Array 1 669150-670971 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP039126.1 Blautia producta strain DSM 2950 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 669150 32 100.0 35 ................................ ATTTGAACCGTCGAGATATGCCTGCTGTGTCAGGA 669217 32 100.0 34 ................................ CGGAAGGAGGATAAATAAATGGGAATCCCAGTAT 669283 32 100.0 35 ................................ TTCCAATCATTTGACAGCTTTCCATACTTTTTACA 669350 32 100.0 34 ................................ CCTGCTGATTGAGTTTATCCGTCAATTTTATAAG 669416 32 100.0 33 ................................ ATTTAACGAGCGCTCACTTCCCCACTTATATGT 669481 32 100.0 33 ................................ TTCCACGCCGCCTGTAGCCCTGCCGCGCCCACG 669546 32 100.0 35 ................................ CCGTGGGGGCTTGAAGGAAATGAGAAAACGCTTGT 669613 32 100.0 34 ................................ CCTGATGGGTCATCTGACATATTTGTGCCAGATG 669679 32 100.0 33 ................................ TTAGAGCTTTTAATGACCCTGAGTTAAATGACA 669744 32 100.0 34 ................................ ATTGTGGACGCGGATAAAGGCATTGTGGAAAAAA 669810 32 100.0 35 ................................ TTGATATAATCCGGGTTCGGCATGGTGAGCTCCTG 669877 32 100.0 35 ................................ CTGATCCCACAGCCTCCGGTAGTAGACAAGGACAA 669944 32 100.0 34 ................................ GTCAATGGAAGGCGGAGAGGTTGGATACACGAAT 670010 32 100.0 35 ................................ TCCTTTGCCGTTGCAATCAATTTTCCAGCCGGTAA 670077 32 100.0 34 ................................ ATGTATTCCGCACGGAGCTGGCACTGCTTCTCCT 670143 32 100.0 33 ................................ CACTACCCCAATCCGCGTATCCCGGGCCAATGG 670208 32 100.0 37 ................................ GCTTCCCCTGCCGGCCCCCGGAGTGTATCCAGAGCGA 670277 32 100.0 35 ................................ CGTGAAACAGCATGAGAAAGGCCGTGAATCCATTG 670344 32 100.0 34 ................................ TATCTTTTCGGGCTTTCCTATGCCGAACATTTTC 670410 32 100.0 35 ................................ TCCAGTTTCCCGCACTCGTCTACACGGTGAAACTG 670477 32 100.0 33 ................................ AGAGAAGTAATGAAGAGCTGTAGAAAGTTTTTG 670542 32 100.0 34 ................................ TTTTCTACTTTTGGATGGGAAGAAGTTGGAACTA 670608 32 100.0 34 ................................ CGAAAACCGGATGTCCTGCATATGTATGTCACCT 670674 32 100.0 34 ................................ GTTACTGCCCCTCTCAAATGCACAGTAAGGATGA 670740 32 100.0 36 ................................ TTTCTTGGATGCCGCTTTATTTTCTTCGGTCACTAC 670808 32 100.0 34 ................................ ATGCTGTATCCTTCACAATCCTTTTCTTCGCCGT 670874 32 96.9 34 ...................T............ GGTGATGTGATTTTTACTTACAGTGATTCAGAAA 670940 32 78.1 0 ..TA...A......A..A.T......A..... | ========== ====== ====== ====== ================================ ===================================== ================== 28 32 99.1 34 GTCGTCACCTTCGCGGTGACGTGGATTGAAAT # Left flank : TGAAAGGATAACGCCGCCTAGAAAAAGAAAAAACAGGTGGTTCTTAAGTTCAGGCAAAAATACCGCAAAAGCTACTGCGCCGAAGCCATAAGCCGGACAATAAGGTCCGAACAGAAAACCAACGTCAATAAACAGATGTTCCCTGACTGCTGCAACTGACGTTCCAATAGCCCAGCCGATGAAGGAATAGAGTAAGAAAAACCATAGAAGTTGATATAGTGTGTAGTTCAAGTGAGGCCTCCTTTGGGGATGATGTTGGATAATGGTGGTTTTAGTATACCTTATACGCGGATGGAGGAGATGTCAAGTGTAAGAAGGCGGAGGTTTTTGTGCGAATCGGGAGTGAACAGGAATTTGCCGGGGAATTCGCACCTGATATTGAGGTGAAAAGAGGTGGGGGAATAATGAAAAGGGGTGGAGAGTCGTGTTTTTAATTGTAAATAGTGGAAAGATGTGATATTATATACAAAAAGTGGTGGGGGTATTTAGGTATTTTTGCT # Right flank : TTTAAGCTTCTCTTACTAAAGTAGGCTTTATTTCATTTTCGATTTTTATAAATGAAATTATATTTCTATCAATTCATTAACCGAATACTGTTTACGCTACAAAAGTTTTTCATCCACCCATACATTAAGTAATAATTTGCATTGACATACAACCAAATTTCCCGGCATACATTGTAAAAACAACGTTTCCGGGAGATTTTTCCTTGAAAAGTTATATAGAAGAACGTGCTATATCCATAGCCAACTACATCATTGAAAACAACGCAACTGTCCGTCAGACAGCCAGAGAGTTCAAGGTCAGTAAAAGCACGGTACACAAAGACGTTACAGAGCGTCTGCTGCAGCTTAATCCTTCACTGGCCAAGTGCGCCCGCAGGGTCCTTGACGTGAACAAGCAGGAACGTCATATCCGCGGTGGTATGGCTACCCGGGAAAAATATCTGCACAAGGTGCAAAAATAACGAAAGAGACTCTTGTTTTGAGAAAAATATGGGCGTATA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCACCTTCGCGGTGACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.30,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : NA // Array 2 1662217-1661762 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP039126.1 Blautia producta strain DSM 2950 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= =================================== ================== 1662216 25 76.0 35 ....CA.A...........CTC... ACCTACCAAGTACCAACCGGTCTTCATGCCTCCGT A [1662205] 1662155 25 100.0 35 ......................... GCCCAGAGACAACCATCCCTGTGCCATAGCTCCAT G,GT [1662147,1662150] 1662092 25 100.0 35 ......................... GCCAGTCATCAGCCAACCTGTCTGCATTGCTCCGC 1662032 25 100.0 35 ......................... TTTCTGATTCAACCAGCCAACCTGCATTGCTCCGC 1661972 25 88.0 35 ......G..A...G........... GTTTACCAATGCCCAGCCTTGTGCCATAGCTCCGC T,GC [1661962,1661967] 1661909 25 76.0 35 ....AG.............A..ATT GCCCAGCAATAACCAGCCTGTCTGCATAGCCCCAC 1661849 24 80.0 35 .G......T.-...........A.T GCCAACTTTATACCAACCGGACTTCATCACACCGC A [1661842] 1661789 25 100.0 0 ......................... | G,GC [1661781,1661784] ========== ====== ====== ====== ========================= =================================== ================== 8 25 90.0 35 TTCCGTTCAGATAATACCAGGTTCC # Left flank : AGGTCCCCGCAGGAGTCAGCGTAATTGGATTACCTACAGAACAGGTAATTGACTTAACTGGTATAGTCCATCCATTACTGCCATCCTTTGCCAGAACAGTTATCTGACATTTTGTACGATTCACACGAAGTCTGTAAGGTCCGCCTACCATTCCACTTACATCCTGCTGTAAAGCTCCGCTTCCTGTAAAGTACATTTTATAACCCCTGATGTAATGCCATCCAGTTAACATGACACCATTTCCATCGAGATAATACCAATTTCCATTCCAAGCTACATATTCATTCTTAGCATAAGTACCGTTGCTCTTCTTAAAATAGTATGTGGATCCGCTCTTTTCCCAATTTCCAATGGTATTTACATTTACTGTACCATAACCTGGTATCCAACGTCCATTTTTATCAACATAATAGCCGCCAATTGTAGTATCTTTCAGCATGGCCCCGCTACTGCCCACATAATAGTAAGTATCGATCCAAGCATTTCGGGCCATAGCTCCG # Right flank : GTTTATCTTTGCCCAACCCTGAGCCATAGCCCCGTTGTCATTCAAATAGTACCAGTTATTTCCCAGTGCAAGCCAGCCAGTTTTCATATATCCGTTACCGTCAAAGTAATATTTCTGTCCTTTTACTGTATACCAGCAGTTTGCCGGCCAGCTTCCGTCTTCTTTCTGGTACCACCATCCGGTCGTATTCTGCTTCCATCCTTCCGGATAAACTTTATAAGATTTGGTACATTTACCATCTTTGTCAAAGAAATACCTTACCCCTTTTACAACAACAGATGTATTTTTCTTAACCGTGCCATCTTTATTCACGTAATACTTCTTACCATTGATGGTCTGCAGTCCGGTTTTGGCTGTCTGTTTTCCATCCGCACCAAAATAGTAAAACTTCTTACCGTCTGCTATCCATTTGGATTTGGCATAGCTTCCGTCTTCATTCATCCAGTAATTACTGCCGTTTATTTTCTGAAGACCTGTTTTGCCCTGTGTCTGCACACCGT # Questionable array : NO Score: 2.54 # Score Detail : 1:0, 2:0, 3:0, 4:0.43, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCCGTTCAGATAATACCAGGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 3 1903612-1907407 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP039126.1 Blautia producta strain DSM 2950 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 1903612 33 100.0 36 ................................. TTGGGGAGGTACAATACCAGGTACCGGATGAGGCAG 1903681 33 100.0 35 ................................. ATCAGCTTTTCCTTATCTGTCAATTGCTCAAACAT 1903749 33 100.0 35 ................................. CCGCGCTCTTATATTTTCTTCCCGTCGAATTGCTG 1903817 33 100.0 35 ................................. GGGAATACTACGGGATAGAAAACCCGAAGAATAAA 1903885 33 100.0 34 ................................. TCCGACACGCAGCAAATGTGGTGGATCAAATACA 1903952 33 100.0 34 ................................. TGGTCATGGCATCACCCCCATCCGCTCTGCGATG 1904019 33 100.0 33 ................................. TCCACTGCGATCGAGGAACTAAAGGACCTTGAT 1904085 33 100.0 35 ................................. AGAAAATGGAACACCATTTTCGTCATCGTCTAAGA 1904153 33 100.0 34 ................................. TCATCCAGCAGCTTCCCGATGGTTTTGGGCTTGA 1904220 33 100.0 34 ................................. TCCGCAGGGATACAAAGATCAAGATCAACCGTGC 1904287 33 100.0 34 ................................. CAGCAAGCTGGGAGATGATGGGAACCGTGTACTG 1904354 33 100.0 34 ................................. TTATCACTCCAATCTCAGGCGTATCCTCTCGTGC 1904421 33 100.0 34 ................................. TATAAGATCCGGCCCCAGCCAATCGGGGGGAACG 1904488 33 100.0 35 ................................. CTCATGGGAATCAGTGACCTGGAAGAAGCATGGTC 1904556 33 100.0 35 ................................. AGCGTGTCTAAAAATGGAGGAAAGCAGCCTATGGA 1904624 33 100.0 35 ................................. TGGCAGCCACGGGATGCACCGCAGGCAGTTATGTG 1904692 33 100.0 34 ................................. GATGTGATAGCGGCCAGGGACGGGGAAACGTTGG 1904759 33 100.0 34 ................................. GCAGGAAAGCGTTCAAGCCTGTTTTTCGCAGTTA 1904826 33 100.0 33 ................................. TTTATGGATTACAGCCAGAAGATGAAGGAAACG 1904892 33 100.0 34 ................................. TATAAAATCAACATATGTTCCAATATACGAATTT 1904959 33 100.0 34 ................................. CTTGGAAGAGTAGAAGGAGGTGGTGCGAAGATGT 1905026 33 100.0 35 ................................. TCCACTGCGATCGAGGAACTAAAGGACCTTGATAT 1905094 33 100.0 34 ................................. CGGCAGATTGGCCAGAATATTTGAAAGAAGGATT 1905161 33 100.0 34 ................................. CATGCAGGGATTTTCCCATTTACCACATACTTCC 1905228 33 100.0 34 ................................. ACTCCAATTGACAGGTGGCAGATAGACACCATAC 1905295 33 100.0 35 ................................. CTGGAAAAGAATGGATTTGATTACGCTGCAGTCAG 1905363 33 100.0 34 ................................. ATTTATCAGTGATGATTCGGGAGTGGCATGGTAT 1905430 33 100.0 34 ................................. CAAGGCGTGCCGGAGAGTTTGCCGCTATATTGGG 1905497 33 100.0 36 ................................. ACTTTTCAAAAGCTCATATATGAATAGTCTTCCTTT 1905566 33 100.0 34 ................................. CTCATATGACAGATTTAATGAATTAGCTAATGGG 1905633 33 100.0 34 ................................. AGTTTTATACTTACCTTACCCATTATTTTCCCCC 1905700 33 100.0 34 ................................. ATGGTATCAGTAATGTATTTCGCAAAGTTTACTG 1905767 33 100.0 34 ................................. CTCTGCACCCTGGCCGCTGCTCTTTCATCAGTCG 1905834 33 100.0 34 ................................. TGCTTCACCTCTCCGCATATGGTCTTCTTCTCCG 1905901 33 100.0 32 ................................. ACCCACCCGGCGGGGATGCGCCGGGAGAAAGG 1905966 33 100.0 33 ................................. ATGGATTGCAGGGATTTAGAAGATACTCTTTGC 1906032 33 100.0 33 ................................. GGTGTATTAGCGTTTTTAGCCAGGTGAAATTGG 1906098 33 100.0 34 ................................. AGAACATGGATTCTGGGTACACAAGATGCAGGAC 1906165 33 100.0 35 ................................. CTTGTCATCATCGTTTAAATGCCAATAGTCAATTA 1906233 33 97.0 34 .............................G... CCAGATATAAAACCGGATGATATTGAACCAAAAT 1906300 33 100.0 33 ................................. TACAGAAAGAAGATCAGGGAGATATATGGGTAG 1906366 33 100.0 35 ................................. CGTAATGGAGTAGATTGACGTCAAGAATTCCGAGG 1906434 33 100.0 33 ................................. CAGACAGTGATCCAGTTATTGGAACCTATCATA 1906500 33 100.0 37 ................................. CATGACACTAACCTGATAGACTTTCCAAAAGTCAAAC 1906570 33 100.0 35 ................................. GACTGGCGGACAGACGGGAAACATGTACCTATGGG 1906638 33 100.0 35 ................................. CAACAATATGAAAGTAGGAACTGACGATGTCATAA 1906706 33 100.0 34 ................................. AGCAGAGTCGCACCTTTATCTATGCTGGCTAACG 1906773 33 100.0 33 ................................. TCCAAACCCTGCAAAAGCATGGACTTTATTACC 1906839 33 100.0 34 ................................. TTACGCACTAGGCGGCACGCAGGCCACTGGAAAA 1906906 33 100.0 34 ................................. GTCTACGGCGTAGGCTCCATGCTTTCTAATCGCC 1906973 33 100.0 33 ................................. TGGGAGGACATAAGGACGTGGAAAAATGACAGT 1907039 33 100.0 36 ................................. AGGGTTGTGTAAAGGTGTGATCCGGATGGTGTTACA 1907108 33 100.0 33 ................................. ATTTAAAATTTCATTATGGTACAGCTCTAACTG 1907174 33 100.0 33 ................................. TCCAGTACCTTGTCAATGGCATCCTCGATGTCA 1907240 33 100.0 34 ................................. TGCGAAAGGTAGGAAACACCTTGAAAGACTCAGT 1907307 33 100.0 35 ................................. AGTTCCTCGTCTGGGTCTTCCACAAAGGGTATCTG 1907375 33 97.0 0 ..................G.............. | ========== ====== ====== ====== ================================= ===================================== ================== 57 33 99.9 34 GTCACTCTCTGCGAGGAGAGTGTGGATTGAAAT # Left flank : CAGCGGAGGAAGCCAGAAAGGAACCTCTTCCGCAAAAACCGGAGATGAAACGCCTATCGGTATGTTTGCAGGCTTTGGAGCTGTGGCACTGATCGCTATCTTTGCTTGTACACTCAGCATTTTGAGGAAAAGAAAAAAATATAATTAATTTTAACAATTTACAGCAAATAGCTTCACTTATTATTTTACATACTCCCGGCAGAAGATTTTTTTCTGCCGGGAGTATGAGACAGAGATAAAAGACTCTGTTGAATTGGAAAATATTTTTGATATTTGGAATAAAAATATCAGCAAGCAAAAGAATACTCCGCACATTTGTGCAGGGTATTCTTTTTTTGCAGTGCGAATGTCAAGTGAACATGAAATACCAGGGGGATTCGCACCTATATTTTATTGGAAAAAATATGATATATGTGTTAGAATAAAAAATAGATATATAGAATATGTGATAAGTGTGCAAAATTCCTATGGATAATATGGAACATTTGGGAGATTTTGCT # Right flank : TTCCCGAAGTGAGAGGATTTAAGCATAAGTTCCCAGACAATTCTCATATAGTCATATGCGCCAATCTTCACAATCAGGGGAAAAATGTATATATACTACTTCAGTCCATTCCTTTTAACATCAAGCAATATTTTCAACAATATTTTACACTCAAAATTTCTTATACTGAAAAATGCAAATTTACATATTGCTTTATAACAAATCCATTGACACAAATAGAAAATCTAACTATAATAATGGCACAGCAACCCAATAATTTATATACAGCGTTAGTCCATGGCTGACGCTGTTTTCTATACAGGTACCTTGTTAAGGATATGACCAGCTCTGCATCTGCTGCTGTTTTTTAGTCATAAACAGTCTCAGTTGAACTGCTGACATGCTGCGTGCTGCTGCATCAAACTGCGAAAAATAGTAAAATCAGCGCAGTATAGTTGAGCATTCCACATCGTACCTGACACAGGTTTTGCGTCTGGGCGCGGACAAATAAAACTGTTGGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCTGCGAGGAGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: F [matched GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.60,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 3553163-3550876 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP039126.1 Blautia producta strain DSM 2950 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 3553162 32 100.0 35 ................................ CGTTGTCGTAGGCGATATCCGTTATATTGACCGTA 3553095 32 100.0 34 ................................ CGAAGGAAATGCAGAAACCTGCAAAGAAAGCCCT 3553029 32 100.0 34 ................................ TCTCTGATAAGCCTTTGTCTTTCAGCCCTGTCTT 3552963 32 100.0 34 ................................ GTATGTGTCATAATCACATACATAGTATCTTTTC 3552897 32 100.0 35 ................................ GGTGCGGTGATGGGGCGTGAGCAGTTTGAAACAGA 3552830 32 100.0 35 ................................ GACTATGCTGCAGTTAGCAAGAAGTGGGCTGAAAA 3552763 32 100.0 35 ................................ CATTTATGTAAAGAAGATTACCAGGAGATCAAACA 3552696 32 100.0 34 ................................ TCGACGGAAAAATCCTTAAAATGCTTCCGGGCCA 3552630 32 100.0 34 ................................ CATTATCATATGTCTGAGAATTGTACGCCGGGGT 3552564 32 100.0 35 ................................ CATCAAGAACGGAGTTGTTACGGCAAGTGGGACTC 3552497 32 100.0 33 ................................ TTATATGAAGGAAAAGTTATGGTCGACCCCGTG 3552432 32 100.0 35 ................................ CGCCATTGTTGATGTGCTGAGTGATATCGGTATTG 3552365 32 100.0 35 ................................ ATATGCTCTGACCCTATAGCCCGAATAGCACATAA 3552298 32 100.0 36 ................................ ACCCACCCGGCGGGGATGCGCCGGGAGAAAGGAAAA 3552230 32 100.0 33 ................................ TATATTATTCATTTCTGTATCCCCCTTGTAATC 3552165 32 100.0 34 ................................ CGTTTACGATTGTATGGCCGGAGAAACCAGCGGA 3552099 32 100.0 34 ................................ CGTTCAATCTCTGCATAGACGGAAGTGCCAGAGG 3552033 32 100.0 35 ................................ ATAATTATTGTCCAGATGTTGAAACGTATACATAA 3551966 32 100.0 36 ................................ CGTAAGAGAGATGAGGACGAAGGATTAAAAGAAATG 3551898 32 100.0 34 ................................ CGTAAGAGAGATGAGGACGAAGGATTAAAAGAAA 3551832 32 100.0 34 ................................ ACAGATAGCGAATAGAAATGAAGAAGAACTGATT 3551766 32 100.0 35 ................................ GACAAGGCATGGAAAGAAAATTACCGGACAAAGGG 3551699 32 100.0 34 ................................ ACTCGATGGGGGTACTACGTGGGCAGTAGACAAA 3551633 32 100.0 34 ................................ AACAAAGATTGGAAAAACTTTGGCAGTAGCACTT 3551567 32 100.0 34 ................................ GAAATATATGAGAGATTTGATTATAGATTGCTTC 3551501 32 100.0 35 ................................ TGTCAGCTTATTTAAAAACCGCCCAAACTCTTCTT 3551434 32 100.0 33 ................................ TTGAAGATTGTAAAAAAGTTGCACAGAAGTATC 3551369 32 100.0 34 ................................ TACAAAGGTATATGTTTTGTTTAACTGTTCGTTT 3551303 32 100.0 35 ................................ TCTTGATAAGCTGATATAGACCTACAACAGCAAAT 3551236 32 100.0 34 ................................ GTCCGTGGAAATCAGGGTGGATTCCAGATGATTT 3551170 32 100.0 34 ................................ AGTGGATATCAAGACAGTTGATATACCATATCAG 3551104 32 100.0 33 ................................ AATTCCGGTTTGTGGAGTATATGAAAACACAGA 3551039 32 100.0 34 ................................ AATCAGTTCTTTGAGCACGGAGTTCCTGGTTGGG 3550973 32 100.0 34 ................................ CAGCAACAGCAGTTTACGTTCCCCATTGACACCT 3550907 32 84.4 0 ...............A....A.C.G......G | ========== ====== ====== ====== ================================ ==================================== ================== 35 32 99.6 34 GTCACTTCCCTTGCGGAAGTGTGGATTGAAAT # Left flank : TTGTGCCGATTCTGGAAGCTGGTAAATTTTTGCGTGTTGGCAAGGGGGCTACAATCGGCTTTGGACACTATGAAATTTCTTATGATAAATAGAGGAAAGAATGAAAGGATAGTTTAAAATTGTAGTTTACGTATTTAAATAAAGTATATTTGGAAATTGCTTATTTATCATTTTTAAGCAGAATAGAATGAGTCTAAATTATCAGCCCATTATTCGGTGGTGTTTCCATGGACTTCAATAAGGACTTCATAATTGCGGTAGTTCATATTGAAGGTAATAGGATAGGGACTCGGAGTTATAAGAGTTTTATAAATGTCAGGTGCGAATATGGAGTGAACATAGTTTTCCAGGGAGACTCGCACCTGAAAAAAGTATAAAAATGTGTAGTTATGGCTAATTTATGGATTATATTTCAACTTAAGGTTGCATTTTTTAGAGAAAAAGGTTAGAATTTAGTGGAAAGATACAATATTTATATAGTGATATTGTGCATTTTTGCT # Right flank : AAGTAAAGAGGATACTATATATCTATTTGAACGTTCTAACCATATAAACTCAAAAATTTACATTACAAAAATTAAATAGAATATTTCCGGACATTCAAAGCAGCTTCCTTTACAGAGTCACAGTTTCATAGCCCTATTCTATTGGCACGCAATTTACTATAAAAAGCTGAATTTAAAAACCTACACATGTAAAACTATAAAAATAAATTACCAAAGGGAAGTTAAAATGGTGATTGCCACAAGAAATGATATTTTCACAAAAATTCATGAGCATAGAAATCAATACGAACATTACCCTGGGTAAGACAAGGAATCTTCACCCTATTCTGCAGAAAAAAATACTCCTTTTTGATAAGGATCACCATACTGGATTCTTACCGAAAAGGAGTTATTTATACCCCAAAGCTTAACAGCTCTGTCATCACACATTCGGTTATAACAAACTATGTATTCAAACTGTCAAAAACCAAAACCGCATCAGTGATTCCACCTGCCTAAAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTTCCCTTGCGGAAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.50,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 5 3789865-3789568 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP039126.1 Blautia producta strain DSM 2950 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 3789864 32 100.0 35 ................................ TCCAAACGGACTGGCCGACCTGTGGGCACAGGTGT 3789797 32 100.0 34 ................................ GATAAAGAAGGATGGATGGTGACGGGCTGGATTG 3789731 32 100.0 35 ................................ TGAGAGAGGTAGCTCCATAATTTCTTTGCCATTAT 3789664 32 93.8 33 .....C.................G........ TTTGACGGATTTCACAAAGTTCTCAGGGGCCTT 3789599 32 84.4 0 ......A......C..T..G...G........ | ========== ====== ====== ====== ================================ =================================== ================== 5 32 95.6 34 GTCTCTGGCTTTGTGCCGGAGTGAATTGAAAT # Left flank : CATATGGGGATGATAATGGGATTTATAACAGCGGAGACAGGCATGTGGCCTAGAGTGTGTTTGAAAATTCATTCCGACAATCTGCACGCCCCACTTTGCGGTATATTTCCCCCCAATTCGGTCAACGTAGCCCGCTACGCCTCCCTCATCAGGGTCAAAGACGCACAGCTTGCCGAAAGCAATTTTTAAACACACTCTAGAGTCCTGGGACTAGAAGGAGAATTCCCGGACGGGGAATATCAAAAATATTTTTGAGAAGAGTATCCTTTGGGGTGGGAATAGGAGAAAATGTTTCTGGAATAATTGAAGGGAGGGTGTTATAATAAAACAATACAGGGTAGTGCGAAAGGTAAGTGAACATAAATATATGGAGGGATTCGCACTGATAAAAGAATGGTTTGTGATTTGTTTTGGTAATGGGATTAGGGGATGTAAGTGGAAAATTGGATATTTTGTATAAAAATGGTGATTAATAATGGGGTTGTTTGGATAAAATTGCT # Right flank : CTGCTGAAGCTGGGGAAAAACATTTTCAGCCAAGTCTCCAGTTTCGCACTGGAGTATAAGCACAAAAATCACTACAAGCACAAAACACAGGAGATACCCATATGATATACCTGGAAACAGAACGTCTCATCTTACGGGATTACACGGAGAACGATGCAGAAGAGTACAGCAGACTTATGGCTGATGATCAGGTGATGTATTATCTTCGGGATATTCAACACCATTCCAGAGAGGAATCGGAAGAGGATTTTAGAAATATCCTTCTGGATATGCGGGAGAAGGACAGGCAAAGATATTTTCTTCATATACAGAAAAGGGATACAGGAGAACAGATTGGAAGCATTGGTTATACGGTCACGGATACAACTCCGGCAGGAAAACTGGTGCATCTGGGATATTTTACATATCCGAAATACTGGGGCTGCGGTTATGTGACAGAGGCGCTTGAAAAGGTAATGGAATTTGCTTTTTCCCAGGACGGTGTATACCGCATCACCACC # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:0, 3:3, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCTGGCTTTGTGCCGGAGTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 6 5677457-5674392 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP039126.1 Blautia producta strain DSM 2950 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 5677456 32 100.0 35 ................................ AACTCTTTCTCGGTCATAGATGGGCTTTACCTCCT 5677389 32 100.0 34 ................................ TTCGATTTCTTCAGCCGTATACGGGAAACGGCTG 5677323 32 100.0 34 ................................ TGCTCTGGCTGTTTGTTCCAGCAAGCTGGGAGAT 5677257 32 100.0 34 ................................ CCTCGGGCGATTTCTTCAAAGAAGGTACATATCT 5677191 32 100.0 33 ................................ CCATGACCCATGCTGTAACCAGTTGGTCAATGC 5677126 32 100.0 36 ................................ CTGGAAAGGGAGATTCCTGCGGACTGGGATAGTTAC 5677058 32 100.0 34 ................................ CTAAATAAGACAATGTTCAAGAAATGGATAAAAG 5676992 32 100.0 33 ................................ CGGAGGGAAGCTTATACCGTGCTAGAAGTGTAT 5676927 32 100.0 33 ................................ TATTTGCTTAGCATAGAAGCAATTTATAAGTAC 5676862 32 100.0 33 ................................ TCATAAGATGAAAGTATGTTTCTGATCACATCT 5676797 32 100.0 33 ................................ TCTTGTCATGACTCCTCCTTACTCCTGAACGCA 5676732 32 100.0 35 ................................ ATTTGCACTGGATGTATATACAGTTGTCCATGTTG 5676665 32 100.0 35 ................................ TTTAGCTCGCCATTATCTCTGTAAGCCATCATTTT 5676598 32 100.0 35 ................................ TTGGTTATATAATCGACAATGAAGTTATATACATC 5676531 32 100.0 34 ................................ ACCGGAACCTCACCACCCTCCCTGAGCCTACTTT 5676465 32 100.0 34 ................................ ACCGGCCAGGTGCTGGAACTGCAGTGCGGACCCT 5676399 32 100.0 34 ................................ CTGGGGTACTTTATGGAAATACCAGACGGTACAT 5676333 32 100.0 33 ................................ CCCCTGCCACCAATAATGATTACCTGGGTTTTC 5676268 32 100.0 34 ................................ TTTTGGAATCCGTCCGATACTGGTATCTTAATCC 5676202 32 100.0 33 ................................ CTTCAGCCTGGCAAAAGAGGGGCTGGACATCCC 5676137 32 100.0 33 ................................ CTCAATCGCAGTGGAGAATATAGGCAGTCCCAG 5676072 32 100.0 34 ................................ AAACCTGTGATACTCCAACCTGGTATAATACCTA 5676006 32 100.0 34 ................................ CGTATGTTTTCTATTCCTTATATCACGGATAATT 5675940 32 100.0 33 ................................ GCTGATAATTACATAGAAAATGGCGGCAATATG 5675875 32 100.0 33 ................................ CGCAAGCCATGCCTTGAATGCCTCTACGGTTGA 5675810 32 100.0 34 ................................ TGCACGATGATTTTGTTGTGAAAGCTAAGCCTGA 5675744 32 100.0 34 ................................ TGACTGGATAAAACTGAAATCGGGAGTGGATAGA 5675678 32 100.0 33 ................................ TGGGCAGACGTCTTTATCACCTCAAACGCTTCT 5675613 32 100.0 34 ................................ CCGGTATAATCTCTGTACATCCAGGACAATATCA 5675547 32 100.0 35 ................................ CTTTGCACCGAATCCCTGTATTGCTTTTCCTTTTT 5675480 32 100.0 34 ................................ AAAAGCATTTGAGTCTGCGCCATCAGTTTCGTTA 5675414 32 100.0 33 ................................ CTTTTGGTAATGCAGTTTAATATGATGAGCATT 5675349 32 100.0 35 ................................ CTACATAGATACCGACGTGTGTTACATAACTTCCT 5675282 32 100.0 33 ................................ GCATCTATCGTGCTGTCCGGCGCTATCTCCATT 5675217 32 100.0 37 ................................ GTTCTATCGTACATGGGAATCACCTCACATCACATCA 5675148 32 100.0 33 ................................ TGGACTGATGAATGCCATTAATAATATTGAGAT 5675083 32 100.0 35 ................................ AGCACACCATCTTGATTATTGTCACCGCCTAGTTT 5675016 32 100.0 35 ................................ TTTGTGGATGTCTTACGCCTGTGACCTTGAATCCT 5674949 32 100.0 33 ................................ CGTTATCTGAGATGACCCACAGAGAAGGGACGG 5674884 32 100.0 34 ................................ CGAAAATCCATGAGTAGACTCTCGGGGTGGATGA 5674818 32 100.0 34 ................................ TCCATCCACCCAGAATATTGTTGTACAAATCATT 5674752 32 100.0 35 ................................ ACTCAATTGGGAAAGAAGTTCCAGACTCAGGTGGG 5674685 32 100.0 34 ................................ ATAATTTGTCCGGTATTGCCGGATATCTGTGGAT 5674619 32 87.5 34 ....T.........A.......A........C TTGACAAAGATTGCGTATACAGAGTATTATCAAA 5674553 32 96.9 33 ....T........................... CACGCACTACGTGGAATACTGTAATTAAGATAA 5674488 32 81.2 33 ...CT........TA....C...A........ AAAACCTGCCGCAGATGCAGAATCGTTATCCGT 5674423 32 84.4 0 ....TT.....TA.A................. | ========== ====== ====== ====== ================================ ===================================== ================== 47 32 98.9 34 GTCACCACCTTCGCGGTGGTGTGGATTGAAAT # Left flank : CAGTGTGTTTCGCTGAAAGCTGTGTTGGGAGATATTATTGATAAAGAAGTTGACAGCCTGAGGTTCTATTACCTGGGAAATAATTATAAGACGAAGGTTGAACATATGGGGGTTGATAGGGGAACTGCGGCTGATTCCACTTTGATTTTTTAGTGTTTATCTGTGAATTGTTTTTGGCAGACTGTGCATTAAAATTTATGAGGATTTGCTTCTGATGAAGAAAAAGGAAATTCGGTGGCTCGGGCTGTATCAACTGAATTGGAGGCAAATCTTCTGCAAAATGGAGTGTACAGTTTGTCGGAATGAATTTTAGGACAAACACATTTTAGTGCGAATAGGAAGTGAACAGAAAAACATTAAGGGATTCGCACCGAAATTCGGAGAGGACATGGTTGGATATGGGGGTGATATATGCGAATGGTTTAGCATGGATGGTAAAAAATAATTAATGTTTGGGCATGTTGTATAAAAATTTATGGTTAAATTTGTGGTTTTTTGCT # Right flank : GCAATGCAATACTTTAACCCTTTTCTGTGTTTGCCAAGTTTTACCTTCGCAATAGTGCATGATGAAGTCGTCGAAATTTAAGACTGAAGTATCACTACCCTTACAAAGGTGTGAATGAAAATTATATTCAGTCAAATGTTCTTATACTGCATCAGTGAGCAGTAAAGTGAGTCATGGGAAAGATGACTAAGTGAACATGGCTTTTCAGAAAGGGGTGTGCAGAAGAGATGAATGAAAATATTAAAAAGAAACTTCCAATTGGAATAGAGAGTTTTGATAAAATCCGTATAGAAGATTTCTATTATATTGATAAAACTGGGCTCATTAAAGAACTTTTATATAATTGGGGAGAAGTTAACCTCTTTACACGCCCAAGGCGTTTTGGAAAATCTCTTAATATGAGTATGTTGAAAAGTTTTTTTGAAATAACCACCGATAAAGAGTACAAAGAAAATCTGTTTGATGGGTTGGAAATTTCAGATGATAGAGATTTATGTAAG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACCTTCGCGGTGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-4.90,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 7 5912275-5912568 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP039126.1 Blautia producta strain DSM 2950 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 5912275 32 100.0 33 ................................ ATCCGCACTGGATGTATATACAGTTGTCCATGT 5912340 32 100.0 33 ................................ TGTAGGCGGAGATACAACAGGAGTGCAGGCCCC 5912405 32 100.0 34 ................................ AAATCTTTCATTAATAGATTCCATGATTCACCTT 5912471 32 93.8 35 ........C...G................... AGTAAAAAATCACCCTGCGACCGCCAAGTTTTAGA 5912538 31 78.1 0 ........C...G..A.-..AC....T..... | ========== ====== ====== ====== ================================ =================================== ================== 5 32 94.4 34 GTCACCACATTCTCGGTGGTGTGGATCGAAAT # Left flank : TTGCACATTTATTAATTATCACTTATACTATACATAGATAGGAACAACCGCCCACAAGGTGGGTTGACCTGTATATGGCAGAAAACCACCCTTCCAACGGCCAAGTTTTGGGGGTGGTTTTTTATGTATAGCTACTTACAGAACGTAAAAACGAATGTAAGGAGCGCCAAAAGGAAAAGACCAAAGGTCATTAAATCCTTAAAATCAAAATAATTTTTCATTGGCATCACCTCCATTCCGATAGAATGAAGGCCAATCCACCCGGCAACACGATTGTTCCATTTTTATATATTAACACATATATTTTTAATCACAATATTAAGTGCGAACATGAAGCTCACAGATGTATTCCAGGTGATTCGCACTAATCTTTTTATTAATTTATGAACAATCAAACAGTATCCCTTAATATTTCTTATGTTTTTTTAAAGAACTTGATGTATTATGTTATAAATGTTATATTTCATAAGTATTAGTAATTTATTTTTGTCAAATTTGCC # Right flank : TAAAAAAGAATCGCCACAAGCTTTGCTTATGTCGATTCTTTTTTATTTAGGTTAATCCGTAAGTGTCCCGAATTGTGCTCATCTGGCTATCCAGCCAGATGAGCATATCCCATTCAATGCTCTGCTCCAGCATTTTAAGGCCGTCAAGGTATCCATATACGTCCTCCAACAGATTATCCAGGGACAGGAGTTTTTCTTCCAGTTCCGGTATCTGCTCAATCGCGCCAGCATATCTTTTACAATATTGATAAATTTGGACCTTCCATGAGATCTCACTGCTCAGACGGAAGATCTCCTCCGGCCCGCGCAGGAGATATCCCTGTTTCATCCGCTCATAATCTTCCTCCAGTTTTTTCTCCAGTCTCATCCCTTATTCCCCGCTATTCCTTTTTGGTCTTATCAATTCCTTTTTTGCAAAAACAGGGAGGTTCCAGGTGGAACCTCCCTGTTCTGGGCATAAAAAAGTCCGGAACTCTGTCCGGTCTCTCTTTTTATCAGTT # Questionable array : NO Score: 2.78 # Score Detail : 1:0, 2:0, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACATTCTCGGTGGTGTGGATCGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.30,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //