Array 1 65128-64564 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMOW010000065.1 Rahnella sp. H11b NODE_4_length_372278_cov_57.892933, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 65127 28 100.0 32 ............................ TCCGATAATAGCTGTGGATTCTGACGAACGCA 65067 28 100.0 32 ............................ GCCAACTCGCTGTCTACTGCGCCACCCTGCAA 65007 28 100.0 32 ............................ TGAAATTTCAGCATCAGGAAATCATCTGCAAA 64947 28 100.0 32 ............................ CTCGACGGCGCAATGCTGATGTCGCTGCTCGG 64887 28 100.0 28 ............................ ATACGGCTAACGCACTGCAACAGCAGCA 64831 28 100.0 32 ............................ GAGGGGGTTTTGTTTTTTTAGCTTCCGGCGAA 64771 28 100.0 32 ............................ GACAACTGGGCGTTCTTGAAACCACATTGCTT 64711 28 100.0 32 ............................ ATGAATAACGATTTAGAGCAGTTCAGCGAAGA 64651 28 100.0 32 ............................ TGTTCGTGCGGCAGTGCGCATACGCTGCCACC 64591 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 10 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACTAAAACCCTGCAGAACGATTTCCAGATCCCGCAGAACAAAGTGAATCCTGTGATTTTCGCCGGTGACAAAGCCGGGCAGAACACCAAAGTCCAGTGGCTGAAAGACAAGCAGATTAAAATGTTTTACGGCGATTCTGACAATGACATCACTGCCGCCCAGTCCGTGAGCGCGAGGGGGATCCGCGTACTGCGCGCCTCCAACTCAAGCTATAAACCATTGCCGCAGGCCGGTGTGTTTGGCGAAGAAGTGATTGTGAATTCAGAGTATTAAGCAGCCCCGTCCTTCGCATGAAAGAAACAGGGCGCTGAACTGCACCCTCCCCGCGAAGGGGAGGGTTGGGGTGGGGTATAAATGGCCTCTCAAACTGACCCTCTTTTTTGCGCCATCTCTAACTCATTGATTTTACTGAATCACGCGAGCTACACAAAAAAGAGGGTATTTCATCCCATAAAGGGATAATCTTTTGCAGTTCAAAGCGTAAACCTGAAAATTCAACA # Right flank : AATTGGGCGTAATAATATTGGGCGTTTGAAATAAGCCCGTCTGCCGACCGGGCTTTGACAGAAGGTGTATTACTTTTTCAGTTTGTTGTTGCCCGCTTTCCACTCCTCATAGGTGGCTTCGAGAACCCAAAGGCAAACCGCACCTTTATCAGTACTCAGCAAAGACAGGCGCGTTCTTTGATAAAACGCCTCAATTTCAGCTGCTGATTTATTTATGGGTCCCATACAAACCAGGTCAGTGCCAACCAAATGAGGCCAATCATGGGAATCAATAACCTCAAGTGTCTTCAGCGCACCGGCGGTGTTTGTTGACAGTGCCGACGATAAAGCAGTTTCGACGTCTTGTGATTGCTTTACGTCAGCGATGGCGGCCAGTTTGGGAACTTTATCCAGCCAAAATTGTTCCCCGGCGGTAATCCCCTTTAAAGCGACCGGCCAGTCAATATTTGCTGCCATTGAATTCGTGGTTATGCCCGAGAGTAATAGCCGCAATATTAAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //