Array 1 13411-16296 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHXQZ010000013.1 Prevotella melaninogenica strain SCHI0044.S.1 Contig_13_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 13411 47 100.0 30 ............................................... GAGTTCGTTACATCTCTGTGTGACTGTTGG 13488 47 100.0 29 ............................................... TACGACGAACTATAAGACGACAAAAAAGC 13564 47 100.0 29 ............................................... CGACCGACAACTGCGCAAAGAACATATAC 13640 47 100.0 29 ............................................... GCCTTCTGAATACTCTCCCAGATAGCTTC 13716 47 100.0 30 ............................................... TCATATAGAAGCCTTTCCAATAAGCCGATA 13793 47 100.0 30 ............................................... TAAACCCTCTGTTGAAAAAAATGTTATGAC 13870 47 100.0 30 ............................................... AAGCTATCGTTGAAACTGCTACGATGGGTC 13947 47 100.0 30 ............................................... GCCAAAGATTCATCAACTGGTTAGATTTAG 14024 47 100.0 30 ............................................... CAAGTAACGGCAACGATTCTTCACCTCGTT 14101 47 100.0 29 ............................................... TAACCTCAATTCCGCTGATTTTATTATGC 14177 47 100.0 30 ............................................... GTAACCGAATGAAGAACCTTTAAGCGGTAA 14254 47 100.0 30 ............................................... ATGGGTTTGATCCGGACAGGAAGTGTGCAG 14331 47 100.0 29 ............................................... AATGAGGTTGGACAGGCTGTAGATGGTGC 14407 47 100.0 30 ............................................... AGATGGTAGGTGAGGAACTAGTAAAGGTAG 14484 47 100.0 30 ............................................... TACATGTGAATCAGAGTAATTATGACAGGT 14561 47 100.0 29 ............................................... AAAGGCGGATATTTGACAATTACATCTGG 14637 47 100.0 30 ............................................... CGCTGTGGCAGTTCGTGCGACTCAAAACAG 14714 47 100.0 29 ............................................... GATGCTTACTTTCCAACTCGTGAAGTCAA 14790 47 100.0 30 ............................................... ACATTGAGGAAGCGGCAAAGCAAAAAGAGG 14867 47 100.0 30 ............................................... ATTCGTCAATGAAGGAACAGCATCACCGAA 14944 47 100.0 30 ............................................... TTACCTTGACCGTCTTATTTTTGAGCAAAC 15021 47 100.0 30 ............................................... GAATAGGTCATCAATACCATAAGAAAGAAG 15098 47 100.0 30 ............................................... TATTGGTTCAGGATATAGCGATGATTCCTT 15175 47 100.0 29 ............................................... CACCGAGGTCATCGTTGACACATACACAC 15251 47 100.0 29 ............................................... TTGGAAGGATGCTGTACGTGTTTCTTTGC 15327 47 100.0 30 ............................................... ATGGTAAGCGTCGAGTGTTCGTGCAAGCCG 15404 47 100.0 30 ............................................... TAGGGCAGGTAAAGGTCCACACGCACTCAC 15481 47 100.0 30 ............................................... CGCTCTTCCTCGCAGGTTGTTCAAGTACGA 15558 47 100.0 30 ............................................... ATTTCCCTGTCAGACTTTTAGTAGTGCAGG 15635 47 100.0 30 ............................................... GTGCAAAACCTAAGATTATCTGGCCTATTG 15712 47 100.0 30 ............................................... ATCTCTGAAAAGATACTCCCACAATTGATA 15789 47 100.0 30 ............................................... TTACCTTGACCGTCTTATTTTTGAGCAAAC 15866 47 100.0 30 ............................................... GAATAGGTCATCAATACCATAAGAAAGAAG 15943 47 100.0 30 ............................................... TATTGGTTCAGGATATAGCGATGATTCCTT 16020 47 100.0 30 ............................................... TGAGTTAACCCCTAAAGCTGTTATATATGA 16097 47 100.0 30 ............................................... AGGAGTTAACGCTGCCCATCTTGTGAAACT 16174 47 97.9 29 ............C.................................. AGTAACTAAGCGTAATAGTTATATATTAC 16250 47 97.9 0 ..............................................A | ========== ====== ====== ====== =============================================== ============================== ================== 38 47 99.9 30 GTTGTACGTGCTAATGCAAAGATACACATTTTGAAGCAATTCACAAC # Left flank : AACTGCAAGTCTTGCGAAGTGCTATAATGGGGAAGCTCGTGAAATTTCTTATCCTTCCTTTCTTTGATGCAACGACTTAGCGAATATAGGGTTATGTGGGTAATGGTCTTTTTTGATCTTCCAACGAATACAAACAAGGAAAAGCGTGCTTATACTATCTTCCGAAAAGATTTGATGAAAGATGGTTTTACAATGTTTCAATTGTCAATCTATGTTCGTCATTGCGCAAGCAGAGAGAATGCAGATGTTCATGTGAAACGTGTAAAATCATTTATGCCTAATTCTGGTAATGTCTGTATTATGGTCATTACTGATAAACAATTTGGTGAGATAGAGCTTTTTCGTGGAACTCAGCCACAAGAGCCTAATGCGCCAGGACAGCAACTAGAATTATTCTAAAAAAGAGTCCCATCATTGTGATAGGACTCTTTTTGTTTTGCATTTTTTGTTTGTACAAAAGTCTTGTTACTTGCTGTAATACAGGTAAATATAACTTTTAA # Right flank : ATAGAAAAGCTTTGCTTAGATATTAAACAGAGTTGTATGTGCTAAAGTCTGCAGCACATCTCATTTATTCACGAATAAATTCCAACCCTACGCCTTTTTACCAGACACAAGGGTGAAGATGATGAGGATGCCGATGACGAAAATGAAGAGGAAGGAACCTAATGCACCGGAATAGATTCTACCTGTGTGTACCTCTAAAGCAAGACTCCAAAGCGACATGGGCTTATCTTTCAATTCTTCTGGCTGTTTTGCGAAGGATGAACCTTGGAAATAGGTTGCTATACATTCCTTGTTTGTGAAATCAGAACTATAGCCAGAGATTGTCTGTTCGTCTGGTGCAGTGCCCGGTATGCGGGGAGTAGAGACCATAGCATCATTGTAGTAAAGTACGACGTTATTCTTACGATCCCAGTAGAACAGACCATCGAAGGAGCCTACTATCCATGATTTGTTGTTTGCATATTGCCAAACGTTTTGTCCCATAACACTCACTGGGGGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTACGTGCTAATGCAAAGATACACATTTTGAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.30,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //