Array 1 69612-68105 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCTH01000024.1 Bacteroides uniformis strain BIOML-A1 scaffold24_size69718, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 69611 47 100.0 30 ............................................... TCAAGTCCTTTCTTAGATATACCTATATGA 69534 47 100.0 30 ............................................... GTGCTGCCTATTCAAATATTCTTCCTTCCA 69457 47 100.0 30 ............................................... AAGCCGTCCGCATCGTACAGTCTCACGGCA 69380 47 100.0 30 ............................................... CCAAAAGCTCGTCACGCTTGTTGTAGTGCT 69303 47 100.0 30 ............................................... TCTATGGTCCTTATTGAAGGAAGGCGAAAA 69226 47 100.0 30 ............................................... GCGGTTGGCAGTTACCTAAAGACAGCGATT 69149 47 100.0 29 ............................................... TATATCGTTCGCTGAGAATTGAATATTCT 69073 47 100.0 30 ............................................... AAATGAACATTATGGCGAAGAAGCCATTCG 68996 47 100.0 30 ............................................... GTTAATTTTTATAATCTCGCCACAAAAATA 68919 47 100.0 30 ............................................... CGTGTCGGTGTCCCACACATAGCCACACAA 68842 47 100.0 30 ............................................... CTTGAATAATTCTAAGCTTTTTAAATTTCA 68765 47 100.0 30 ............................................... GCCGTACAGAAAAAACGCATAGGACTTATA 68688 47 100.0 29 ............................................... AACATATTACAAGTAAGAGCAACAAAAAA 68612 47 100.0 30 ............................................... GCAATTCAACGCCCGGCTGTATAGGCAGGG 68535 47 100.0 30 ............................................... GCCGGGCATATACCGCCCGATACGATTCGA 68458 47 100.0 29 ............................................... AATCTCTTTCGCGTAATCAATAACGAATT 68382 47 100.0 30 ............................................... CCGTTTTTGTTTGTAAATTTGTATTGTTTA 68305 47 100.0 30 ............................................... GATGACCGTCGTAACCGACGGAATCGACGG 68228 47 100.0 30 ............................................... TGATACACAATATAGGGCATTTTCCATATT 68151 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 20 47 100.0 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Left flank : TTTGTTCGGTTAAACATACCCATGGGTGGGGCACTTTTTAAATGTTGTTCCGGGTCCCTTTTCAAGTGTTAGCTACAAACTTACGCATTTTTAATTACATTATTTA # Right flank : TGATTACAAGTAACAATCTAATATTCAAACGATTACACATAGTGTTAGAATATAAAAAAAGAATGCTGCTTCTAAAAAAATCCCGCCATTGCGCGGGATTTTTTTAGAATAATTCTAATTGTTGTCCAGGCGTATTCACATCCACAGTCTTTTTCCCATAAAAAAGTGCTATATTTCCAAATTGCTTGTCCGTAATGCACATAATTCCGACACTTCCATAGTCCGGTAAGAAAGATTTAACTCTTTTTATATGTACCTCCGCATTCTCACAACTCGCACAATGACGAACATATATAGAGAACTGGAACATCGTAAATCCATCCTTTTGCAGATTTTTTCTAAATTCCGCATACGCCTTTTTATCCTTCTTGGTTTCGGTAGGCAAATCAAACAACACTAATACCCACATAATGCGATATTCACTAAACCGGTCCATCACATCTCTGGATAGGATATTTTACGCAACTCACCACTGAAACATTTATACAGAGAAGCCGTAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 366-88 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCTH01000006.1 Bacteroides uniformis strain BIOML-A1 scaffold6_size193901, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 365 47 93.6 30 ....................GCT........................ AAGCCGTCCGCATCGTACAGTCTCACGGCA 288 47 100.0 30 ............................................... TTTTTTGCCATCATTTTCTCACCAAGTTGT 211 47 100.0 30 ............................................... CCCTTCGCAGGTATTCGTTATGTTCATCCT 134 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 4 47 98.4 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Left flank : TGTTCTGTATGGCAGGGCCTGCTTTCCATATTTCGTCCAGAAACACGACATCGGCTGTGGGCAGATAGCCGTCGATGGCACGTTCGTACTTATCGGATTCTTTCAGCCGGCTGATGCTGACGGGACCGAATATCTCGTCGGGTGTAGAGAATCGGGACATCAGGTATTCGAAGGCACGGGCATCTGTAAAAGCAGACTTTAGCCGCCTGGCTACCATTGACTTGGCTACTCCCGGAGGCCCCAGGAGCAGGATGCTCTCACCTGCCAGGGCTGCCAGCAGGGAGAGGTTTATTTCGGTTTCTTTTTCGTATACTCCCCGGTTCATTTCGGAAAGGAGGAGGCGGATGCGTTGGATCATTTCCACAATATGATTTATTTATAGTCAGTACTCATGTATAAAGAAAAGTGTGTAAAGATACCAAATAGTAGCGAAATCAGAGAGATTCTTATTAAGATTCACTATCTTTGGAAAACAAATACACACAGACACGCACACACAC # Right flank : CAACTTACGCATGTAGCTAACACTTGAAAAGGGACCCGGGTAGCATTTGAAACGTGTACCACCCGATAGGTTTTGCAAAGTTAATTAA # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //