Array 1 108577-107648 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWXX01000002.1 Pseudomonas aeruginosa strain PPF-13 scaffold_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 108576 28 100.0 32 ............................ CTCTTGCGCCGAATCATCAGCAGCATCGAGTG 108516 28 100.0 32 ............................ AAGACGATTTAGTAGGGCTGCTGGTTGCCGGC 108456 28 100.0 32 ............................ TGTTCAACAAGATCATGGCAGGGCTTAACAGG 108396 28 100.0 32 ............................ AGGAACCGGGAAGACGCATTTGGCGACAGCAA 108336 28 100.0 32 ............................ GACCCGCGCATGCCGGCGGCGAACGACCGGCT 108276 28 100.0 32 ............................ TGTGACATGTTCTGCGGCGTGTACATGTGACC 108216 28 100.0 32 ............................ GAGCAGTAGCTGATGAAATCGACCCAGTCCCG 108156 28 100.0 32 ............................ TCGGGGCTATGCCCATGTCTCTGTCGTGGTGT 108096 28 100.0 32 ............................ ACATCGCGGTCAACTTGGTGCCAGCGCCAGCC 108036 28 100.0 32 ............................ ACCCGGGCGGCGATGTTGGGCAAGTTGCAGGA 107976 28 100.0 32 ............................ TACAACGCCAAGCTCCAGGAGTAGCGGGACCG 107916 28 96.4 32 ......................C..... AGCTCCGGCACCCCGGCGCCCATTGCCAACAC 107856 28 100.0 32 ............................ ACAGAGCAACGCCCATGCGAGGATTCATACGA 107796 28 100.0 33 ............................ GCGCATGTCCATCAAGGAACTCGCCGCCAACAT 107735 28 100.0 32 ............................ TATCACCCAAGCCCGCGACGTCGACGCGGAAC 107675 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 16 28 99.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : ACATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCAATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGTTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCTCATCACAAGACCTTTTGCCCTCGAACGGCACGGTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCTCCAATTGCCCGAAACTTCCGACCCTTTTTTCGGACGATTTCTTACACCCTTATAAATCAGTAAGTTACGAGGCCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATGCACGAAGTGAGGCTTGCCCTCCGAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACTGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAACAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //