Array 1 13187-9135 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKXK01000048.1 Acinetobacter junii strain TUM15534 sequence048, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 13186 28 100.0 32 ............................ TTGTTCATCATTCCGATAACAAAGAATCTGGA 13126 28 100.0 32 ............................ TATGCACGATTGATACGGTTTTAGATACTACA 13066 28 100.0 32 ............................ ACGCTTAGCAAAAGCAGCCACAATCACGTTTT 13006 28 100.0 32 ............................ AACTTATGTTGAATTACACCCAACTGACACAG 12946 28 100.0 32 ............................ CCAGCCTTCATTAATTAAATCTGATTTAAGTT 12886 28 100.0 32 ............................ AAAGCACGATTATTCATGATATTACCCCTGTA 12826 28 100.0 32 ............................ GTTATGGGGATGGTGAACGGTTTAACTATCAA 12766 28 100.0 32 ............................ GATAATCAGCAAACCAAACACCGCAAACATAA 12706 28 100.0 32 ............................ AGTGGTTGGGGCGATATTTGCACTGACTTTAT 12646 28 100.0 32 ............................ TTAACCTTGCGACCAGAGTTGTATGTTGTTTC 12586 28 100.0 33 ............................ ATCCTCATCCCACTCAGCTAAACTACATTCTCT 12525 28 100.0 32 ............................ TGTGCTTGTTGATACTCGTCTGTAGCTACAGC 12465 28 100.0 32 ............................ AACAGAAGATAAGACATTTCAACATGCGTTAT 12405 28 100.0 32 ............................ ATTGGAGGAACTGAGGTTGCTGGAGAACTGGA 12345 28 100.0 32 ............................ TCTACATATGAGAAATCATCTTTAAATTTTTC 12285 28 100.0 32 ............................ TTTTTATGCTGTTAGAACTATCTATTCAAACA 12225 28 100.0 32 ............................ TTTCGGGAAAATGGGTGTATTAGAAAGCACAT 12165 28 100.0 32 ............................ AGCTGCTAGAGGTTTGGTAAACTGCGAAATAT 12105 28 100.0 32 ............................ TGTTTCAATTGATGGGAACACCTGTAATGGTG 12045 28 100.0 32 ............................ TGTGTAACTGTAGTTGCTGGATAGTTATTTAG 11985 28 100.0 32 ............................ TTACGCAATGATTTAATGGTTTTTTGCATGTA 11925 28 100.0 32 ............................ ACCACACCGCTGTTTAAAGCTGCTGACTCATT 11865 28 100.0 32 ............................ TGACGTAAGAAGATTTTCCAGTCAGCGTTCGT 11805 28 100.0 32 ............................ CTTGTCATGAGATTTTTGCAATTGCTGTTCTA 11745 28 100.0 32 ............................ ATAAGGGAGCAAAGGTCGAAAAAGGAAATTAT 11685 28 100.0 32 ............................ TGACCACCATATTCAACCTTATTTTTACGCTG 11625 28 100.0 32 ............................ GCACAGGTATTATTGGGAGACCATTTACCATG 11565 28 100.0 32 ............................ TGTCGGGCAACATCATGCTTCCCTTTATGCTT 11505 28 100.0 32 ............................ ATTAGTTATGTACGAAGTAGACACACCAAAAT 11445 28 100.0 32 ............................ AGTTGGTAGTTGTGATTTTCAATTTTTTTACT 11385 28 100.0 32 ............................ AAAGAAATTTATGCTTTCCCTGATAAAAATAA 11325 28 100.0 32 ............................ GTTCATATTTGGGGCACAAAACAAAACGGTGG 11265 28 100.0 33 ............................ CAAGCAAGGAACAAGAAAAAGAACTGATCAATT 11204 28 100.0 32 ............................ AGTCTTCGCTAAATACTAAACCACCTCTATCA 11144 28 100.0 32 ............................ ATGTAATATCGGCAGCTTTTTTAATGGTTTCA 11084 28 100.0 32 ............................ GGTTGAAATTGATAGCTTTAATACAACAACAT 11024 28 100.0 33 ............................ TCAATACATCTTTACCGATGAAGTAGTTAATAA 10963 28 100.0 32 ............................ GTAATCAATATTTCCGAGAGCGAGTATCTGTA 10903 28 100.0 32 ............................ AATGTTCCCAATTAGATACATTAACTAATCAA 10843 28 100.0 32 ............................ ATTCAAAGTTAGGACGACCAGTGATGGGAGCG 10783 28 96.4 32 ........T................... TGATTGTTTGGCAATACATGACCTAGCATAAT 10723 28 100.0 32 ............................ AGCGAATGTCAAAATTAACGATGAATATTATC 10663 28 100.0 32 ............................ ATGCTGGGGCGCAAAGCCAAATTTTGGAAATA 10603 28 100.0 32 ............................ CAGTAGCAGCCGTATTTCTTGACACCATTATT 10543 28 100.0 32 ............................ TTTCCACTTTAGGATTCTTGTTGTAATGTCAA 10483 28 100.0 32 ............................ TAAAAAGTTTTGCATATCGAATTGAGGCTTAG 10423 28 100.0 32 ............................ GCCACGGGGTCGAACGGCAAAGGGTCTGCTAA 10363 28 100.0 32 ............................ ACGTGAAAACATTAATTGCCTAGCACCCTTGA 10303 28 100.0 32 ............................ GCGACGGTCGCTTGATCAATTTTCGCCGCAGT 10243 28 100.0 32 ............................ CCCGAGGATTGGAGCATTGACGCGGTCGAGGA 10183 28 100.0 32 ............................ TCACTTCATTGGCGGTAGTGGCGCCTCGTCCG 10123 28 100.0 32 ............................ TCGCGCTTGGGTGTCAGCGCTCTAAATGAATA 10063 28 100.0 32 ............................ AACTTATTCGCTATCAACGTGAAAATCCTACT 10003 28 100.0 32 ............................ TGACGCAATAGCGTGGGCGATAATGACGAGCA 9943 28 100.0 32 ............................ TTAGTCAATCTGTAAGCAATCAACTGGCTTTA 9883 28 100.0 32 ............................ AGTTACCAAAAATTAAAAAGGTGCCAGCATGA 9823 28 100.0 32 ............................ ATAAGAAACCTGACAGCTATTGCATTTTGGGC 9763 28 100.0 32 ............................ TGTATGACGATGTACTTCTAATTCTTTTACTC 9703 28 100.0 32 ............................ AACCCCAACCACTGCTGCTGCTACTGGCATAA 9643 28 100.0 32 ............................ TGCCATGAAAGCATGCCAACATTTATAGCTTT 9583 28 100.0 32 ............................ GTGCGCCAGTGGATCGCTCAATGTGGACGTCT 9523 28 100.0 32 ............................ GAACTCACAGCTAACATTGTGGGCGTGGCCAG 9463 28 100.0 32 ............................ TTATAGGGGCAGCGTTCTACCTGCATTTAAAT 9403 28 100.0 33 ............................ TGTGCCAATTTGCCCTGACACTTCACCGATGAT 9342 28 100.0 32 ............................ TATTTTCTTCTGCACAATCAATACAGCACAAT 9282 28 92.9 32 ..........A..C.............. ACAAAAAGGACGGAAATTAACTATCTGAAGCA 9222 28 92.9 32 ..........A..C.............. ATATCAGAAACTCTAAAGCTATTGGAGTGAGC 9162 28 89.3 0 ..........A..C.............G | ========== ====== ====== ====== ============================ ================================= ================== 68 28 99.6 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : TTAGATATTCGAAAATGGCTGGAACGTTTAGAAGATTATGTGCATATTACATCAATTCGTGAAGTACCTAGCGATATTAAAGGCTATGCCATTTACAAGCGTAAGCAAGTGAAAACCAATGCCCAGCGTTTGGCACGGCATCGTATTAAACGTGGAGATATTGGCTTTGATGAGGCATTAGCAAGATATAGCAATGTAGTTACCACAACGAACTTTCCATATATCGAAATGAAAAGTCTGAGCACTTCAGATCAGCAAAGTGAAAAACGTTTTAAATTGTTTATCGAAAAGCAACCTGCTGAAAAAACCAAAACTCAGGTTTTTAGTACTTATGGATTAAGTTCAGTATCATCCGTACCCGAATTTTAACCCAATATTTTTTCACTCTTTAACAGCTTAATAAAATCAATAAGTTATAATAGTAAGTTAATACTTGGGTCTTTTATAGGATTTTAAGCATAACTTGCTGTTATAGCTTTATTCTTTATGTTAAAACTATT # Right flank : TATTATTTTCAGTTATACTTATGCAAGCGAGATATTCTGTAAGTAATTCTTGTAATAAAAGCCAATTATTTCAGTGAGATAATTGGCTTAAGTGAGAGTTGCGATTATCCGCTAATTCGTCGGTCATCCCAATAACACGGCACTACAATCAAATGGTTCTCATGTAACCGAGACCATAATCTTACACCTAAATCCCGCTGTATATTTTGGACTGTGAAATTGGAAATCAGCAGGGTAGATTTCATATTGTCATAACGGCTATATAGAACCTTATGTACCATCTCTAGGCGTTTTTCATGCCGGTCATGCAGGCCATATTCATCAATCACTAATAAATCAAAACTGGAGAAATGGTCGATGACTTCTTTCTCAGAGCGTGAAGTGTCTGACCAGGTATCCATCATTTTTTGAGCAATTTCTGCACTTGTATAATAGCGTGCAGATTTTGTACTGTTATGCAGAATGTTGCGAATAATTGATGCGCTCAGATGGGTTTTACC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 50001-56992 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKXK01000009.1 Acinetobacter junii strain TUM15534 sequence009, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 50001 30 93.3 30 ............................AA CAACCGTCAGTTCTAAAAGCAGGCGGACGA 50061 30 96.7 30 .............................A TAAACCAAAGCTCGGGAGACTTACAGCCGT 50121 30 96.7 30 ............................A. TCGCAACTATCTACGAATTTGAACGATGGC 50181 30 96.7 30 ............................A. AAGCTGCTTTTGATGTGCCCTTTTCCATTG 50241 30 93.3 30 ............................AA GAGCATAACACTTACGAGTATTGTGCAATT 50301 30 96.7 30 .............................G CTGCTTCTACCGCTTGTTTTGCAAGTCGTA 50361 30 93.3 30 ............................AA TAAGCTTGTGTATGGATGAGCAACGGAATA 50421 30 100.0 30 .............................. GAGAAAACATACAAGCTTCACGTTTCCATC 50481 30 100.0 30 .............................. GTTGCCCTTGATGAGTTGTCATATATCCCA 50541 30 96.7 30 ............................A. TCACCCCTCCGTATCCGCTTTTGGTTCTAA 50601 30 93.3 30 ............................AA CAGCCAATTCCTTGAAAGTCACGCCCTCAG 50661 30 96.7 30 .............................A GACCCAAGAGAATACTGCTCAATAATTCTT 50721 30 96.7 30 .............................A CACCACCACCTAGAAAATAGTAAGGTTGAA 50781 30 93.3 30 ............................AA CTGCTGCGGTCGGTGCTGTAATCACCACTA 50841 30 93.3 30 ............................AC GTGTGGTTTTTGAATCCTTAAGCATCTGCA 50901 30 96.7 30 .............................G CACGATTGACCTTGTACGAATACAGACGAA 50961 30 93.3 30 ............................GA ATGAACATTGAACGTCAAAAAAAAGATGCG 51021 30 93.3 30 ............................AC ATACTCACCTTGTTGCATTTTCTTTCACCA 51081 30 96.7 30 ............................A. CATCGGCGATATGACCGAACATGTTTTACT 51141 30 93.3 30 ............................GA AATCAACGAACGGTGACTAAACGATTATTT 51201 30 96.7 30 .............................A TAACCATCAATGTATACAGGCACATCCTCA 51261 30 96.7 30 .............................C TGGAGTTGTTCCAACTGCCGCCGTGTTAGG 51321 30 96.7 31 .............................G AGTGCGAAGACGATTCTAGCCGCTTCATGCA 51382 30 93.3 30 ............................GA ATGAGGTGAGCATGTTTAAGGAATTCTTTG 51442 30 96.7 30 .............................G AACAAATTAAAACGGCGCTGCAGGAGCTTC 51502 30 96.7 30 .............................A CGAGGAAATTTTATGAAACAAGCGCCTAAA 51562 30 100.0 30 .............................. ACGACAGCATGATTTTTAATAGAGCTGCTT 51622 30 96.7 30 ............................G. ATGCAATGACCGCAGCCTGACGGCCAATGA 51682 30 93.3 30 ............................AA TCGGAAGTCTCGGCGCTGCAACGGTTGATA 51742 30 100.0 30 .............................. GTTGGTGAGCCTACGGCCATACGATGCGAT 51802 30 96.7 30 ............................G. CGAGATCATTGGTCGGGCTGGAAAGCAGCC 51862 30 100.0 30 .............................. GTTGGTGAGCCTACGGCCATACGATGCGAT 51922 30 96.7 30 ............................G. CGAGATCATTGGTCGGGCTGGAAAGCAGCC 51982 30 96.7 30 ............................A. GCGGTAGTTCTTGTCATCCCACCACGGATA 52042 30 96.7 30 ............................G. GTAGCTTTGAGCAATGCGAATGCACCGCTC 52102 30 96.7 30 .............................G TATAGATTGCGCTGTTTGCGCCATGTTCAA 52162 30 93.3 30 ............................AC ATAAAGGCGCAATACAAATTCTTGCTGACG 52222 30 96.7 30 ............................A. ACTGTGACAACTGCTCTTCGCGGTGTAATT 52282 30 93.3 30 ............................AC ATTAGCGGAGTAACAATATTAATCCAATTA 52342 30 93.3 30 ............................GA TACAAAGCCTGACTCATGCAGCATTGTATC 52402 30 93.3 30 ............................AA ACAGCGGCAATAACGGCGCTTTCACGTTCC 52462 30 100.0 30 .............................. ACTGCCATCTATTCAGGTCAAAAAACTCAA 52522 30 100.0 30 .............................. GAGCACGTAATACGTTAGCGTGATTCATAT 52582 30 96.7 30 .............................G TAAAGTTGAAACGTCTGCTTGCGCAGAAAC 52642 30 96.7 30 .............................C AAAAAACACCCGACTATATCAATGATAAAA 52702 30 96.7 30 ............................A. GGTCAGTATCAGTTTTCTATAATTGGGTTT 52762 30 96.7 30 .............................C GCTTCTTCTCAAAGTGCGGCTTAGTGAGAT 52822 30 93.3 30 ............................GA GCACCCAATTCACGCTCGATGAAATGACGT 52882 30 93.3 30 ............................AA CAACAGCAGTTTGTACGCCTGCTAGTTCTT 52942 30 93.3 30 ............................AA TAATGGGACTCCCCAACATAACCATTTGCG 53002 30 93.3 30 ............................CG ATGGTAATATACTCGTAATTCTGTATATAC 53062 30 93.3 30 ............................AG TTAGTTAATGTCGTGGGGAAATTGACAACA 53122 30 93.3 30 ............................AA ATAGCGATCCCAGCAGTAAAGCCAAGCCAA 53182 30 96.7 30 .............................G ATACTGAAACCAATCAAGTAACCGATTTAC 53242 30 93.3 30 ............................AC CGAGAGTCCAACCGCCTAGTGTTGTTGTAG 53302 30 93.3 30 ............................AC CTCTTAGAACTTTTGCTACTTGGCTGACGT 53362 30 93.3 30 ............................CA ATCAACAGTGCCTAGCAATTGCTCTACTGC 53422 30 93.3 30 ............................GA CGACATCACAGATACTTCTGTATCTTTCTC 53482 30 93.3 30 ............................AG AGACTTCATTTGTGTATTCAATGACTTCTT 53542 30 96.7 30 ............................G. CTACAAAAATATGTCAATCGTGGTGCTGTT 53602 30 100.0 30 .............................. AAGGCTGCCCCAGTTGATGGCTCTCTATGT 53662 30 96.7 30 .............................A CGGTTGGTGCTGTCTCGAAAGTTCTTGCGC 53722 30 96.7 30 .............................G AGTATTGCGACAACGATGGAAAAATGTCAC 53782 30 96.7 31 .............................G ACAGGGAATACAAGGGTGATGATTTTGAAAT 53843 30 96.7 30 ............................A. AGACCAGACACAGACACATCACTATTTACA 53903 30 96.7 30 .............................G CTAACAATCAAATTGTCTATAAAACATCAT 53963 30 93.3 30 ............................AA TAGTTCTCTAATTTCTTGTTGTGAATAATA 54023 30 96.7 30 ............................G. ATCTGCTGCGCTTATGAGCAATGCCAATGC 54083 30 96.7 30 .............................G TAGAAGTAACTCCAGTAGAACGCAATATCT 54143 30 96.7 30 ............................G. GAGTTGTTAGGTCGACAATCATGGGATTCT 54203 30 96.7 30 .............................A ACAGCCAACCACAGCCCGAAAAAATTACTA 54263 30 93.3 30 ............................AG GGTTTTTATCCCTGGTTCCAGGTCTCTTAC 54323 30 93.3 30 ............................AA TTGATCTACAGCATCGAGTTTATTTTTAAC 54383 30 96.7 30 .............................A CCGAAGATAAATACCAAGTTGTTGTTTATC 54443 30 96.7 30 ............................C. GTGTTGTACATCGTTGCGAGAAATATTAAA 54503 30 96.7 30 .............................C ATTAACGGCCAAGCGTGGACACGAGAGCAG 54563 30 96.7 30 .............................C CTCCGCCACTTGGATGCGCGACATTTTATT 54623 30 93.3 30 ............................AG TGAGAGTTTCTTTTCTTGATCTTGTTCAGT 54683 30 96.7 30 ............................A. AAAAGCCCCGATTAATTGGAAAGGGGGCGA 54743 30 100.0 30 .............................. ATCAAGGACGCCTTAAGAAGTATTGCTCAT 54803 30 100.0 30 .............................. TGCTAGCTACACCCTTATTGATTAGATCAA 54863 30 96.7 30 ............................A. GATGTATACAATGTTACGCGCATCTGAGAT 54923 30 100.0 30 .............................. AACGATGTACAATCGCCTGATTTTGAGAAA 54983 30 96.7 30 ............................A. CGAGCAATTGAACCTAGCATTTCCTCTGTA 55043 30 93.3 30 ............................AA TAGAAATTGGATTCACTGCATCAACATTGG 55103 30 96.7 30 ............................A. GGTGTGGAAGCGTTCTGAATCCATGCGAAT 55163 30 93.3 30 ............................CA ATCAGAGCGAGCAACAGTAATTACTAGTGA 55223 30 100.0 30 .............................. GCACTGCAGAACGAGTTAAAAAGTTCATCG 55283 30 96.7 30 ............................A. AGAGAGCATCATTTGAAGTGATTAGATCAT 55343 30 100.0 30 .............................. TAAGGATTAAAACTGATTCAGGCTATCTAT 55403 30 96.7 30 .............................C TATGCGGAACAATATGATCGACTACGTTAG 55463 30 93.3 30 ............................AA TAGAAATTGGATTCACTGCATCAACATTGG 55523 30 96.7 30 ............................A. GGTGTGGAAGCGTTCTGAATCCATGCGAAT 55583 30 93.3 30 ............................CA ATCAGAGCGAGCAACAGTAATTACTAGTGA 55643 30 100.0 30 .............................. GCACTGCAGAACGAGTTAAAAAGTTCATCG 55703 30 100.0 30 .............................. AACGATGTACAATCGCCTGATTTTGAGAAA 55763 30 96.7 30 .............................A TATTTGAGAAAGGGCCATTTAGCACTTAAT 55823 30 100.0 30 .............................. TAGGAATCCACCACATGACATGGTAATGAG 55883 30 93.3 30 ............................AA GAAGGAGCGAGAAGCCAAATTTTAGCTACA 55943 30 93.3 30 ............................AG TAGGGCGAGAGTAAGACAAATAATTCTGCA 56003 30 96.7 30 .............................A CTTGAAATAATTTGTTTTTTGCTTGGTGGT 56063 30 96.7 30 .............................G CTCAGCAGATAAGTAGCCTGTTTGTTGTGT 56123 30 96.7 30 .............................G CAATTCATTTACAGTTCTCGCCATAACAAT 56183 30 93.3 30 ............................GA TAAGTTTTAATTTGTGCGCCGATGCCACAC 56243 30 96.7 30 ............................A. CAATCACACAATCTTCATCCGAACCAAGAA 56303 30 93.3 30 ............................AC GCAAGCGAGTTGCTTCTAAACGAGCATCTT 56363 30 96.7 30 ............................A. CGTCATAAGCATTTAATCGAATACCCTCAA 56423 30 96.7 30 ............................A. CTAGTGTTATTGGGTGGGTAAAACGATTTA 56483 30 96.7 30 .............................G TTTGACCTGAATCCAAAACCAAATTAAAAG 56543 30 96.7 30 ............................G. ACAGGCTAATGTTAAGCCATGTCGGGTGGG 56603 30 96.7 30 ............................A. TCGGGGGTGATGTGAGTAAGCAAAACGATA 56663 30 100.0 30 .............................. CACCCCGACTTTGTAATTTCCTCCGACATT 56723 30 96.7 30 .............................G ATTCAACGGGTGGCAAAAATAAAGCTGAAT 56783 30 100.0 30 .............................. ACAGCGCAGGGATGTGCTGCGGGTATAGTA 56843 30 93.3 30 ............................AG CAATTCATGGTATGGGTTTTATTAGCGAAT 56903 30 93.3 30 .............C..............A. AAAGCAATATTGACCAATAAAAGTAAGCGT 56963 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== =============================== ================== 117 30 96.0 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GTAAATGGCTAGAACGATTCATTGATTATGTTCATATCATTCAACCGAGAGAAGTACCTCAAGCTAAAGTTACTGGTCATGCACACTATTATCGAGTCAATCCAAAGATGAGTGTTGAAGAGCGTATAGTTCATCAAGCGCAACGTCGAAATATTTCTTTGGATGAGGCTACGCAGCATTTTAAACAATATATTGAAAAACCTATTATTGAGCCTTATGTGAGTTTAAAAAGTCTGAGTGCAAAACGAGATCAAAATATAGATCGACCATATCGTTTATATATTGGTAAATCTCTAGTTGATGAGGCAAAAGATGGAGAGTTTGGAACGTATGGACTAAGTCGAATGGCAACAGTTCCAGAATTTTGACCCAATATTTTTTTACTATTTAACAGCTTAATAAAATCAATAAGTTACATCAAGTCGTTTTTTGATTGGGTAAATTGCTAAAAAACCATCATAAATACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : ACATGTGATTTATTCATATGAGCCATTTAGAAATGTAACGGTCTTGATTGGCATTTGTTCTGTGTGTTCATTACGGAATTTATTTTAAGAATTAATAAGTGACTTATAATTCTTGTTCCAAAATTATCGTGTTATATGTCATTTAAAATACATAACATCAAGAAATATGATTCTTACTACATTCTAGATCTTTAATTTTTAAATAAGAAAATATACCCTGAAACTAACGTTTTTTTAGTGAAATTTTCATGCGTGGTTTATACCTCATCACCAATGATGATCCCATTCAACTTCTTTTAGAAAAGTTAGAGGCTGCACTAGCTACTGGTCATATAGCTATTTTGCAATATCGTCGAAAAAAAATAGAAAAAATAAATCAACCATCTGAAGTGGAGTTGATCAAAGTCCTTTGTGAAAAATATCAAGTCCCTTTTGTCATTAATGATGATTTGGCGTTAGCAGAACAATTTGGTTTAGGTGTGCATCTAGGGCAGTCCGAT # Questionable array : NO Score: 5.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.18, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //