Array 1 229490-230905 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANEF01000033.1 Streptococcus agalactiae BSU174 ctg120001216180, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 229490 36 100.0 30 .................................... AATGGTGGCTAACATCAGTGACGAATCGTT 229556 36 100.0 30 .................................... CCTGAAATTGGCTGATATTTTTGATGAGTT 229622 36 100.0 30 .................................... TCCCAAATTTGTAACTCCCAAGGATAGTAG 229688 36 100.0 29 .................................... CCGATTATTTCCTACATAATACGCACGTT 229753 36 100.0 30 .................................... GAGGTGATATTTTTATTTGGGGTAAACGTG 229819 36 100.0 25 .................................... TTACAACAGTTACATAAAATGGGTA 229880 36 100.0 30 .................................... TTTGATAGTGGTGTGGTTGTTATCAGGCAT 229946 36 100.0 30 .................................... TCTACCCACCTCCCAAGCTGAAATGGCTGT 230012 36 100.0 30 .................................... GGTGAGGGTGCGTAGGATAGCTGACAAACT 230078 36 100.0 30 .................................... TTATCATGATGAGGAACAATCAATTGATCA 230144 36 100.0 30 .................................... TTCCTTAAAAACAAAAACAGCACCCACATT 230210 36 100.0 30 .................................... TATTATCAAAATATTCTTTGGCGAATTCAT 230276 36 100.0 30 .................................... CATTACAGTCTTTGAGCAAGGTTATATGCT 230342 36 100.0 30 .................................... AGCTATTGCTCAAAAAAGAGTAACAGCTCA 230408 36 100.0 30 .................................... TTTTTCTATTTTATTTATTTCAATAGCATC 230474 36 100.0 30 .................................... CAGGAGATCTATAACACTGAGTTCATTCTA 230540 36 100.0 30 .................................... AAAACAATTGAAGAGCTGGAGAATTACACT 230606 36 100.0 30 .................................... TTGGAAAAAACACGAAAGTGATATTACTTT 230672 36 100.0 30 .................................... AAGACTTAAAATCGATTAGAATTGATTTTA 230738 36 100.0 30 .................................... TTACAACAGTTACATAGCCAGGGCCTGCTC 230804 36 100.0 30 .................................... TCTTCTTTTTAATTCTTCTAACACTCCATC 230870 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CATCTTCTTTTGACCTAACAAAAGGATATGTGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //