Array 1 27856-29960 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGHYH010000007.1 Micrococcus luteus strain NE2TL6 NODE_7_length_153558_cov_341.146070, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 27856 28 100.0 33 ............................ CAGCCCGGCCCAGCCGATGGAGCTCGCGCCCGG 27917 28 100.0 33 ............................ CCGATCCCACGCGGCCCCGGTCTGCGGGTGCCC 27978 28 100.0 33 ............................ CGTCATCCGGTGCGGGAACAACGGGTTCAAGAC 28039 28 100.0 33 ............................ CACCTCCGTGCATCGCTACGAGAAGAAGGCGGT 28100 28 100.0 33 ............................ CGACGACCACGCCACAGCAGCAGCAGCCCTAGC 28161 28 100.0 33 ............................ CACCGTCGTCAACGCGCCCTGCCACACAGGCCC 28222 28 100.0 33 ............................ CACGTTGGCAGTCCCGAACGTGGTGAACCGGCC 28283 28 100.0 33 ............................ CGTCGGGAAGTCAACAACGAACTCCAGGACAGC 28344 28 100.0 33 ............................ CGTTCCCGGACAGGTACGTCGTCTTGGGCACCA 28405 28 100.0 33 ............................ CGTCGGGCGGCCGCGCTCGACGGTGGCGGTCAC 28466 28 100.0 33 ............................ CGGGTGGCAGTGATCGGCCTGCTCGCCTTCACC 28527 28 100.0 33 ............................ CTCCTACTCGCTCGGCGTCAGCATGGACGCGTC 28588 28 100.0 33 ............................ CGCCGACTGCCTGGCCGCGCTCCGTGACATGCC 28649 28 100.0 33 ............................ CTCGACAGCATCAGCGCCCAGGTCCAGGCGGCC 28710 28 100.0 33 ............................ CCAGCTCGACTACGACGAGTTCATGATCGACCT 28771 28 100.0 33 ............................ TCAGGAACAGGGTGTCAGTGGTGGACGCGAAGC 28832 28 100.0 33 ............................ CCAACCTCATCCATGTCGGACTTCTGCTAGTCG 28893 28 100.0 33 ............................ CAGCTCGTCCAGCTCGTCCAGGAAGCCCTCAGA 28954 28 100.0 33 ............................ CCTCAGACAACAGCATCGGCACGATGTGGCCTC 29015 28 100.0 33 ............................ CTCGGTGGCCTCCGAGGGGAACAGCGGGTCGTA 29076 28 100.0 33 ............................ CCGGATGCCGCACACACGCTGCTTGGCCGGCAC 29137 28 100.0 33 ............................ CGACAGGACCTCACCGGCCAAACGCTGAAGCCG 29198 28 100.0 33 ............................ CGGTGTGCTCGTGGACTCGGACACGGCGGGTGG 29259 28 100.0 33 ............................ CGTGTTCGCGGTGTATCGGCCTCAGAAGGTCCA 29320 28 100.0 33 ............................ CGTGGGCGGCATCGCTGAGGCTATGGGCATCCT 29381 28 100.0 33 ............................ CCCAGCCGGTCAACATCGGACAGGCTCATCTGC 29442 28 100.0 33 ............................ TGAGACGACGGCCCGCACCACGGTGGAGTGGTC 29503 28 100.0 33 ............................ CAAGAAGATCGAGCACGCCCTGTGCGTCACGGT 29564 28 100.0 33 ............................ CCACACCCGCAACCAGAAGGTCGCCGAGCAGTT 29625 28 96.4 33 .........................A.. CGTCGTGTTATGCGGCACCGGGATCCTCGACAG 29686 28 100.0 33 ............................ CGTACTCGAGGGTGTCCGAGCCGGTGCGGCGGA 29747 28 100.0 33 ............................ CACCAGGCAGCGGGAGTGGATCTGCAGCGACGG CTA [29762] 29811 28 96.4 33 ......T..................... CGCTCAGAACACCGCCTGGGCGAACCTCGCCGC 29872 28 96.4 33 .C.......................... CAAGGCCTCGGTAGGTCTGTTCCAGCAGCAGCC 29933 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 35 28 99.7 33 GTGAGCCCCGCGCGAGCGGGGATGAGCC # Left flank : TCTGTCGCTGTGGAGCGGGCGTGGTGACGGGTCAGTCGCCGGCGGAGTGGGCTATGGAGACCCCGAATGATGGTCCTTGTAGTGACCGCGGCCCCGGCAGGGCTCCGCGGTGAGCTCACCCGCTGGCTTATGGAGATCGATGCCGGTGTGTTCGTGGGCAATCCGAGCAGCAGGGTGCGCGAGGCCCTGTGGGCCCGAACCAGGGAGTCGATCCGAGACGGGCGGGCCCTGTTGGTTTACCGGACGAACAGCGAACAGCGGCTCCGTGTGGAGACGCATCGGCATCATTGGACGCCGGGTGACTTCGATGGCTTGACACTCATGCGACGGCCTCTGCCGACAGGAAACGCCCCGAATGGCGCAGACCGGCGGACAGGGTGGAGCAACGTCCGGAACCGTCAGCGATCCCTGCGTCCGGCGTGGCGTCGAAGTGGCGCTGAAAGTGAATGAAACTATGCGCGCAGCTTTCTGGCACCCTTGGATTCAGGCCGGTTTCTAAG # Right flank : CCGTGCCCGCGTCCACCCCATCTCTGAACTGAAGCGCCCTGGGTTTCCTTCCGAGGTCAGGACGCAACCCGGGGCGCTTCACATCTCTCACACGTGGCGGTTCGGCGCGTTGAGGATCAGCGCGCCGAGTGCCCGCCCGTGGAAGCGCTGGGCCCGCACAGGTCGAACAGCGGGATGGGGTTGGCCAGATCCCCCAGGCGCATGGCGCCGACCCGCCCGTGGCCGTCGGCCTCAATCCAGAACGGGACGGCGTCCTGGTCGTCCTACGCGCCGGCGTGGATGGGTTGAGGGGCGGCGCGCCGCTTGACGCGCGCCTAGAAGGGCCACGTGTCCTCGGGCAGTAGTGCGGCGAGCCCGTCCTGACCCGCCCCTCCCCACCCGGACCCCTTCCGAGTCCGACACAATGCATACATCCATGCATGCATCTGATTATTCTGGCCCGCATGACTCCACTCTCCGACCCCTTATGGGGCAGTCGTGCCACGGCTGCCGGCCGCCTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAGCCCCGCGCGAGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTGCCCCGCGCGAGCGGGGATGAGCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //