Array 1 22811-23870 **** Predicted by CRISPRDetect 2.4 *** >NZ_OMOH01000013.1 Propionibacterium sp. JV5 isolate propionibacterium_jv5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 22811 36 100.0 38 .................................... CTGACCTTGGGCTTGTACTTGCGCAGGAGCTCGCCCCT 22885 36 100.0 37 .................................... CCCCACGAGCCGAGCGTGGTGTTGTCTCCGGCGTCGA 22958 36 100.0 36 .................................... GTGCCGTTCACGAAGGGGATGAACCGCTTCTTGCCC 23030 36 100.0 37 .................................... CACACCTCGTGCCGAGTAGCGCTGGTCCTCTCGGTCG 23103 36 100.0 39 .................................... CCCTCGCGCCGACGATCTTCTCGCGCATTCGGTCCAGCC 23178 36 100.0 37 .................................... CGGTGCCGGTGACCTGGCTGATACCGATCATGGCCAG 23251 36 100.0 35 .................................... ATTTGGCATGGTGGTGTGCCTCACTTTCGCTTCGT 23322 36 100.0 37 .................................... ACCTGACCGCCGGCTGCAAGAACCCGTCCGGGCAGGC 23395 36 100.0 38 .................................... AGTACACCGCCAGCGAGGACTCGTGGGCCACCCTGCAC 23469 36 100.0 36 .................................... CTATCCTGCACGGCAACCGAAACAGGAATACCCTGA 23541 36 100.0 38 .................................... CCGACGGTGTTCTTGGACGGCCGGTCGTTCGGAATCTC 23615 36 100.0 39 .................................... ATGCCGCGGCCCCAGTAAACGCCATCACCAGACCCCTGA 23690 36 100.0 36 .................................... AAGCTCAACAATTGCATAAGGTTCGGGGCACTCATC 23762 36 100.0 37 .................................... AGTGGCATGTCCCCACGGTTGCGTCTGACGGGTGCGT 23835 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 15 36 100.0 37 ATTTCCCCATCTATTCAGATGGGGCTCCATTGAGAC # Left flank : GAGAGATCCCAGGGTACAGGCCCTTCGTGACGAGGTGAGGAACATGGCGAGACGCCGCTATCTGATCGCCTACGACATAGCGAATCCGAAAAGGCTGAGGGCCGTTGTCAAGTTGATGGAGGACTTCGGTACCCGGCTGCAGTACTCAGTCTTCCTGTGTGATCTCAGGCGGGCAGAGCTCGCGGTCTGGCGTGCGGCCCTGGCGGACGTTGTCGAGTTGAAGGAGGACTCGGTGATCGTCATAGACTTGGGGGCAGTGGGTGTGACCCCGATCGAGGTCATCGGTCTGGCGAGGAACCTTCCCGGTCACGGCGCCGTCGTCGTGTGAGGCCTGCGAGAGGTCCTGCCCCGCCGGTGCCCCGCGGGACCGCTCGCAGCCTTGCCAGAGGCCTGTTAGCGTTGACAAAACCATAGCGATGACCTACGATCTGGGAGTGCTGGTGGGACCGCTCGCAATCGGGTTCGTTTCCCCTTGTCAGATGTCACAAAATCTGATAGCG # Right flank : CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTCCCCATCTATTCAGATGGGGCTCCATTGAGACAGTGGCATGTCCCCACGGTTGCGTCTGACGGGTGCGTATTTCCCCATCTATTCAGATGGGGCTCCATTGAGACTCGTCGATGCGCATGGTGACGTCCCAGCCCTGCTCGCATTTCCCCATCTATTCAGATGGGGCTCCATTGAGACTTCAGCTCGTACCACGTCATCGACTGGTGCTCCTGATTTCCCCATCTACTCAGATGGGGCTCCATTGAGATTTCGGGTTCGCCTTACGTTTTCTGCTTTTAATCTGGTTAAATGAATAACGGTGGGGCTACATCATATGATGTAGCCCCACCGTTATTCAGTATGCTTATGCTAGTGAGAGTTGTGTCTGCGGCGCTGTTTATTTGGCCTGGGGATGAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCCCCATCTATTCAGATGGGGCTCCATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.40,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 2 23969-24221 **** Predicted by CRISPRDetect 2.4 *** >NZ_OMOH01000013.1 Propionibacterium sp. JV5 isolate propionibacterium_jv5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 23969 36 100.0 37 .................................... AGTGGCATGTCCCCACGGTTGCGTCTGACGGGTGCGT 24042 36 100.0 37 .................................... TCGTCGATGCGCATGGTGACGTCCCAGCCCTGCTCGC 24115 36 100.0 35 .................................... TTCAGCTCGTACCACGTCATCGACTGGTGCTCCTG 24186 36 94.4 0 .............C.....................T | ========== ====== ====== ====== ==================================== ===================================== ================== 4 36 98.6 37 ATTTCCCCATCTATTCAGATGGGGCTCCATTGAGAC # Left flank : ATTTCCCCATCTATTCAGATGGGGCTCCATTGAGACCTATCCTGCACGGCAACCGAAACAGGAATACCCTGAATTTCCCCATCTATTCAGATGGGGCTCCATTGAGACCCGACGGTGTTCTTGGACGGCCGGTCGTTCGGAATCTCATTTCCCCATCTATTCAGATGGGGCTCCATTGAGACATGCCGCGGCCCCAGTAAACGCCATCACCAGACCCCTGAATTTCCCCATCTATTCAGATGGGGCTCCATTGAGACAAGCTCAACAATTGCATAAGGTTCGGGGCACTCATCATTTCCCCATCTATTCAGATGGGGCTCCATTGAGACAGTGGCATGTCCCCACGGTTGCGTCTGACGGGTGCGTATTTCCCCATCTATTCAGATGGGGCTCCATTGAGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : TTTCGGGTTCGCCTTACGTTTTCTGCTTTTAATCTGGTTAAATGAATAACGGTGGGGCTACATCATATGATGTAGCCCCACCGTTATTCAGTATGCTTATGCTAGTGAGAGTTGTGTCTGCGGCGCTGTTTATTTGGCCTGGGGATGATAATCGGCGTCGGAGTGTTAGCGGCCAAGTCGACGGGCGACAGGCCTCGCTTGTCTTTCGGCTTGCCAGTTTTTGAGTCGCTCTTGTTGTTCTCCTTGTTCTCATCAAGGGTCATATAGCGAACCTCGGTGCCATCGCTGTAGCCGAACGCGGCACGTTGCAAGGCCTTCACCCAAGGAGTCTTCGGGAGGTTGTTGCCGTTCGGTAAAGAGAATTCCGCGATCTCGGCTGGTGATGTCACGCTGCCAAGACAGCCATTCAAATTCACATAGTCGCTTGCGAGCTCTTCATTTTTAACTGCACGTAGACCATTCTTGGCAATTCTTGTCTCCACAACGCCAAGACCAAATGG # Questionable array : NO Score: 2.79 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCCCCATCTATTCAGATGGGGCTCCATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.40,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 2-329 **** Predicted by CRISPRDetect 2.4 *** >NZ_OMOH01000029.1 Propionibacterium sp. JV5 isolate propionibacterium_jv5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 2 36 100.0 37 .................................... AGTGGCATGTCCCCACGGTTGCGTCTGACGGGTGCGT 75 36 100.0 36 .................................... CCACGCTCCACCGGGAGGCCATTAACGAGGCGCTCG 147 36 100.0 38 .................................... TCATATTCCCTGAGCTGTTCAGCGGTCATCTGGATGAC 221 36 100.0 37 .................................... AGTGGCATGTCCCCACGGTTGCGTCTGACGGGTGCGT 294 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 5 36 100.0 37 ATTTCCCCATCTATTCAGATGGGGCTCCATTGAGAC # Left flank : CA # Right flank : | # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCCCCATCTATTCAGATGGGGCTCCATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.40,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 217185-219024 **** Predicted by CRISPRDetect 2.4 *** >NZ_OMOH01000004.1 Propionibacterium sp. JV5 isolate propionibacterium_jv5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 217185 36 100.0 36 .................................... GTTCCGGACGCCCCAGTTAAATTGCTCGATGGTTTC 217257 36 100.0 36 .................................... GCGTTGATCCCCGCGATGGCATTCTCATAGTCGCCT 217329 36 100.0 36 .................................... CTTGACAGTGTGCACGCCCGAATGTCATTCACCGAA 217401 36 100.0 35 .................................... CCTATGACATGGCCGTATGGGAGTGATGACGATGA 217472 36 100.0 35 .................................... ATCAGCTTGAGCAGCATGCTCTTTAACTGAGTGCC 217543 36 100.0 37 .................................... TCGTGGACTGCATTGAGGGTTGCTGCCACCACGCCAG 217616 36 100.0 37 .................................... ACGGTGCGAGGCATGGTGGTCACGCAAGACAAGAAAA 217689 36 100.0 35 .................................... TTCTGAAACTCGTTGACGTTGCACATGAGCACATG 217760 36 100.0 35 .................................... TGTTGGACTTGCCGAACATCTTGATCTGGTGTGCC 217831 36 100.0 37 .................................... CAGTGGGCGACGTTGACGGCGACGGCGTTGCCGGCCT 217904 36 100.0 37 .................................... ACCGCCATGAGGAAACTGCCCTCGCCCTGTGCGAGGG 217977 36 100.0 37 .................................... TTGCGACTCAAGTCCTCAACGTCTCTGCCACGGCCCA 218050 36 100.0 35 .................................... TTGCCGTAGTGGTCTGCGAGGCCACGCAGGGCCTC 218121 36 100.0 37 .................................... AGGGTTTCGCCGGCGGTGATGATGTAGACCTCGGGGT 218194 36 100.0 36 .................................... AGGACGATGTGTACGACACGGCCGTTGTCGAGCAGT 218266 36 100.0 38 .................................... TCTCATGTACTCCGGTACCTCACCGGAGTGCTGTGCCC 218340 36 100.0 36 .................................... GGTCATCATAGCTAAGGGATATGAAACTGAACTCGT 218412 36 100.0 37 .................................... CGCTCGACCTGGTGGACGAACAGACCCGCGAGCGGGC 218485 36 100.0 35 .................................... GCCGAGCTGGACAAGGAGATGCTCGCCCAGTACGA 218556 36 100.0 36 .................................... GTGAGGAACCCCGATCTCGTCACCCAGTGACCCTTC 218628 36 100.0 35 .................................... GCGGCAATGGTGGTGACGGGTTCGGCGTGGGCCGG 218699 36 100.0 36 .................................... GGCGCCAGCCGGTACGAGGTCGCCCCCCAGCTCGGC 218771 36 100.0 36 .................................... GAGATGGAGGCGATCAACCCGGCGATCTCGGCGGCC 218843 36 100.0 37 .................................... GCCAGGGCTCGTGACACTGACGACTTACCGACACCGA 218916 36 97.2 37 .........T.......................... TGGTCTCGCTGGGTTTCGGGCATGGCGGCCAGGATCG 218989 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 26 36 99.9 36 GTTTCCCCACCTGAATAGGTGGGGCTCCATTGAGGC # Left flank : AAGGTGCGGGTGCGCCCCTCTTAGATCAGAGCGCTGAGACTCCCACACGAACCCGCGAACCGCTGGAACACTCCCAGGTGAGATGGCGATGACATCAGCGATGCCCGCGGATGGACGGTTGCCGCCCGCCACCGTCTCGATATTCCCCGCCGCCCCGGCGAAACCATTGAAATGTTCAATGCATGGCACCAGAGATGGCGCTCGCCGAGGGCTGGCTTCCTTCGACGGGAAGAGGACCAGTGGTTGCCGTTGACCCGACTCAGGAGAGTGTGACGGGCATGAGGCGCATCGAGAAGCCATTTCGATGTAGGATGATGTCGACGTGGGGCCAGTGCGAGAGCCGGTGTCCCGCCACCGCCCCGCGTGAGCGCTCGCACCCTTGTCAGAGCCATGTTCGTGTTGACAAGACCATAGGGACGCCCTACGATTCCGGCAAGAGCGAGGGAGCGCTCGCAACACGAGGTATCGCCGCTTGTCAGCCCCCACAAAATCTGACAGAC # Right flank : CGATTCTTTGATCGTCTCCAGGGCGATTCAGACCCCAGATCGTGAAGAACCTGAAACCGGTCTACGGGGCTGCCGATGCCACCGATGCCGGGCAGGCGTGTGAGGAGTTCACCGCCAAGTGGGGCAGACCTGCCTCGCGATCGTCCGGCTCTGGCGCGGCGCCTGGGGTCAGCAGAGCCCTGTTCCTGGACCACCGAACCTCGGGGAGCCGTAAGGTTCTCTGCCCTCTCGAACCCGAATCGAAAGCCTCAATGCCAGGTTCGGTCGCGCGGTGAGAGCGAGGAGCCACTCACCAGAACGAACTGGCCGCATTGAAACCTTGTCCCTGGCCGCCAGATCGCCCGCACCGTACCGCCCGGCCCCGGGGCGAGCACTCGCGCCAGGACTCGGAGGCCAAGGATGAAGAAGAGGGGCCGCGGAACGATCGTTCCGCGGCCCCTCTTCTGGTTCGAGTCAGCCCTGGTGGGCCTTGCGGGCCGACCAGGCCGAGGCGACCATGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCCCACCTGAATAGGTGGGGCTCCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.40,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //