Array 1 25856-26419 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABFNH010000025.1 Limosilactobacillus mucosae strain INIA P508 isolate INIA P508, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 25856 36 100.0 30 .................................... TAACGTCGTGGCGAATCTGATCCAAAGCAA 25922 36 100.0 30 .................................... CGTACCAGCTGATTTTATGAATAAGCGCCC 25988 36 100.0 30 .................................... AGGCCTGGCCAAAAATCAAGCGTGGCGCAT 26054 36 100.0 30 .................................... CTTAAGGCTTGCCGCCGAGCCAGTCTTAAA 26120 36 100.0 30 .................................... TCGCTCACCGGAAGACGCGGTCAAGATCGT 26186 36 100.0 30 .................................... CTTTGTCAGCTTCGTTGATGTCAGCCATTG 26252 36 100.0 30 .................................... CCTTTTCGTTGTAGTAGTAGCGATCACCAC 26318 36 100.0 30 .................................... CCACGACTAGAAACCTGCTACGAACAGGTG 26384 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 9 36 100.0 30 GCTTTAGATGGATGTTAAATCAATGATGTAATTTTC # Left flank : AGCACCTGATTTAATGGATAGGTACGGCTCAGCTTTGATTAAAAAGATCAGCAATGAATTGACGGTTGATCAAAGGCAGCAATTGATTGCTAAACAGCAAGAATTGTTGACAGCTATTCAGGATACGCTGTTTTCAGTTGATTTACCCTTGGAAGTCAGCCTTGATGATGGCTTTCAAAGATTATACAAATATGCCCGCCCGCGTTTGATCAGCAGTGCAAATGCGACACCATATGATATAATAAAAAATGATTTAAATATTCATTTAGAGTTGAATGACTGTTGCGTTCTAGCAATGAAGAACATCGCTAATTTTTTGTTGCCAGAACAATTTAAGGCTTTTCTTCAGTTGGTTGAAGAAAGTGGCCTCGCAGTTTTTCTATTGGAATTCTCAGAAAAACAACAGCGTGCGTATTATCAGAACTCCGATGTTTATTGGATTGATGAAGATTTCGTTGATTGGCATCTCTAAATCGTTAGTTTTTGATTAGAAAACAACG # Right flank : TGACAACCGTGATGGTCAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGATGGATGTTAAATCAATGATGTAATTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 151843-151279 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABFNH010000027.1 Limosilactobacillus mucosae strain INIA P508 isolate INIA P508, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 151842 36 100.0 30 .................................... TTTAGCACCTTTCATATTAGCTACAATTGA 151776 36 100.0 30 .................................... TGGGTTGACGTGTTGTTGTTGATTGAAGGA 151710 36 100.0 30 .................................... TACGTTCCGCCCTGCGATCCAAAGCGCCCC 151644 36 100.0 30 .................................... TCGATCATTGGGAAGTAAGCGCCAATCTGG 151578 36 100.0 30 .................................... GTAGGTGGTCAATATTCTGATGCTACAATG 151512 36 100.0 30 .................................... TACGTCAAAGTTATCCCCAGTACCGCCACT 151446 36 100.0 30 .................................... ATTGGATCATTTGAAAAAAGACAGGCATGG 151380 36 100.0 30 .................................... TCATGCGTAGTCACATGGAAAAGTTTCCGG 151314 36 88.9 0 ................................AAGT | ========== ====== ====== ====== ==================================== ============================== ================== 9 36 98.8 30 GCTTTAGATGGATGTTAAATCAATGATGTAATTTTC # Left flank : CATTATCCAAGCACCACCTTTCC # Right flank : CGGTTGCAATTGGCAGCCGGCTTTTCCTTTGCTAGTGTTTGCAGCAAAATTATGCAGAGGAGTATGCATAAAACGTTTATAAAATAGTGAGCAAGCATCATGATATTTGTGATAAATAGTCGATTCAATTTTAAATGTATTTTTAATTTAAAATAAAATACGATTACTATTATTGAATCATGACATCATCTTATAATTTGATAATGGCTGTTTTAAAAATATTAAAAATAAACGTCGAATTTTACTTTTATCAAAGAAAAAGCAAAAATTTTGATTGATATAAACGCTGATAGCAAGGGATTTATAATTTTTTGTGAAAAATGTTCATTAAAAGTCACTTGTAATTATGCATAAAAGCGCTATCATATCCTATGAGGGCTGAAGTAGAGAGTGGCCTGAGATAAAACATCAATTGAGACCGCTGTTGAGTACAGGCGGGATGATTTTTAAAGGATGGAAGGAAGATTAAGATGGCAAAAATGATCAGTGGCTCCGATGCA # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGATGGATGTTAAATCAATGATGTAATTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 1293-3 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABFNH010000066.1 Limosilactobacillus mucosae strain INIA P508 isolate INIA P508, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1292 36 100.0 30 .................................... TAACGTCGTGGCGAATCTGATCCAAAGCAA 1226 36 100.0 30 .................................... CGTACCAGCTGATTTTATGAATAAGCGCCC 1160 36 100.0 30 .................................... AGGCCTGGCCAAAAATCAAGCGTGGCGCAT 1094 36 100.0 30 .................................... CTTAAGGCTTGCCGCCGAGCCAGTCTTAAA 1028 36 100.0 30 .................................... TCGCTCACCGGAAGACGCGGTCAAGATCGT 962 36 100.0 30 .................................... CTTTGTCAGCTTCGTTGATGTCAGCCATTG 896 36 100.0 30 .................................... CCTTTTCGTTGTAGTAGTAGCGATCACCAC 830 36 100.0 30 .................................... CCACGACTAGAAACCTGCTACGAACAGGTG 764 36 100.0 30 .................................... TGACAACCGTGATGGTCAAGACTTTATCCC 698 36 100.0 30 .................................... GCTAGTCCTCGACAGCGTGGAAGCATGGTC 632 36 100.0 30 .................................... TTGCGCAACTGGTTAACGGGGCCGTTCTGG 566 36 100.0 30 .................................... ACGTTGAACGCCTGCAGGGGGAAATTGACA 500 36 100.0 30 .................................... AACTGCCATTATCCAAGCACCACCTTTCCG 434 36 100.0 30 .................................... TTTAGCACCTTTCATATTAGCTACAATTGA 368 36 100.0 30 .................................... TGGGTTGACGTGTTGTTGTTGATTGAAGGA 302 36 100.0 30 .................................... TACGTTCCGCCCTGCGATCCAAAGCGCCCC 236 36 100.0 30 .................................... TCGATCATTGGGAAGTAAGCGCCAATCTGG 170 36 100.0 30 .................................... GTAGGTGGTCAATATTCTGATGCTACAATG 104 36 100.0 30 .................................... TACGTCAAAGTTATCCCCAGTACTGCCACT 38 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 100.0 30 GCTTTAGATGGATGTTAAATCAATGATGTAATTTTC # Left flank : TGGATTGATGAAGATTTCGTTGATTGGCATCTCTAAATCGTTAGTTTTTGATTAGAAAACAAC # Right flank : CAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGATGGATGTTAAATCAATGATGTAATTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [3.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //