Array 1 506274-505402 **** Predicted by CRISPRDetect 2.4 *** >NZ_FVYR01000003.1 Mycobacteroides abscessus subsp. abscessus strain 1100, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ==================================================================================== ================== 506273 28 100.0 33 ............................ GAAGAAGATCTTTTGCAGGCTGACGTCGCCCGA 506212 28 100.0 33 ............................ GCTCGCCTGACCAACCCCATCAACGACGAACGG 506151 28 100.0 33 ............................ GGAGCCGACGGCGCTGGCGGCCGGCAGCGAAGA 506090 28 100.0 34 ............................ CACCACCGCCCCGCTGTCGCCGATCTCGGTGCGT 506028 28 96.4 33 .............G.............. GAAGGCGCAAGAGAAGTTGGGCACCCTCGGTAC 505967 28 96.4 33 ........A................... GAAGGCGCAAGAGAAGTTGGGCACCCTCGGTAC 505906 28 96.4 33 ........A................... GGTGAGGGCTGTCGAGGTCGCCGGCGGCACCGT 505845 28 92.9 33 ..C..........G.............. GTTGGAACAACTTTCTGGATTCTGTCCCACCCT 505784 28 92.9 32 .............G..T........... GACCGTCGCCACCAGGTGCGAGACGCTCACCC 505724 28 96.4 34 .............G.............. GCTGCCCGCGCGCCGACTTCCCGGCGGCCGTCAG 505662 28 96.4 32 .........................C.. CCGAATCGGCGGCCGCGTGTCTGTCAGCGCCG 505602 27 82.1 33 ...T..........-......G..TT.. CCGGGTTCGCCCGGCCACCCGCACCGGTTCGCC C [505600] 505541 27 82.1 84 G...........T.-.........TT.. CGTCAGCTTGCCGTTCGCGTAGGCGAGCCACTCGCGTGCGCGGGGTGTTCCCTTGCCCGCGATCCGTGTCGGCCGCACTTACCG 505430 27 82.1 0 G..T........T.-......G...... | T,T [505405,505408] ========== ====== ====== ====== ============================ ==================================================================================== ================== 14 28 93.9 37 CTGCTCCCCGCGCAAGCGGGGATGAACC # Left flank : GAGAGCCACCGCGGCAATGATGCCCGCGGCGGCGATCTTGAGCGCGTTTCTGCTGGTCACGGTTTCGATTGTTCCAGACGATGTCGAACGAACCGCCGAATGCGATGTCACGTCCCCCGTCCGGATGTCTTGAGCGGGAGCCGGATTCATGGACGTACCGCCTCGGCGAGGCGCCGCTCCACGGCGCGGAGGTCATCGATCGCAGCGGTGAAGTTGGCCCCGTCGGTGCCGGTGCCGTGCGCGTGTTCCAGGAGCTCCACCACGCCGCGCAGACGCGTCTGTGCGCTGCGCACATTGTCGTGGATCGACGTCGCCGGGCTGGTGATCAGGTCGCGGTAGTCGGTACTCATGCCCGACACGGTGCACGCCCCAGCAGCGAGGTGACGCCCGCGGCGCGGGTTCGGCAGGTGCGCTCGCCATGCTCGCAGGAGGTGGCGATTGTTAGCTTGTCACAGGTGTCAAACTGGGCACTCGTGCTGTATCGTCCCAGGTCAGGAAGT # Right flank : GTTTCCATTCTCTGTTTTGGAGAATGTTTCCGCTGGTAGAGGCGCTGCGGTGAATGCGCGTCCTCCTTGACGGCGTTCGCACAGATGTGCACAATCGGTTCAAGTCGCGATCCGAGCGCGACGGCGGCCTCCGGGTCGTTCAGGGCACGTGCCGCATCCGCCGGACACGCCGCTCAGCTCCCGCCCTCGGACCAGGGACTGCTGAGGGTGCACCCGGCATCACCTTCTTGTGATGCCCAGGAGTGCGCCCATGAGTGCCAACATCACCCTTCTCACCATCGACGCTGCTGCTGCGCGCCGCGGCGTTCATCACTCGACTATCCGCCGCTGGATCCGCGAGAGCCTCCTCCCGGCTACCCGTCTGAGCGACGGCACCCTCCGCGTGACCGCGGCCGACCTCGACGCGGTTCGTCCGCCGGAACGGGTGAAGCCCCGCTCCGGTGACACCGTGTCGACCCTGCGCGCGATCGTGAACATGACCGGCGGCGCGATCGAGGACC # Questionable array : NO Score: 5.49 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCAAGCGGGGATGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCAAGCGGGGATGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //