Array 1 51319-52740 **** Predicted by CRISPRDetect 2.4 *** >NZ_NWYP01000005.1 Neisseria meningitidis strain INS-Nm971 NODE_5_length_72329_cov_98.0048, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 51319 36 94.4 30 ........G...A....................... TTCTATTATAAAAGCTGCCTGACTTACTCG 51385 36 100.0 30 .................................... GGCGGATGGCATACGGCGTGCCTTTTCGGT 51451 36 100.0 30 .................................... GAGCATTGACACTATTTGTATGGCGTTAAG 51517 36 100.0 30 .................................... CCGTCACTACACGAACTGGCGGACTTCTTG 51583 36 100.0 30 .................................... AGCATTTGGGCGGCACGGGCAAAGCCGTCA 51649 36 100.0 30 .................................... AATCAGACCGACTTTACAACGAAGGTTTGA 51715 36 100.0 30 .................................... CGACAACAAAGCCGTCTATGACCTGACCGA 51781 36 100.0 30 .................................... TTGGGAGGTGGAAAACCGAATCCTGCACGA 51847 36 100.0 30 .................................... AAGCAAATCATTTTCATAGTCAGCAGCTTC 51913 36 97.2 30 ......................T............. ACGTGAGTTTGTCTATGAGTTCGACGGCGT 51979 36 100.0 30 .................................... TGAGAAAGATTTAAGAACTAAGTTCCCATC 52045 36 100.0 30 .................................... CTTTCACTTCAGTAATGGCTTCGGCATATA 52111 36 100.0 30 .................................... TAAATTTTTGATTTTGATTTTTTCTATACA 52177 36 100.0 30 .................................... GTGGGAGTTCGTCTATGAATTCGATGGCGT 52243 36 100.0 30 .................................... TTTGCTGCCCGACAATGCGCGTCCGCAGAT 52309 36 100.0 30 .................................... TGAGAAAGATTTAAGAACTAAGTTCCCATC 52375 36 100.0 30 .................................... TTCCAAAGTTTTAATTTATATTATTTTAGT 52441 36 97.2 30 ............................A....... CAGAAGATGATAACTGTGCTGGGGGTGCGT 52507 36 100.0 30 .................................... ACGCAATAACGGCGAGTTTACGCATCAATG 52573 36 100.0 30 .................................... TAACGATTGAAAGTGAGTATGTATTAAGTA 52639 36 100.0 30 .................................... TAACGATTGAAAGTGAGTATGTATTAAGTA 52705 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 99.5 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGATATTGTGCTAGAAGAAACAGAAAACGAGCAGAACAATGATTTCAGGCTGCCTGAAAATTTAGAACACTTTGATATTCAAATAGAAAATGTTTCTTTTCGCTATGCTGAAAATGAACCATACATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGATTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : TACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTGTCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACATAGTCTATTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : NA //