Array 1 99101-98140 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_VUKI01000007.1 Staphylococcus sp. GDX7P312P GDX7P312P-1_(paired)_contig_7, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
     99100	    36	 100.0	    31	....................................	CCTGTATCTTTAAAATCGTTTATCGATTGCC	
     99033	    36	 100.0	    30	....................................	ACGTAGAAAGTGGGAAGTGTCAGAAACCGA 	
     98967	    36	 100.0	    30	....................................	ATGAACAAGAGTTGAACGGTGATGAACGTA 	
     98901	    36	 100.0	    30	....................................	ATAGTTTCTTCATCTTCTTCATCGTCACCG 	
     98835	    36	 100.0	    31	....................................	GTTGCACATGCTGATGTAAAGTCTTCAGTTT	
     98768	    36	 100.0	    30	....................................	CCATGCCTGATATAACCGAACTTACGATAC 	
     98702	    36	 100.0	    30	....................................	GTGTCGGGTGATTAACATTATCTTTTTCTA 	
     98636	    36	 100.0	    30	....................................	TTCACGCGTTACACCTAAAAGCATTACCTA 	
     98570	    36	 100.0	    30	....................................	AAAGTGGTTATCCTGAATGGATTATCCCTA 	
     98504	    36	 100.0	    30	....................................	ATTGAAAAAGAAGTCGATGCATCAGAAATG 	
     98438	    36	 100.0	    30	....................................	TACTAAACGTATTGCAGAAGCTATTCACGG 	
     98372	    36	 100.0	    30	....................................	CGACCACTTAATAATAAATAGTAGAGTTGG 	
     98306	    36	  97.2	    30	.........................T..........	TAGTATCGGAAGGTTTGTAACCACTATTAG 	
     98240	    36	 100.0	    29	....................................	CAACTTTGTTTGATCAATCATAGTTTATC  	
     98175	    36	  77.8	     0	.................C........C..A.ATTTA	|                              	
==========	======	======	======	====================================	===============================	==================
        15	    36	  98.3	    30	GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAGAC	                               	       

# Left flank :   CGATACAAACATAATTGTATTAACAGGATCATTACATTTCCTATCTGAAGAGTGGAAATACAATAACTATATTAGAGATGGGAAACAAAAAAACACATCTGAATTTCTAGAAGAATTAGAGTGGAACGCGCCACTTGATTTTGATAAGAAGGATTTAGAAGAAAGTTTGAACCGATTCATTTTAACTTATCAAGATAAATTAGAATTATATCCCATAATATCAAACTATCAAATAGCACAAATTATGTTATTTAATGCCATAGATATATATGTTGGGATTTCATATATGCAACATTGTAATCATAAATTTAAATTAAAAATCAAAAGTGAATTGCTGCCTAAAAGCATCAATAAATATTTAAATCAACAATTGCTGAATTAATTACTTTACTATAATTAACTTAATAAATTATTATTATCTTAGTGAATGAGTTTAGCTAACTTGTTCACTAAGATACCTTTTTTTGAACTAATTCTTTTAGCGATTAATATTGCTAGAG
# Right flank :  AATTAATGATTACTAAGTGCTGTTACTTGCTACTTTTATTATCATGATCAATCAATTGATCAAAAGTATAGAAATATTTAAATTTAATAAAAATATTAGTTGACTAAGCATCCATGATAGCAATATAATTAATTTATAGAACAAGTTTAGCTAACTTGTACTTATACCTAAAATTACAGAATCTACTAAAACAAGACTTTATGTCGTGTTTATCCCATTAATTTATTAATGGGATTTTTTCTTTTTAATTAGACAAATCGCCAACGATGATGACTATCGTTGGCGATTATTTTTGTTTAATGTCACTTAATTACACATTATCATCAGTAATTTGACCAATCCAATAACTCGCTGCAAATCCAATGATTAAAGTGATGATTGAAAGTGTCCACTCAATACCAGTTTGAGGAAGACCAGGGAATACAGCATATATGGAGCCAATAACGAATCCAGTTATTAATGCGAATGTGGTATAGAAGTGATGATGTAGGAAGTATTTA

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAGAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-3.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [9-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
//