Array 1 225400-222372 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADZHG010000020.1 Shewanella algae strain 669801 669801_20, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 225399 28 100.0 32 ............................ TGATATCAATTTGTCGCCCTGGAACACTATTA 225339 28 100.0 32 ............................ TGAGCCGCAACCATTCGATGCTTGCAAAACTC 225279 28 100.0 32 ............................ ATTAGATGCACTCCTCTACGAACTGCTGAAAC 225219 28 100.0 32 ............................ ACCCCTGAGGACGTTGCGAGAGCTTCACTGAG 225159 28 100.0 32 ............................ ATTCATCCGGGATAATTGGCAGTTCATCAACA 225099 28 100.0 32 ............................ TTTACCCACTCAAGCAGCGACTTTGGCAATAT 225039 28 100.0 32 ............................ TTTTCGCGCTCGGCGTAACCGGCACGCGCCAT 224979 28 100.0 32 ............................ TTTACCCACTCAAGCAGCGACTTTGGCAATAT 224919 28 100.0 32 ............................ TTGTGTGCCGGGTAATTCTTGAGGATGTTGTA 224859 28 100.0 32 ............................ GACACATCGGGGTTTGCCATGCTTGACCAATT 224799 28 100.0 32 ............................ GCCATGGTGGGTACATGCCATGCTTGGTAAGG 224739 28 100.0 32 ............................ CTCGCGGTCAGGGTCGCCAGCATTCACAATTT 224679 28 100.0 32 ............................ AGCAGGCGAAGGACAGCCAGCAGGCAGAGCCA 224619 28 100.0 32 ............................ TCAGACTCGCCTTTGTTGTATCCGCAAGGCAT 224559 28 100.0 32 ............................ ACCGGAGAAATGCACGGGGCATTTGATGATGG 224499 28 100.0 32 ............................ GCATTCTGAGTGCAAGTCTATGTCAAACGCCT 224439 28 100.0 32 ............................ ACACCCTTGAACTGGATTTCCAGACCGTCGCC 224379 28 100.0 32 ............................ TGCTGACGGACTGTCAAAGCCACAACGAATCT 224319 28 100.0 32 ............................ TTTAGAAGTGCTGCCGATGTACCTGGGTACCC 224259 28 100.0 32 ............................ AGCATCATCCGTTATTTCGTCGCTACGGAAGG 224199 28 100.0 32 ............................ CTGATTAGTCAGTTCGGCCACAGTTGCTATTC 224139 28 100.0 32 ............................ ATACGCAGCGTTACCGCTCGCTGGTCGTCCCC 224079 28 100.0 32 ............................ TACAACCGGTTCACGCTGGACGATTGACTCAC 224019 28 100.0 32 ............................ CGTTACCGGGTCAATGGCGCGTACTGTCATGG 223959 28 100.0 32 ............................ AAAACTCGAAGCCGGCGATTGATTTTTGATAT 223899 28 100.0 32 ............................ AGCGCCCGTTCACACATACAAATGCGCACAAT 223839 28 100.0 32 ............................ TAGCCTCGGCAAAGGGGATTTGGTAGAAACAA 223779 28 100.0 32 ............................ ATCAGCAGTTACGCAGTTGATGACTTGGATTT 223719 28 100.0 32 ............................ TGCCGGGCCACGGTGTAGAAAACGTGCGCCGC 223659 28 100.0 32 ............................ TCACAGAGCGCAATGTCCACGTTACTGATGGA 223599 28 100.0 32 ............................ GTAACCCAATCCCGGCTTTCCTTGCTGGCGTG 223539 28 100.0 32 ............................ AATTTGATTTGTTGCATCTGGTATGCCGTCTG 223479 28 100.0 32 ............................ AACGAGGATGTGACAACTGGAGCTGGTGAAAC 223419 28 100.0 32 ............................ TCAAATGTTATAAACTGCGCCACGGCCACAAT 223359 28 100.0 32 ............................ ACTAAGTGGGGTTTTGCTTTTAGAACAAACCT 223299 28 100.0 32 ............................ ATTTTGGGGCAATCAAACCGCGCCATCCGCTT 223239 28 100.0 32 ............................ GAAACCTGAAAAGGAGAAAAGCGACAATGAGA 223179 28 100.0 32 ............................ ATATCAGGAAAAAGGTAGTCAACAGGCCACTC 223119 28 100.0 32 ............................ AACCATAAATAACATAGCTTCTCCTCAGAATC 223059 28 100.0 32 ............................ TTATGATTATTGTTGACAGTGTAGCAATATGC 222999 28 100.0 32 ............................ GTAACGCTTAAATACTTCGGTAACTGCAAGCT 222939 28 100.0 32 ............................ AACTCCCTGTTTTCCATTGACGTTATTCTTCG 222879 28 100.0 32 ............................ TATTGGGTACCTAGCTGCTGATGGTCTTTGCT 222819 28 100.0 32 ............................ GTAACGCTTAAATACTTCGGTAACTGCAAGCT 222759 28 100.0 32 ............................ AACTCCCTGTTTTCCATTGACGTTATTCTTCG 222699 28 100.0 32 ............................ AGAGCAGAAGCCGGAAAATTCCGGCGGCAAAA 222639 28 100.0 32 ............................ TCGACTCCATCCCTACTATGGTGCCTACCGCA 222579 28 100.0 32 ............................ TCACGAACGGTATTAATTGCAGCATAAAGCGA 222519 28 100.0 32 ............................ ATTTTGGAGCCAAGCCATGGAACCAGACAGCA 222459 28 89.3 32 .............T..AT.......... AGCGAGGGATTTTAAATCCCTTTTTCAATACA 222399 28 92.9 0 ............T........G...... | ========== ====== ====== ====== ============================ ================================ ================== 51 28 99.7 32 GTTCACTGCCGCCCAGGCAGCTTAGAAA # Left flank : CGAGTGATGTTTCCTACGTGAGCTTTGTACGCAAACAGGTGAAATCGCCTGAGCGGATTGAGCGGGCTATGCAGCAAAAGGCGGCATTATGGGCGGCAAAGTCGGGCAAGCCGCTGGCCGAGTGCTTAACCGATCTTGCAAAAAGCAAACCGACTGGGCAGTGTGATTTGCCATTTATCTTCTTGCACAGCCAGCAAACGAAACAACGTTCGCCGGACAAAAACAGCAAGTTCCCGCTGTTTATCGAAAGATATCCGCAAAGTACACCTGTGGATGGGCCGTTCGATTGCTACGGGTTGAGTCGTAAAGTTAATGGTATTGCATCGCTTGGAACAGTACCGCACTTTTAAGCATCAAAGGGTGAGTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTATATACAATCAGTTACAAAAGGTGGTGTTCAACAGGGTAAAAATAGGTTTTTTATCCTAACCACCTGTTGTGACTTTCTTTTATTGCTTTATTCTATT # Right flank : GGTTTTCTGGTGAATTACCCTTGAACCTTGCCGTGCTCCCTCCACAACGGGGATTTATCACTCGGCCCCAGCAAAATCCGAACGTCCTGCATTTGTGGGGCTGAAGAGGCCGAAACTGAGGAGATCTAAATAGCGGCCCGGCTCAAGGCAGCATATCTACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGATAACTGGAAGCGTCCGGCTCTGGGTGGGCGCCATTCCAGGGTTTGTCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCGATGTGCTCATTGGCCACGCTTTGGCGCAGGCTGTAGGTGACGCCTTTCAAGGGAGAGCGGATAAGCGGGGCCGAGTAGCTGACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCCCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //