Array 1 39-268 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAUA01000026.1 Streptococcus equi subsp. zooepidemicus Sz57 contig000033, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	==============================	=====================================	==================
        39	    30	 100.0	    37	..............................	ATGATTGCTTTTGGAGTAAAACCGATCGGCTTAGCTT	
       106	    30	  96.7	    37	.....................T........	ATGTTTGAATCAGAAACACGTGATACAAAGCTTGGAC	
       173	    30	 100.0	    36	..............................	ATCTGAAATTGCCCCTGCTGAAAACATGAAATTAAG 	
       239	    30	  96.7	     0	.....................T........	|                                    	
==========	======	======	======	==============================	=====================================	==================
         4	    30	  98.3	    37	GTCTCGCCTTTCATGGGCGAGCGGATTGAA	                                     	       

# Left flank :   GAAATGAAGTTGAAATTGTCGAAAGGTACTTGAATCTCG
# Right flank :  ATATGCGATACGTGACTTTACGATGTTGCGACTCCGTCTCGCCCTTTGTGGGTGCGTGGTCCGTATTCTTTGTTTTTCATGAAGGGATAAATTATATCGTATTCATCAAGCTGATTTAAGCTTTTTATGGTGCTATGTCAAATAGATAAAAACCAATCTGAGGTTGTTGCAACAGGATTGGTTTTTTCTTGTGATTGCAGATCAGACTTTTCAAAAGAACAAGCACATCATCTCAGTTAGACTGATGCTTGATAGCTCCTGAGCTCTGATTTATATAGCTGGTAGGATGTTGCTGATGGCCTAGTCAGGCATATCGTATCAAATTCAAGTTTTTTCATGTCACTGTCTATAGTTTGTCTGCCCTACTTTAGGTAGAATAGAGGTAACTTAAGAGAGGAGTTTATTATGGAATTAACGATGCTTTTGATGGTTTCAGTTTTCATTGCAGGGCTGTTATCATTCTTTTCCCCTTGTATCTTTCCAGTTCTGCCGGTGTATTT

# Questionable array : NO	 Score: 5.77
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCGCCTTTCATGGGCGAGCGGATTGAA
# Alternate repeat :   GTCTCGCCTTTCATGGGCGAGTGGATTGAA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-5.40,-2.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [41.7-45.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0.37   Confidence: MEDIUM] 

# Array family : NA
//