Array 1 74741-75075 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIPG01000009.1 Streptomyces sp. CB02058 scaffold9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 74741 29 100.0 32 ............................. CAGGCCGCGTGCGCCGAAGCGCTCATCTGCAT 74802 29 100.0 32 ............................. ACGGCTGCGCCCCGGACCAGGGCCGGTCCGGG 74863 29 100.0 32 ............................. GCGGTCGACCACTGGACCAAGGCCGGCATGTC 74924 29 89.7 32 T............TT.............. GTCGGACTGTGACGCCGCCGGATGATCGATGG 74985 29 89.7 32 ...T.......A..T.............. AGCCTTTCCTTCTTGAGGTCGGTGCCCGCCCC 75046 29 82.8 0 ............T.T..A...C......T | C [75071] ========== ====== ====== ====== ============================= ================================ ================== 6 29 93.7 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : CACAGGCGGATCGCCTGGGCGATGCCTTGGTTGAAGGGGATGCCGCGTTGCTTGCAGTCGTCCTTGAACTCCCCGTACAGCCCCGTGGGGAGATAGGTGGAGAACGAACTGCCGCCCGTGGTGTCCACGGGGACGCGCTCGACGTCATCTGCTCGCCATGCCTGCACGCCTTCGGTCACGGCGTCCTTGATGTCGACGCCGAACTCGGCTGCTCTGACCTTGAGTTCTTGACGCAAGGCCGCCGGCAACTTGGCGACTACCTTTTCCCTGTCATCGGGGGAGTATGGGACGGTCATGCGGTTACCTTACTCACTCGGGTGGGATGTGTGTCGCAGGCGGGGTCGGAAATCTGCGGCGTGTCACCCGGATGGGGGAGGGATGCTGAGGTGGATCGCCAATGTGGAGCACTGGGTGAATTGGGGCTTGGGTGAGCAATGTCGGATTCAGTGAAAGTGCATCAGAACAGGCCTGACCGCTGATAGAACAGCAGGTCAGTGAGT # Right flank : TCTTGTTGTCCGCGGACAACAAGAGGCTGACCCGACCCGCTGGGCGGGGTCGGCAGCGTGCCGCAGGCGGCGCGTCGTAGCTGGTTGGCTGAGACGTCGAGCCTGGCCGCTGTCGCGACGCGGAACGTGCCGGGCAGCCAGGCGCTTGAGGCAGCGGCTGCGGAGTTCACCGGCCAGCTCCCCGATGCCCGTGAGGCAGGTTTCGCCGGTGGCGCGTCCTGGTCAGTTGCTCCAGCGAGCCACGATGGCGTGATCGACGCGGAAGAGCGCGTCGCACTCCGCGCAGTACGCACTGCCGAAGACGTAGGTCAGATTGCTTGCCACCTCGTGCTGGCCGTCGGCGAGAGCACGAGCGTGGAGGCGCCGGGCCAGCCCTTCCAAGGAGGCGACGGCCGCGGGCCGCAACTCCCTGCGGTGCCCAGCAGTCTCTTTCATGTAGAAGGCGTCGGTCGTCGAGAAGTAGCCGTACTCGCCGAACACCACGAAGTTCTCGGCCTCGC # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 106102-106551 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIPG01000009.1 Streptomyces sp. CB02058 scaffold9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 106102 29 100.0 32 ............................. GGAACGCGCGGCTAGCTGCCGACGCGAACGGA 106163 29 100.0 32 ............................. AAGGCGGGCGAGCTCAGCGGGTCAACTGGCGT 106224 29 100.0 32 ............................. GACACCAGGCGGTCGGCAACGATCACGAGCTC 106285 29 96.6 32 .........................T... ACGACGGCGCTCTCCATACACATCAGCCCGGC 106346 29 96.6 32 .............C............... ATGCAGCGCATCATCATCGCGGGTGCCAAGCA 106407 29 79.3 32 ........T..CTC...A.......T... AAGGACAAGATGCTGCTGGCCGTCCATATGCG 106468 29 82.8 26 ...........C.CT..........T..T CGGAGGTGTAGTGGTGCTGCCGTCAC 106523 29 86.2 0 ..........T..TT...........T.. | ========== ====== ====== ====== ============================= ================================ ================== 8 29 92.7 31 GTGCTCCCCGCGCACGCGGGGATGGCCCC # Left flank : CCCAGAACGGGTGGGTCGCCACCTGGGTACTCAGCTCGAGGAGCTCGGCCCGGAACCGCGCGACCTTCTGGCGCTGCTCGTCGGTGTAGCCGGGGCTGTCGGGCTTGGCGGACCGGTACCCGCTGTGCAGCTGCTTGTCACCTTCCCAGCCGGGCATCGGCTCGGCCGACCACGGCAGGGTCCGGGCGTACCGCTCGTAGGCGGCGCGGGTCTGGTGGAGGGCGAGCTGGGCGTCGCACAGGTCCTGGGGGAAGGTGTAGGTCGGCACGCCAAAATAATACGTCTGTTCGAATTACGTGTGCGAGTCCAACGCCGCCGACCGGCTCGCGTTCCATCCGATCGGCCCACCGCGCGCCGGCGTCGTGGGCCGCGGCTGTCCTCGCGTGGTAGCGCCGATGCATCCTTGAGGTGGCTTCTGGGTTGGAATGTGAGCTTTGCCGGAATCGATGAAAGTTATGCAGAACGGCGCTCGCGGGTGACAAACTCGCAGTTCAGCGAGA # Right flank : CTCACCGAACCGAAGCGTCGGGGTGAACCGCTGCTGTTCCCCGTGCCGCGGGCTGCCCCCGGAGCCGTTCGGCATGGCCAGGCGCTCCTCGCTGAAGCCGAACTCGCCCCCCACCCCGTCGTGCAGGTCGTCCAGCGAGCCGTCCCCCGCCTCGGTGGAGATGGCAAGGGCACGTTGCGCCCAGGACATGTCCCCGAGGGGGCCCGTACGCGCGGGCCTCGATGGCTGCGAGGCGACGGCGGGCGACGTCGCCGAGTCCGGGCAGCATGGCGGCCCGCCGGGCGTACTGCGCCGCGTCGGCGGGGCGGCCGGAGAAGTAGGAGATGTAGGCGAGTGTGCCGTCGTGTAGGCGCGCAGCGGCTCGAACCGTGCGGTCTCGCTGTACAGAGCGGCCGACCGCGCGAGGCGTGTGGCGCCGTCGAACGAGCCCCGAGCCCAGATCGAACACAGCCGTGGCGAGAACGGCGCATGCCTGCCCGGCAAGGAGGAGGTCATCACCT # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGATGGCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //