTT 434981 30 100.0 36 .............................. AAAAGCAAACGTAAAGTAGACTTCTCATTTAAAGCA 435047 30 100.0 36 .............................. ACTACATGAGATTAGTAAAGATAAAGAAGAAGAGGC 435113 30 100.0 36 .............................. TTCGTTATCCTTGGAACCGGTGAACATTGGATAGGT 435179 30 100.0 36 .............................. ACTCAATCCTTGTTTTCGTAATTGATAGGCAACACC 435245 30 100.0 37 .............................. GAACTTGATGATATTAAGTTGGCAATCACCAGGAGCA 435312 30 100.0 36 .............................. CTCGGATCAAGATCTTCAACTTTTCAAAAAATGATC 435378 30 100.0 36 .............................. TCATGAATGTTATGTTACTTTAGTAAGAAAGTGGAA 435444 30 100.0 36 .............................. TTCATGAGTTGACCTGTCTTCTGGTTCATAATCAAA 435510 30 100.0 35 .............................. CTGCTTATCATGGGGAAGGTAGTGGGCTGTTTCTT 435575 30 100.0 36 .............................. TTCATTAGCTATGCAGAACTTGATGATATTTTCTAC 435641 30 100.0 36 .............................. GAACCCGAACCAGTACGTGCAGAAAATACAACAGTT 435707 30 100.0 37 .............................. ATCAGATTATGATTGATAATATTAGTCAGACTGTGGG 435774 30 100.0 36 .............................. TCATTACTCTAAAAAATCTACTAGTGGAACCAAAAT 435840 30 100.0 37 .............................. CCTTAAAAGTTTGTGTATTTGTGTAAGGGATTATAAG 435907 30 100.0 35 .............................. CCAACCCATCATCTTGATGGACCACGAGGAAACAC 435972 30 100.0 36 .............................. TTGTGTTTTGTGTGTTTGTTCTGTGTCAGTTGTGTT 436038 30 100.0 37 .............................. TGAAATACACCACCTTGGGGGGTGTGTGGGGTTTTCA 436105 30 100.0 37 .............................. AAACAACTCAATACTCTAAAGTGATACAAAATGAAAG 436172 30 100.0 36 .............................. ACCGTTATTATGTCCGGGGCCGTCCCGGTCCGCATA 436238 30 100.0 35 .............................. GCCGTACATACGGATAGTTGGGATGTTGATAGTAC 436303 30 100.0 37 .............................. ACATTTATTAGGTATTTAATTGTCCTCTCCTTCGTCT 436370 30 100.0 36 .............................. CCTGGAAGTCATGGCAGAAGCAGGAAGAATCCAGTT 436436 30 100.0 36 .............................. TCTTCATGGATGGGTGAATGTTCTGGGAACTGTTCA 436502 30 100.0 37 .............................. GGCAATATCATCCTCAATCTTCAGATAAGCATCAGTT 436569 30 100.0 37 .............................. TTTAGTCACAATATCATTTTGAAGTAACGCCATCCGG 436636 30 100.0 37 .............................. CCTATCACCATCCAGAGGGTGCTCTGTCCCTGTGTTT 436703 30 100.0 37 .............................. TAGATCTGAAATTTAAAGGAGGCATCTAATTGGTTAA 436770 30 100.0 37 .............................. CAAGAATTATCGTCATTGATGGTAGTGGATTATCATG 436837 30 100.0 35 .............................. AGACGGAACAACAACATTAGGCGAAGCCAAAGAAG 436902 30 100.0 36 .............................. ATATATGAGTCGGTCTTTTCTGTGGAGTCCTGATGA 436968 30 100.0 36 .............................. TTGTCACAGGTCCGGAGGTATACATTATGCGCTGAA 437034 30 100.0 36 .............................. GCTAGCTAATTTGGAAGGTAAAGAGTTCTTTGTGAA 437100 30 100.0 36 .............................. GGGTTGTTTCGTTGGCTGTTAGTAAGAATCTGCTGT 437166 30 100.0 36 .............................. GTTCCAGGTTGTCTTCGAGGGTATCATAGTCAATCC 437232 30 100.0 37 .............................. CTGGCTATGACTCTGATGAAAGGAAAGTATTCTACAT 437299 30 100.0 36 .............................. TCTGGGATGTTGGACAGGTCTTAACACTGGTAAAAA 437365 30 100.0 36 .............................. GTGCAAACGTTAAATCACAGCTCGAAACTATCCTCT 437431 30 100.0 36 .............................. CCTTTATCAGTGATTTAGCTACGGAAAATTTAGATA 437497 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 158 30 100.0 36 ACTAAAATCAGACCATTTTGGGATTGAAAC # Left flank : GTGAATTAGTAGATATAAAAAAGAATTTAAAAGAGATTATGAATAAAAATGAGGATTCAATAATAATTTACACCCTAAGAACAGAAAAAGCAATGAAAAGAGATGTGATGGGGATTGAGAAGGCGCCTATTGATGGGATACTATGATCAAATATTCTTTTTAACCTTTAACTTCCTTCATCTCTTTTTAAAAAACATGATACCTCCTGATTAGGGGTCGTTTTTGAATGAGTTTCAAGTGAACCTTTAAAATAACTTAATTTTATTTTATTCTCTGATCAATAATTATTCATTTTGTTGTTGTTTTTTTGAGTCATAGCTCACCTAAAAGTGTTGAATGTTAATTATGAGTGTGGATGCTGAATAATTTCATGAAAAATCTTTAATTTTAACCTCGTCTTCCCATATAAAAGAATTGACTAATCTGGGAACGACAAATATATGTATACAATCGGGGAGATAATATTAAATATTGGGTAGAATAGGGCAAATTTCGACCCT # Right flank : CAAACTATGTTAAAAGAAATAGCTTTGGAATATCTTCACATAATTATAGGCCATATGGTCTAGACCACTGGGTTTATATATAATAACTGCTATACACTTAAAATCGTGAATATTAAACATTAGGGGGAGATTGTTCAGGAACTATACTACTTGGCATTTGAATAATGAGTCATAAGGGGATTAAAATGAAAGAAAAATCATTTAAAAGAAAGAAAGAACTTATTGAGGCTGCTTTAGATGAATTTACAACCAATCGCTATGAAAATGCTTCTTTAAATAAAATCATCAAAAATGCAGGCATCAGTAAAGGTACTTTTTACTATCACTTCCAGGACAAACAGGCAATTTACATTTTCCTGCTTAAAACAGCTTATGAAAAAGAATGGGAATACATTAATAAACGTGTTAAAGAACGCGCCATAGATTTTGAAGGAAAAGACTTTTTTGAAAAATTCAAGTTACAATCTCAAATTGGGATGGAATTCGGCATAACATACCCT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACTAAAATCAGACCATTTTGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 2 2051818-2052507 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017768.1 Methanobacterium subterraneum strain A8p chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================================= ================================================================== ================== 2051818 39 87.2 36 ........................C.AA.AG........ TTTCCAGTATTGGTGATAGCCCCACCAAAACTATAG 2051893 38 84.6 42 ..-A....A..T..........T...T............ CCTCCACCACTATTGTCGATGGCACCACCACTTTTACTATTC A [2051898] 2051974 39 97.4 42 ..A.................................... CCTGCCCCATGATTATTTTCGATGGCACCACCATAACGAGTT 2052055 39 100.0 39 ....................................... TCTGCACCATTATCATTGCCGATGGCACCACCACTGTCC 2052133 39 92.3 36 ......................T...AA........... CCCGCACTGTTATAATTGTAGATGGTACCAAAACCT 2052208 39 100.0 39 ....................................... CTTTTTCCAAGATCATTGTAGATCGCACTACCCCGAGTT 2052286 39 94.9 39 ......................T...T............ CTTGCACTCTTATTGTAGATGGCACCACCACCATGAATC 2052364 39 92.3 66 .A.........................T....T...... ATTCCACTCTTAAACTCATTGTAGATGGCACCACCACCATAACGAGCATAAGCTCCATCATAAGTT 2052469 39 97.4 0 .............................T......... | ========== ====== ====== ====== ======================================= ================================================================== ================== 9 39 94.0 42 GCGGTGTTGTTGGTGAATGTACAGTTCGTCACAGTTAAA # Left flank : TTATTGGTGTTGAAACTGTTTGATTATCAACGGTGGCTGTGATATTTCCTGAGCTGATGGTTGTTGTTGTGAAAACAGATGTTGCACTACCATTCACCCATACAGTAGATACTGGTTCTAAGTTTCCCATGTCACTTGCGAAATCCACAACTATTCCATCTGGTGCATGGCCGTTTACTGGGTCATGATAAGTTCCAGTATTGTCATGCAGTAAATCAACAATAACAGTCGAATTACCGCCATAGAAGATATTATCAGGGTTCGTTGTGATATTCAGAATTAACCAGGAACTTACGTCAACACTACCGTGAACATCATTAGACACATAAATTGATGGATCAAGGTTTGAACCCCACCAGTTAAACCTAGCATCTATAATACCATAGTTACAGTGGATCTGACTGTTAATTGCATTGTTTCCAACAATCCTGTTGAAATGAACAACAACAACCTTAGAAGCGTCCGGTTGATAACTCCAAATAACACTACCAGTACTAGTT # Right flank : ATTTCCACCATTGTAGATGGCACCACCCATCTCTGAGGTGCTGTTTGTGAGTGTTAAGTTAGTTATATTGGCTGTTATTCCTGATAGTATGTGGAATATCCTGTTCCCGTTTCCATTGATTATTGTGTTCTTCTGATTTTCACCCGTGATCGTCATGTTCTTATTTATAGTTATCCAAGATTCGTTGTAGGTTCCTGGTGCTATGTAGATTGTTCCGTTTGTTGTAACTGTGCCTGTGGCATTTGTTATGGTCTTTTTGGGTCCGCTTGTGGTGTTGTATGTGGGTGATAGTCCGTCCCATGTGTCGTTTCCTTCTGTACTGACGTATATTGTGGAATTACTTGATGTGTTGGCTGCGCTTACAGCACTAACACTTAAAGAAAATAAAACCACACCTATTAGTAGTAGAAAGGGAATTTTAGGGATCTTTTTTCTATTTTGGGTTTTCATTGGTCTTTTTCACCTCCTTTATGTCTGTTTTAGATATGGATGGTATTGTC # Questionable array : NO Score: 5.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:-0.25, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGGTGTTGTTGGTGAATGTACAGTTCGTCACAGTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.41%AT] # Reference repeat match prediction: F [matched GCGGTGTTGTTGGTGAATGTACAGTTCGTCACAGTTAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.80,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //