Array 1 41064-41825 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011542.1 Corynebacterium mustelae strain DSM 45274 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 41064 29 100.0 32 ............................. GAAAAGATCAGATTGAGTCTCCGCCAAAGCAT 41125 29 100.0 32 ............................. CACATCGGCGGCATGGAGTCCATTATTTTCGA 41186 29 100.0 32 ............................. GATGCGGCGAATATCATTGGCGTTTCTCCATC 41247 29 100.0 32 ............................. CCCAACCGGTCATACCGCGCCGGGTTGGTGAG 41308 29 100.0 32 ............................. CAATTGACGGGTATCGTCAACCGACTTCGCCG 41369 29 100.0 32 ............................. CATCATCGACAGGTGGCGCAAAGGCGTAGATT 41430 29 100.0 32 ............................. GACGGGGAATAAAATCCTCAATACCCACAAAG 41491 29 100.0 32 ............................. GATGTGGAGCGAGACCCAATACGGCTAGTACT 41552 29 100.0 32 ............................. ACGGTTGGCTGAGTTTAATTGCAGCCTATCCG 41613 29 100.0 32 ............................. GATCTTGCTTACGATGGTCTGGCACTCTAGGT 41674 29 100.0 32 ............................. CTGCTGAAGACATCGGTATTGGTATCGTCACC 41735 29 100.0 32 ............................. GTATCCGGCGCACATCTTGAACCCCGGTGGGC 41796 29 96.6 0 ............................A | C [41821] ========== ====== ====== ====== ============================= ================================ ================== 13 29 99.7 32 GTATTCTCCGCGCATGCGGAGGTAGTTCC # Left flank : TCTGTGTTGATGGAAATTCTCGAACCTCACTTACCAGCACGTGATGATGATCGCCTTATCGGTGGAAGAAATAATGAAGTCACTGGCCATACCCAGTACGGATAGGTGTGAAAATGTTCGCAGTTGTTAGTTGCACAGCGATTCCCGATCACGTGCGTGGCTATTTGACACGGTTCTTTTCGGAAGTTTCAGTAGGGCTATATGTGGGGATAGTAACTCCCGTAGTGCTTGAGAATCTGTGGGAACGTATCGAACAAACCATAGTGGAAGGTTCTTTTACCCTGATTTATAGTTCGCATGAGATGGAGCAAGGCTTTGTAGTTAAAAGTTTTGGCCAGCAGTCACGATCAATCGTCGATATTGACGGGTTGCTTTTAGCAATCCGAATGCCGATGGAAGAAGAAATACTAGAGGTTGAAAGCGAAATGGTATCTAATTCTCCGGAATCAAATTTCGCATAAAAGCGAGACTTTGCTATTAATATATCAGGCTCACGTAGT # Right flank : AGCTGTGTGGTTCGCGAGGGCGCTGTGGAATACTCAACGAATTGACCGCGCCGGGATCCGGATACCTATGTTTATGGACTTGTTGAAGCTCTAGCTGGGAAAATGCTGGTGAAAAGCATCGGAAGCTCGAAGAAGGAGGATTCTCGAATGTTGTGGATAAATACGATGTATTCATAGTGGACAAGGCAAATCTTGCTATTAGAAGTTGATACAGTGACATTAATGAATTTCTAAGGAAGGAGGTGAGAAGTAATGCCCGCTAATGATTTAATTCAACGGGTAGCGGATGAAGCGCGACCACCTGCAGTGTTGGGTCGGTATCCGGGGCTAGAGATTTTTCTCGAGGTCCTACTCGATGATCTTGTTACTTCTAATGCGTGGTTGTCGCTTGAACTTAAGAAGCCGTTCTTAGCATTGTGGGTTAATGAACCGGAGTTTGACGATCCTGATCTTGACGACCCAATTGAAGAGCTTAGTTACAATAATGTTCACGCGTTTGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCGCGCATGCGGAGGTAGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 2748620-2754129 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011542.1 Corynebacterium mustelae strain DSM 45274 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 2748620 28 100.0 33 ............................ CCACCGAAGAAAACAAATCAGCCCTTGTGGACA 2748681 28 100.0 33 ............................ CGTACAATAATCGTCATGAAACACACCGACTGG 2748742 28 100.0 33 ............................ CCTCCGCCCGCAATTCCTTTTGCCTCCGCAAAG 2748803 28 100.0 33 ............................ CAAACATTACGATTTGTCGGAAGCGCTACGTTT 2748864 28 100.0 33 ............................ GTCGGTGTTGGCGGCGTACAACGTGGGGGGTCA 2748925 28 100.0 33 ............................ CCCTACAAGCGCCGAAAGAAATACACGGCATTA 2748986 28 100.0 33 ............................ CCCCTGCTTAATGCCATCGAACGCAGGTTTGAG 2749047 28 100.0 33 ............................ TGCCCCAACACCTTAGAAGCCACCTCAATACCC 2749108 28 100.0 33 ............................ GCGGTAGATACAGGTGATAATCCAAAGGACAAT 2749169 28 100.0 33 ............................ GTGATCCTCATTGGTTGTGAGACCAAACCGTTT 2749230 28 100.0 33 ............................ GTCCCCTAGAACACCCCATGTGGGAAGCTCAAA 2749291 28 100.0 33 ............................ TTATAAGCCGCCACAATGACACTTCGCTGATTA 2749352 28 100.0 33 ............................ GTTGAAAATGTGGTGTATAACCCTGATACTCAG 2749413 28 100.0 33 ............................ GCCGACACAAAGATACTTCACTGATTACGCTGC 2749474 28 100.0 33 ............................ TGCATAGCCACTCTCAGATGGGGTTTAGCTCTT 2749535 28 100.0 33 ............................ TATCTATCACCAACCCCACAATGGAAGGACAAG 2749596 28 100.0 33 ............................ TGACACTATCGAAAATTTGGACGAACGCAGAAC 2749657 28 100.0 34 ............................ AGCGTGGAGAACGCGATTAGCCAGAATCACGCTA 2749719 28 100.0 33 ............................ GCCCGCCTGCTCTCGCAGGTGCTCCAACTGCAC 2749780 28 100.0 33 ............................ GGGTGACTGAAACCTTGTCTTTCGTAATCCAGT 2749841 28 100.0 33 ............................ GTGGGATCCGGGTTCGGGTCGTGGGGTGCCAGG 2749902 28 100.0 33 ............................ CGTCAACAGGGTCGCCTGCTGAGATGGAGATTG 2749963 28 100.0 33 ............................ TACGGGTGCCGTAACGGTGCGTACCGCATAAAA 2750024 28 100.0 33 ............................ GCTTGCATGAGCTGCTGAAACCAGCAACCCCGC 2750085 28 100.0 33 ............................ GATCGGTTGGTTGCAGCGTTCGCTGAATGCTAT 2750146 28 100.0 33 ............................ GTGCCGAACCATGCGGGGGAAAACGTTCGAAAT 2750207 28 100.0 33 ............................ GATCGGTTGGTTGCAGCGTTCGCTGAATGCTAT 2750268 28 100.0 33 ............................ GTGCCGAACCATGCGGGGGAAAACGTTCGAAAT 2750329 28 100.0 33 ............................ GATCGGTTGGTTGCAGCGTTCGCTGAATGCTAT 2750390 28 100.0 33 ............................ GTGCCGAACCATGCGGGGGAAAACGTTCGAAAT 2750451 28 100.0 33 ............................ GCGACCGGAGCTGGTCAAGTGTCCCCTGATAGG 2750512 28 100.0 33 ............................ CTAACCCGGCGCAAGAATGAGATCATAGCGGAG 2750573 28 100.0 33 ............................ TGGAATTATCCGAGTTCGATTCAATTCAAGGAA 2750634 28 100.0 33 ............................ CCGCAACCTACACTTTTGAGGTAGATGGTGAGT 2750695 28 100.0 33 ............................ CGGCTAGCGAACGGCTTCCCGAATCAGTCTATG 2750756 28 100.0 33 ............................ TTAATTTATAAGGGTCGCCTTATAGATAGTGCG 2750817 28 100.0 33 ............................ TTCCCGTAGTAATTTACCGTGATGGATATTGGG 2750878 28 100.0 21 ............................ GGGCCTACCGAAGGGCCTACC Deletion [2750927] 2750927 28 100.0 33 ............................ ACCTCCGATCAGGTCACACTGTCCGAGGGGTGG 2750988 28 100.0 34 ............................ ACGGTATTTTGATTGCTCGCCACGTATCTGCGCT 2751050 28 100.0 33 ............................ TCCGAGTGCAACCCGCAGCTTTTCGATTGCGGG 2751111 28 100.0 33 ............................ GTAAACGCGCCAAAAACCGTGTGCTTATCAAAA 2751172 28 100.0 33 ............................ TTCGGACTTGCCAACGACCACATGCCAAAAGCA 2751233 28 100.0 33 ............................ TTCCTCACGGAAAGTTTTTGCAGCTTCCAGCAT 2751294 28 100.0 33 ............................ ACACCCCGCTACCAGCGGGGTTGACAACTTTTT 2751355 28 100.0 33 ............................ CTACGATATGGTAGTTGCTAATACTCACGGCTA 2751416 28 100.0 33 ............................ TTAGATTATCTAGGGTCATTACAGCTCCTAAAG 2751477 28 100.0 33 ............................ TTAGATTATCTAGGGTCATTACAGCTCCTAAAG 2751538 28 100.0 33 ............................ TAGTCATGTAAGGCAATCAATCCAAAAGGTAAG 2751599 28 100.0 33 ............................ TCAATCAAAACCCTCTCAAACTCACTCAAAATA 2751660 28 100.0 33 ............................ GGCTGCAAAAACCAAAAACCACCCTAGGGTATA 2751721 28 100.0 33 ............................ CATAGGTGAAGATATTTCATGGTCTTGTAGACC 2751782 28 100.0 33 ............................ CAAATACCTCAACGCAACCCCAATCGAACGGAA 2751843 28 100.0 33 ............................ TTCCATCCGTTCAAAAAACGAATCTTCGCATTC 2751904 28 100.0 33 ............................ CATGTGAAATATCTGTGCGACGAATACCTAGGG 2751965 28 100.0 33 ............................ CAATTCGGACACTTTGTGTTCCCAGTCAGCTTT 2752026 28 100.0 33 ............................ TTACCACCGACAACACCACAAAAACAGCAAACA 2752087 28 100.0 33 ............................ GCGGTGTGATTCTGTGTGAGTCCGAGGGTGGTC 2752148 28 100.0 33 ............................ TTCTTTTCGCACTTCGTCAAGCATCGCCATTAC 2752209 28 100.0 33 ............................ GAAAAACTAATTTCGCAATCGGCAAAAACACTA 2752270 28 100.0 33 ............................ TTGGAGTATCGCCCCCAATTTCCTCACGGAAAG 2752331 28 100.0 33 ............................ GGGGTGGCGACTTCCCCTAGTTGACAAAACATG 2752392 28 100.0 34 ............................ GTTTTCCCATGTAGATGGTACTATCTGGAACCAA 2752454 28 100.0 33 ............................ GGGCGATTTGAAGGCGGCGCAAACGGCGTTGAA 2752515 28 100.0 33 ............................ CGGCATGGGGGAACCCCGAGTGTTTCACACCAT 2752576 28 100.0 33 ............................ GCATCGAACCTTTATCCGCGTGGGTGCAGGAAC 2752637 28 100.0 33 ............................ GGCTGCAAAAACCAAAAACCACCCTAGGGTATA 2752698 28 100.0 33 ............................ GATGAGTATCACGGTAGGGATATGGACGGCTAC 2752759 28 100.0 33 ............................ TGCGACCACAAAACCCCACCACAACCACCAAAA 2752820 28 100.0 33 ............................ GTCCAACACCTCGCCGAACGCATCTACCAACTA 2752881 28 100.0 33 ............................ TCCGTCTGTGATTGCGTGCCAGATTGTTTTATC 2752942 28 100.0 33 ............................ GCCGTTTTATATAAACCTTGTTTGCTAAAGGAA 2753003 28 100.0 33 ............................ GTGGAGTTGGGCTGCGAGAGACAAAGAGGTTAG 2753064 28 100.0 33 ............................ GCACGGAGTCGAGCGGAACCCATGGTGAACCCG 2753125 28 100.0 33 ............................ CGTGAATGCGCCGAGTTCAGGAGGCTGGGGCAA 2753186 28 100.0 33 ............................ TGTGTGGTGTTGTTGGTGGAATTGTTCGGTGTT 2753247 28 100.0 33 ............................ GGAGACTTTCGAGTCGCAGCTTACTCGGATCAT 2753308 28 100.0 33 ............................ GGGAAACCTTACTGACACGTTATTTGAAAACTC 2753369 28 100.0 33 ............................ GTCCAAAACATTAATGATATTCGAGTTCGCCCG 2753430 28 100.0 33 ............................ TGTTTCCCGCGCCCACAACAACCGCAACCAATG 2753491 28 100.0 33 ............................ CACACGCCACCGCAACCCCCACCCACACTGCAC 2753552 28 96.4 33 ........T................... GGTTTTACCGCTACGTATTGCGCCTTCCCAGAT 2753613 28 100.0 33 ............................ GCCGGTCGGCACCCTAAAAAATAAGGAAAAACA 2753674 28 100.0 33 ............................ TACATACGTTCAACATCAAATCGATTAAAGATC 2753735 28 100.0 33 ............................ GCTTCAGCCCGGCGATGACATCGCCATGTTCTT 2753796 28 100.0 33 ............................ GCACAGCGCGGAATCGGGATCTATGGCTGGTAC 2753857 28 96.4 33 .................A.......... CCCTGCGTCATGCCAACACCGTCGATCTCGAAA 2753918 28 96.4 33 .................A.......... CTGCGGAAATTTCCCGGTTCGACGGTCGCACAC 2753979 28 89.3 33 ...........A.....A....C..... CTCCCGAATTTCGACTTTTCCGCCTGTTGCTTT 2754040 28 96.4 33 .................A.......... CTCCAGCTCGTAATACCGTTGCCCTGCGGGGGT 2754101 28 89.3 0 .................A.....C...G | A [2754124] ========== ====== ====== ====== ============================ ================================== ================== 91 28 99.6 33 GTTTTCCCCGCGTGAGCGGGGATGTTCC # Left flank : GAAGACGAACTCTATTTTGAAGCTGAAGTCATTGCACTTTGGGATGAACGCGGGAAGAAAGTAGTTGGTGGTAAGAACTATGAGACAGAAATGCCATGATTACAGTAGTCCTAACCGCCTGCCCAGAGTCTCTACGGGGACATCTAACTAGATGGCTAAGCGAAGTATCAGCAGGTGTTTTTGTAGGTAAAGTGAATCCTCGAATCCGCGACAAGCTTTGGGGGTTAATCGTCGCTGAATGCAAAAATGGGCGTGCCATCATGACCTTCACGACGCGTGACCGCGAACAAGGGTACGACTTCAGGCTGCACAATCATGATTGGGAAACAGTCGACTGCGAAGGGCTCGTCCTAATAAAGCGACCTTCACCGAACCACAGCAAACCAAATTCCAAACCGAAACCAGGTTGGTCCCGAGCTGGACGCAGAAAACGATTTCACCGTTGACCCAAACTAAATCTATAATGTACTCCAAGGAACTAAAACCAATGGTTAATAAGT # Right flank : GACAACCAAGAATGAATAGTGTGGAAATCAGATCGCAGCATCTGAACAGGTTTATACCCCAAACATCGCCGTTTTCTGGCTGCACGTTTCTTACTTTGAGCGAGAATGTCACCAGAACTCACCGAGACGATCGGTTAATATACAGTCCTTATATGCATCGTGTCACTGAGATTCTGTTGGCTGAAACAGACAAAATTTAACCCAAAGTTAATTAGTTCTTCGTAGTTTCCGATGCACACCACAAAACGGACAATTCCCATCACTAATTAGCATGCCAGTTCGAATTCCTATAGCCTTAACCGTATACGCAAACCGACAATCATGTTCACGTTTTCGGTTTTTTCATTAGCCCTATCCCTGATTCGGAGAAGGATATTCCTCATGCCAGATACCTCGCATTACCAACCTCATATGTCTGTGGTTATGACAGATCATCCGGCGTGGTTAGCGCAGAAAGGTGGGCGGCTTCGTATGTGGCGCCGGGTAGATGGTTGCATTCA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCGTGAGCGGGGATGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //