Array 1 35280-37992 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABHHG010000037.1 Citrobacter freundii strain 4928STDY7387836, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 35280 29 100.0 32 ............................. TGATAAAACAGCGCCAAAAGGTCAAAATTTAC 35341 29 100.0 32 ............................. ACATCTGTTTTTGAATAGCTGGCGCAGGGGCC 35402 29 100.0 32 ............................. GGCACGGTCAGCGTAGTTATCGACAACGTAGA 35463 29 100.0 32 ............................. GAAGAAAGCGAAAAAGCCTACGATGCTGTAAT 35524 29 100.0 32 ............................. TATTGATCCTGAGCCTGTGCTTTCTGCTCTGG 35585 29 100.0 32 ............................. TAATCACAGGAACAGCACAACTCCAGGTAACG 35646 29 100.0 32 ............................. CCCTGACGCAGCCGACACGCTGATGGGGATGT 35707 29 100.0 32 ............................. GCGATCACCTTCGTTAACGGCAGTAAGCTGAA 35768 29 100.0 32 ............................. TAATACGTTTTCGGCGCAGCGCATAGCGGATC 35829 29 100.0 32 ............................. CTGAGTTTAGAGAGTTTCTCAAAACAGTTGCA 35890 29 96.6 32 ......T...................... TTGTGCAACCATCTAACCAACAATCGCTAAAT 35951 29 100.0 32 ............................. CGCAATGGTTAGCGCCTTGTTTACTCACCCGA 36012 29 100.0 32 ............................. CCAGCCTGTTTCACACACTCATTCCAGTTGGT 36073 29 100.0 32 ............................. CCTTGCGATAATTGCCTGATGGCAGAGGAAGC 36134 29 100.0 32 ............................. TTGTGTGCGTAGCTTTTTGCCAGGGTGAGCGC 36195 29 96.6 32 A............................ ATCCAAACAATGAAGAATTCATTCGCCTCTCT 36256 29 100.0 32 ............................. GCGACGATTTGACGCAGCTCGGCGCAAACCTG 36317 29 100.0 32 ............................. ACGCTGGATTATCTGGACTACCTGGAATCGGC 36378 29 100.0 32 ............................. TATCGCCCGTCATATGTCCCGTCACTGTAACT 36439 29 100.0 32 ............................. CCTCCCGACGTTTGTCGGGAGAATTCCCCACA 36500 29 100.0 32 ............................. GAATTATGATTTATGTCAATCCCTAAAAAATG 36561 29 100.0 32 ............................. GCATTTTATTTACCCCTTAATGCATTGTAATA 36622 29 100.0 32 ............................. ACGCACCGTGGCAACTTTTCCAAAATAAGCAA 36683 29 100.0 32 ............................. CGCGATTGCGCATTTGGGGTGTAATAATTCCT 36744 29 100.0 32 ............................. GCGGCAGAATACGCAGCAAACGCACAGGTAAG 36805 29 100.0 32 ............................. CCGGATCCCCTATTCCGCGATGAGTACGCAAA 36866 29 100.0 32 ............................. CGACAGAAAACAGGTTTTGCGGAGTTCGGTAG 36927 29 100.0 32 ............................. ATATTTTTCATTAGCGGGTTTTGTGGATTTAT 36988 29 100.0 32 ............................. GCAGCGATCTTACGCAGCTCGGCGCTAACCTG 37049 29 100.0 32 ............................. CATAAGCATTGCAGTTGTGCTATCCGCTATTA 37110 29 100.0 32 ............................. CACAGCCAAAAAATATTGCTAATGCCGCAAGG 37171 29 100.0 32 ............................. GGGCAGACACTATTGAAGTGGCCTATCTGGAT 37232 29 100.0 32 ............................. CGTTGACCGTCATCAAAAATGGTACAACCTCG 37293 29 96.6 32 ............................A GCTGCGACTCGTAACCCAATACGCCGTTAATC 37354 29 100.0 32 ............................. CCAAACGTCGCCAACGCAAGAAAACCGGCGAA 37415 29 100.0 32 ............................. GGCATCACCCTGGCGATACAGGGCACACAGGA 37476 29 100.0 32 ............................. GCTGTCGAGTATTGTGTTGCGGCCTTTCCGAT 37537 29 100.0 32 ............................. CATGAATTGATTATCTAACTTTCTGGGTTGTT 37598 29 100.0 32 ............................. AAGGTAGTCAACATCATCGCGCAGAACATCAA 37659 29 100.0 32 ............................. TTCCCACACTGGCAGACGCTTGATGTCGATTA 37720 29 100.0 32 ............................. CGCTATCCATCGACACGATGGCAGCCGCGAAA 37781 29 100.0 32 ............................. TCGAAGGCGTTCAACATCGCCCAGACAGAGCA 37842 29 100.0 32 ............................. GCAGCACAGGGCGTTGAATGGATACCAGCGAA 37903 29 100.0 32 ............................. GAACATCCTGAAGTACACATCAAAAACGAACC 37964 29 89.7 0 ............T............T..A | ========== ====== ====== ====== ============================= ================================ ================== 45 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : ATTGATTGAAGAAGTGCTGGCTGCCGGGGAAATTGAAATCCCTAAACCTTTTGAAGATGCCCAGCCTCCGGCGATCCCTGAGCCTGTTTCATTGGGCGATGCAGGGCACAGGGGGTAGCACCATGAGTATGCTTGTTGTTGTCACCGAAAATGTTCCTGCTCGTTTGCGCGGTCGTCTGGCTGTCTGGTTATTAGAAGTTCGCGCAGGTGTTTACGTTGGCGATACCTCACGTAAGGTGCGAGAAATGATCTGGCATCAGGTCACTACCCTGGCAGACGAAGGGAATGTTGTTATGGCTTGGGCGGTGAATAATGAGTCTGGTTTTGATTTTCAAACATGGGGTGAAAACAGGCGCATGGCGGTGGAACTGGATGGATTAAGGTTAGTGTCATTCCATCCTTCGTAAAATCAATGGGTTATAGTTCTTTAATAATGTGGAAAATTTGGTGAAATTTTTCTACGGCTATAATCCCTTTTAGATCAGTGATATAGTTTTAGA # Right flank : ACTTTGAAAGCAGAAATATTATGGAGCTGGATGGGTTACGAGGATTTACCCGCCTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCCGCATCGTCGAAGACCTCTGCGTCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //