Array 1 133102-137011 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016476.1 Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================= ================== 133102 35 88.9 37 C...-.........A........A............ ACCCCTCCCACCAGGGCGAGATTGGATTGTTCACCAT 133174 36 100.0 41 .................................... TTGAAGCAACCAAGTAAGACCTAATCTGATTCCCGCTTCCT 133251 36 100.0 40 .................................... TGTTGGCATTCGCTGCTACCGTCAATGTGACGTAAAAGCG 133327 36 100.0 37 .................................... CTCCTGGGTGTCGCTGATCGAGAACCGGAACCTCCTG 133400 36 100.0 36 .................................... AATTTTAACCATGTTTAACTTCAAAAATCTCTTTTC 133472 36 100.0 35 .................................... AAACCTAGATTAGTCCGTCAATCTGTCGGTGCAGC 133543 36 100.0 38 .................................... CACTTTACATGGTCCGCCGTGACATTTTTCATCTTTGG 133617 36 100.0 38 .................................... ATGACCGTTTACAAACCAATTGAACTTGGAGGTTCAAA 133691 36 100.0 36 .................................... CTTCAATAACGAAGTTGATGAGATCATCATTGAGGG 133763 36 100.0 40 .................................... ATCGACATTGCTATATTTCCCGCCTACTGACTGGGATGGT 133839 36 100.0 41 .................................... AGAAAAAGAAATGGAAATGGAGAAAGGGCTGCAAGGGCGTA 133916 36 100.0 36 .................................... GTAACACACTACAAACAAACAAGGAATTAAAACAAT 133988 36 100.0 39 .................................... AACCATGAGGATGTGAACTCTGCCCATTTCGACCACCAC 134063 36 100.0 36 .................................... CTTTTGGAGTCGCTGCGGAACTTTACCAGACATTAG 134135 36 100.0 41 .................................... ATTTAGAAAGTGATCAAATGTTCCAAATGCTGCTCATCAAA 134212 36 100.0 39 .................................... ATTAGCGTCAAGACAGTTGGAGTTTATGTTGTCGTTAGC 134287 36 100.0 37 .................................... TGATTATCGCTGCTATTTACGACGGCAAGCGTACCGA 134360 36 100.0 37 .................................... AGAGGGGTTAACCTTTAAGACTATCATTGTCAACAGC 134433 36 100.0 36 .................................... TCTGGTCATAAAATCTCTCTCTATGGGGAGAATCAG 134505 36 100.0 41 .................................... TTGGAGGGCTTATTAATTAACCGTCTCGAAGAGGTACATCA 134582 36 100.0 37 .................................... AAGGTTCACAAGGCTTCATTCCACAAACACTTGTGGA 134655 36 100.0 38 .................................... CACGAAGCTGCTGCTCCTGACGGACAAGGTCAAGGAGG 134729 36 100.0 41 .................................... GAGGTGTCTTATGAAGCCAGTTGGAAAGAAGAAGAGAGCGA 134806 36 100.0 37 .................................... AGATGATGGAGGACATCATGACTAAAGCGGCTGAACA 134879 36 100.0 40 .................................... AGAAGCAGGGTCGTACCATCCGCTCCGAAGCGGCAAAAGC 134955 36 100.0 38 .................................... TCAAACCAGAGGGGATGTTTGATGTCACGGTGCAATTT 135029 36 100.0 34 .................................... GTGACCGGAGTATATGTACCCTCCCTTCTCTTCA 135099 36 100.0 38 .................................... CTGATGCTTTCCTGCAGTTACTGCTGGTCTTACGCACT 135173 36 100.0 36 .................................... GTCGAACTGATCCAACTTCTTCAGCACAATAGAGTG 135245 36 100.0 41 .................................... CCTCTTTCTGTAGCTTCACTAACAAACTGGGTTGAACACCA 135322 36 100.0 49 .................................... TCGCTATGACTGGGCCATGGGAATGCTCAATATTGCCATGGACACCCTG 135407 36 100.0 38 .................................... GCAAGACACCTTGGAGTGCTGGAAGTGGTTGCGTAACA 135481 36 100.0 36 .................................... TAATCGACCTTTAAAGATGTCATACAGCTTAGACCA 135553 36 100.0 38 .................................... TTTGGAGGGGAAACCTCGAGTACGGGATCTCTTCCAAT 135627 36 100.0 39 .................................... TGTAAACAAGATTAGCGGTACTCCTACAAAAAGGGCTGT 135702 36 100.0 37 .................................... CGTCAACGCCAAAGCTCGCAAGCAATGGCGCAAGGGC 135775 36 100.0 42 .................................... CAACTTGCCAGATTGAGATTTGAGAGCCTGTGCTTCCTCCAG 135853 36 100.0 39 .................................... GCCTTCACAATATAGGGCGACTTGCCGAAGAAGAGTATG 135928 36 100.0 39 .................................... GAAGGACTTTGACAAAACCCTTCGTACTGATGAAGGGTT 136003 36 100.0 44 .................................... TCAAGGAGTTAGCCGTTTCCCGGAAACGGGTGCAGGATGCTATG 136083 36 100.0 40 .................................... ATGAGATCTTTAAGCGATAATTGAAGAAGGCTGTGTCAGC 136159 36 100.0 37 .................................... GAGATGTTAGAAGCAGCAACCGAGGACATGGAGTCTG 136232 36 100.0 38 .................................... TCGGTGAGTGTAGCGTTCAAAAGATTCAGTGTGGGGAT 136306 36 100.0 39 .................................... GGCCGCTAAGAACGCATCTGAGCTTAAAACCTTGGAAAA 136381 36 100.0 36 .................................... AAGTTGCGCGACAACCCCAACGTCATTGCCTATATC 136453 36 100.0 39 .................................... GCCTGGGTATTTTGTCATGACTGTTTACCAAGATGCAAT 136528 36 100.0 43 .................................... CTAAGCTGCTTGCTCTGGCAACCAAGTGGGCTAAGTCCCACAA 136607 36 100.0 39 .................................... GGGGGAATCAGGTTATTTACGACGGCGTTTCTTCATGGT 136682 36 100.0 39 .................................... TTGTCTACGATGACCCGGAAGACCCTATCGAGGAGGATG 136757 36 100.0 36 .................................... TTGTTTATAGTGGGTTTAATAATATGTTCGGTTTTA 136829 36 100.0 38 .................................... CCCTTTTTTTAGGAGCATCGCTAATTTGTATACTTTAA 136903 36 100.0 37 .................................... ACCTCATGGAACAGACTGAGGATATGGAGTCCGTCAG 136976 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================================= ================== 53 36 99.8 39 GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC # Left flank : TCTTGGCGGTACCACCAGGCGAGATCATCTTTAAATTCTGGGCTGAAAACTGGTTGAAATAAGCGTTTTTCTACTTTTTTTATCGCGTCTTTAGGTTTCTTTTTCCTAGGACTCAATGCCTAACTCTCCTTTGAGTTCTGTGAGGCTTTGGGGTTCGCCTTGATCCTCTGCGGCCCATTCCATTGCATTAAAAAGCCGTTGGGCATTGGCGGGCGATCGCAATAAATAAACGGATTCGAGGAGGCTAGACAGTTCCTCCTCGGCAATGAGCGCGATATTTTTTTGATTTCGTCGCTTGATCACCATGATTTGGGATTGGTCATGGACTTGATCGAGGATGCTAGCCAGGTTAGCGCGGGCTTGGGAATAGGTGGTTTCGTGAATCAGCATTAGGACGCCAAAAAAAAAGAATTGTACAGATTTATTGTACAGCTTCTTTCTAAGCTGATGCAGTCATGACAATTCTGATTTGGTGCTCTGCACATAACACAAAATTTGAT # Right flank : CGCTGGTCTTTCAAAAGCTTGTTCGGAGAGAACTCCAGCAAGCATTTGCGACCGATAGCAAAATCTTACCAGACTCTAAGGAAAAAACCCAATCAAAAATCCCTGAAAACCTTTCTAGACAAGCAGTCGAGCAATAGAACACAGTTGGTACCCTTTCAGCCATTTCCCACATTGGTCGCTAAATAATCGTTGAAGAAGGCGGACAAGTTAGAGGAGGAGATCCCCAAACTTCTACCTGAGACAAAGTATGACCGGAAACCGGATAAAACCGTAAACTGTCCCCCTTATCCTCCTTGTAGTGACGCAAAAGCCGCTTTTTCAACTCCTTGTACTTTTTGGGAGAGAGATGACATTCAAAAACAGAATATTGCACCCGCACCCCGTAGCCCTCCAGCAGATCCGCGATCTTTTTGCGCCGTTTGTTATCACAAATGTCATAGGCCACCAGATAAAACATCAACGAATTTCGTAGGGTGCATAGCCCAACACCGGACGATAAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //