Array 1 6449100-6446316 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023865.1 Actinoplanes teichomyceticus ATCC 31121 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 6449099 30 100.0 31 .............................. ACAGCGCGCAGCTGGGCGTCACGGTGGCCCG 6449038 30 96.7 32 .............................T TCACCGTCCCGACCGAGCTGAAGGCCCGGCTG 6448976 30 96.7 31 .............................C GGCGCATCGTGCGCCGGCCGACGGGCCCGGC 6448915 30 100.0 31 .............................. GCTCGGCGAGGGCCTTGTGTATGGCGTCGAT 6448854 30 96.7 31 .............................C TTCTTGACCAGGACGCCGACATGGACTTCGG 6448793 30 96.7 31 .............................A AGACGCCGTACGTCTGCAACTCGGGGCCGTG 6448732 30 96.7 31 .............................A AGACGCCGTACGTCTGCAACTCGGGGCCGTG 6448671 30 96.7 31 .............................A GCGCAGACGCGGCACGGGAGTTCCTGGACAA 6448610 30 96.7 31 .............................C GGGACTTCTCGCACCTGGTCGGCGCGGAGCT 6448549 30 96.7 31 .............................A GCGACGTGTGGCGTGCCACGTTCTAGATAAG 6448488 30 100.0 31 .............................. GCACGCTCGCCGAGCGGATCACGGAGTGGTC 6448427 30 96.7 31 .............................C TGAAGGAGAAGCTGGCCGGCTGGAAGTGGTC 6448366 30 100.0 31 .............................. ACCGGGGCGTCGCGCGCAACATCGCGGGCAC 6448305 30 96.7 31 .............................A GGCTGAGGTCGGCTCCGCACGGTCCGAGGTA 6448244 30 96.7 31 .............................A AAAAGCTCGCGCCGAGCCGGGCGGCGGGGAC 6448183 30 96.7 31 .............................C CGTTCGAGGCGGCAGCGAAGCGGTACGAGCA 6448122 30 96.7 31 .............................C CGGGCGACACCCTCGCTGCGTTCACCCGGTG 6448061 30 96.7 31 .............................T GGTGCTGACGGACGCTCTAGTGCGGGCCGGG 6448000 30 96.7 31 .............................A GCCAGGCCCGGCCGGGCGGGAGTTGCTGCAG 6447939 30 100.0 32 .............................. GCGCCAAGCGGCGGCCGCCGCGGTGGTCGAGA 6447877 30 100.0 31 .............................. TTCCGCGGGCCGGTGGAAGCCGTGTTGTCGT 6447816 30 96.7 31 .............................T GGGCCTGGACGTACGCCTCCAGGCCCTCATA 6447755 30 96.7 31 .............................C ATTGCCTGGGTGCGGATCTCCTGGGACAGCC 6447694 30 100.0 31 .............................. ATGACCGATCAGAAAGCCCCCGACGGTCCGA 6447633 30 96.7 31 .............................A AGGACGCGATGGGTGAGTTCGAGGCTCACAT 6447572 30 100.0 31 .............................. CGTCGGCCAGGTCCCCGACCGTCCGGAACGC 6447511 30 96.7 31 .............................A CCACGCAGTACTGGAACCGGTCGGACTACAC 6447450 30 96.7 31 .............................T GACGTTCGACCCTTACCCGAACGACACGCCT 6447389 30 100.0 31 .............................. GGCGGGCGAACCGGGGGGCGTTGCGGCGCGG 6447328 30 100.0 31 .............................. CGTACCGGGCACGCCACGGCCGGGCCCCGAT 6447267 30 93.3 31 ............................TC GTGCGACGAGACGCAGCGATGACCAGGACTT 6447206 30 96.7 31 .............................C AGGTGGGCTAGCACCGCCGAGATCGCGAAAA 6447145 29 93.3 31 ........T............-........ CAATGCCACACGCCAACCCCGGGCCGCGGTC 6447085 30 96.7 32 .............................T GCGCCGCCAGCTCCGGGTCGGCCATCGCGGTC 6447023 30 96.7 31 .............................C CGAAGACGGCGAACACTCTGTACGCCCAGCT 6446962 30 100.0 31 .............................. CCGGCCGAGGGTTGCCTACTGCTCCTCGTCG 6446901 30 93.3 31 ....A........................T ACAAGTGGCTCATCATCGGCGGCGTGCTCGG 6446840 30 100.0 31 .............................. ACATCCAGAAGGTCATGGGCTGATGAATCTG 6446779 30 96.7 31 .............................C GATCAGCGTCCCGAACGGCGCGACTTTTCAG 6446718 30 96.7 31 ..........T................... TCGTGCAGCGCAACGCAGCCGGGGAAGCCGC 6446657 30 100.0 31 .............................. TCAACGCGGCGGCCGGGTGGTACGGGTCACC 6446596 30 96.7 31 .............................T GGCGCAGCAGCGGCGACGGCACGATCTCCAT 6446535 30 96.7 38 ............T................. GGCCGGCCGCGGACAGCTAGACATGCCCTGGGCCCCCG G [6446513] 6446466 30 93.3 31 ............A................T CCGCGCCGGCACCCGGGCCGCCGAGCCAGTC 6446405 29 93.3 31 .....................-.......A AGGGGGACGGGACGATGTCCATGTCCTGGTA 6446345 30 90.0 0 ..........G...........C......C | ========== ====== ====== ====== ============================== ====================================== ================== 46 30 97.1 31 GTGCTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : ACGAGGTCAACCTCTGGGACGAAAGTGGAGCCGACATACCGGCTGGCTTCAACCACGGGTCCGAGTACGAGGTCGATTTCTGATGACCGTCATCATCTTGACCTCGTGCCCGCCCGGCCTGCGCGGGCACCTGACCCAATGGTTACTCGAGATTTCCGCCGGCGTATACATCGGCCACGTCAATCCACGCATCCGCCGACGACTTTGGCACCGCGTCATCGAACTGTCCGGACCCGGTCGAGCGCTACTGGTCTACCAGCAGCCCGGCGAGCAACGACTGACCTTCGAAACGCACGATCACGACTGGGAGCCGGTCGACTTCGACGGCATCACCCTGATGCGACGTCCGACCCAACGTAGCACCTACAACCCAGCAGCCCCCCAAGGATGGAGCAGCGCTAGTAAACGGCGACGCTTCGCACGCCGATCCCCGAACACCTCCACCACACGGACTGAACAAATTCCGCCAAGTTGACCTATAGAATCCCAGGTCAGGAAGT # Right flank : ATTAATGACGAGCAGGCAGTGACAGTTTCGGGAGGTCATTAGTCGGCTGCCGCTCATCAGCATGATGGAAGGCCCTCACTGGGCAGATCCGTAAACTCGATCATGGATCGGGCAATCCATCTCGACTACGGTCGGTGACTGTGAGTCTGGCGGTGTTCCGCTGATGAGGGAGCAGCGCGGTAGTAAGGAGGCCTTGTCTGGACTGTCTTTCGGCGGTCTTGTGCCTCCGCGCTGCTCCCCACGAGGTGTCTTGCCGAGGTTCTGCGGGGAGCAGGCCTTCCCGGTTCGGCTGGCCGTCGGGCATCGGCCGAGGTGTCGCCGGTGGGGGAGCAGCGGAGGTCTTCCCGGTGAGCGTGTTTGTGCTGCTCAGTATCTGTTCTTGTTGGTTGTGGGGAGCACCGTGGCGATGAATTCCGCGTTTCTGGTGGGGGTCGTGCGGCGCTGCTCCCCAATCCGGGTGATCGGTGGGGAGCAGGTGGGGTGGTTACTGGCAGTGCTAG # Questionable array : NO Score: 5.47 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.36, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 6458602-6461748 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023865.1 Actinoplanes teichomyceticus ATCC 31121 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================= ================== 6458602 30 100.0 31 .............................. GGTAGACCCGCAGATGGTCACGATGAACAGA 6458663 30 96.7 31 .............................T GATCGAGGATGTTGCGGACGACGTGCAGCGC 6458724 30 100.0 31 .............................. CGGTCAGCACCAGCGGCGCCGGCCAGGCGAG 6458785 30 96.7 31 .............................A GGGCCAGGCACTCCACCGCCTCCGGTACCCA 6458846 30 100.0 31 .............................. CAGCAACGGCACCTACACGCTGGCCACCAAG 6458907 30 96.7 31 .............................T GCATCAGCGACACCGTCGGCGGCGTGCTCGG 6458968 30 96.7 32 .............................C CCGGCCACGGCGAGCTGTCCATCCGGGCGCTG 6459030 30 96.7 32 .............................A GCAGACCGTGGGCGGCCCTGGCTCGGGCGTAC 6459092 30 96.7 31 .............................C CGTCCGCCAGGAAGTTGTGCGGATCGTCGGC 6459153 30 96.7 31 .............................C ACGCCCTTGGGCGCCGGATCAGCTACAAGTA 6459214 30 96.7 31 .............................A GTGGCTTACGGTGGTCCCGGCCTACGGTTGT 6459275 30 100.0 31 .............................. CGGCAGCCAGTACGCCGATGAACGACATGAT 6459336 30 96.7 31 .............................T GGCTCAGCAGGATGAACGGCTCGCAGCCAGA 6459397 30 96.7 31 .............................T GTTTGGGATCGTTGATCCGGATCTTCATGCG 6459458 30 100.0 31 .............................. AGCGGATCCTGTCCCCTAGAACACGGCAGTG 6459519 30 96.7 32 .............................A GGCTCGCCGCGGTGTGCTCCCGCGGCTGTGGG 6459581 30 100.0 31 .............................. GAGCGCTGATCGCGGTAGCAACGGAGGCGTA 6459642 30 96.7 31 .............................A CCACGCTCAAGGACGTGCCCGGCGCGAACAT 6459703 30 100.0 31 .............................. ACGCGCCGAGCATCGCGGTCGGGATGATGCG 6459764 30 96.7 31 .............................T GAGAAACGGACGGGGCCGGCACGCCCATGCC 6459825 30 96.7 31 .............................C TGCCCTGTTCGCCGGGGTTGATGTTGAACCT 6459886 30 100.0 31 .............................. ACGATGCGGACGCTGGCGAGTGGGAGGACGA 6459947 30 100.0 31 .............................. GCTGGTCGCGGACATGCAGCGCGATGCGGAG 6460008 30 96.7 31 .............................C GCATCCCTCACCTCGGAGGTGTACTAGTGGG 6460069 30 96.7 31 .............................C GGCCGGCGACGGCCCGCTCGTCGCGGGTTTC 6460130 30 100.0 31 .............................. TCCCGCGGGCAAGACGCCAGATGCCGGACGC 6460191 30 96.7 31 .............................A ACCGCACGAACCCGAGGGCAAGGAATCCTTC 6460252 30 100.0 31 .............................. GGGTCGAGCAGGGTCGCCGGCCAGCGCACGA 6460313 30 100.0 31 .............................. TCCGAGCCAGCGCTCCCGCTCGGACCTGCCC 6460374 30 100.0 31 .............................. CGTTCGACTGCTCCGGGCTGATGCAGTGGAT 6460435 30 96.7 31 .............................T ACCCCGGGGCGTTCACCGGCGCCCTGCACGT 6460496 30 96.7 31 .............................T ACGTCGCGGGCGTGGCGGGCTGGTCGATTGA 6460557 30 100.0 32 .............................. GACAGCAGCGCCGCGAGCAGAGCGGTGGTGCC 6460619 30 100.0 31 .............................. GCACCACCGTCGACCTGTCCGGGATCGGGCT 6460680 30 96.7 31 .............................A CGCTGATCCTCGGCATCGTCGGTGCTGCAGG 6460741 30 100.0 33 .............................. GGCTTGGGCTGCGCGGGCAACCGAACCCCTGGT 6460804 30 86.7 29 .CC.C........................C TGTTCGATAAACCGAACAGTCAGGAGATC 6460863 30 100.0 31 .............................. CGGCCTTGTCGGTCACCGGGTTGTGGTAGGT 6460924 30 96.7 31 .............................C GGTGGTCGACGGCCTTACGGCCGGAGTGACA 6460985 30 96.7 31 .............................T CGACCCGGCGTCAGGCCCGGACGCCCCCCGT 6461046 30 96.7 31 .............................A CGAGGTCGCCGGGGCGGGGGTCGGTGATGGG 6461107 30 100.0 31 .............................. GGGTCGACTTTGAAGGGTCGATGACCGGCAA 6461168 30 100.0 31 .............................. GGTTGGCCGCCGGGCAGTCCGGGCAGTCGTT 6461229 30 96.7 32 .............................C GGATGATCCGGAAGATCACCGATCCGCAGGGC 6461291 30 100.0 32 .............................. CCATGACGCGCCACCGGTACGACTGCCCGCCG 6461353 30 96.7 31 .............................A CCCGTGACACCGCGCGCAGCTCGGCGATCAC 6461414 30 96.7 31 .............................A TCAAGCAGGACGCGAAGAAGCGGATCGGCTA 6461475 30 93.3 31 .............G...............C CGGGCACCGTCACCGCGGTCGCGGCGCCGGC 6461536 30 96.7 31 .............................T GCGGGTCACCGGCGAGACTTTGAAACTCGTC 6461597 30 96.7 31 .............................A GCTCGGCATCGTCATGTCGGTGCTGGAGATC 6461658 30 93.3 31 ..........A..................C ACTGGTCGCGCACCCTCAACGGCGCCGGTCG 6461719 30 93.3 0 .......T.....................C | ========== ====== ====== ====== ============================== ================================= ================== 52 30 97.6 31 GTGCTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : CCGGTGTGGCCTTGCCGATGTCGTGGACACCCGCCAACCATTGAACGAGAACCCGGCCATCCGCAGCACCTAAAGGCATCTCGTCGGCGATTCGCTGACGAACCGCCATGGGCAGCCACTCATCCCACAGCGACCCCGCAACCTCGGCCGCATCGGCAAGATGCCTCCACAACGGAAGCGGCTGCACCTGGTCCCCCGACTTACCCCAGACCGTCCGCGCTGCGGAACTCAATTCGGAAGCGATGTCCACGGCTGCGGATTCAAGCACGGAGGTATGACGGTTCCCCAGACGACCGAGGCGCGCCTTCTACCCGTATAAGCAAATAGTTACTTTCTGTCGGTATCGATACTTCTTCCAGGTGACGTAACATGCGTTGGTCTCAGGGGCAAGCTCGTCGGCGGTAGGAGGGAGGGGAGCCATCACGCCCTATGTCGCCTCTAACGGGAAACGAGTGAATAAAAACAACACTCAGGCACTACATTCCCGCAGGTCAGGAAGT # Right flank : CGGTACACCCGGGCGTGGCTCACGCCTCCGCCGTTTTTGGGCCACGACCGCCCGCCGGCCCCGGTGACCACGCCAGCCCCCGCGTCGACGCGTTCGGCACCACCACCGTCGCCATGTACCGCATCAGCGTCGACGCCGCCCTCGGCGACACCGGCACTGCCCTGCAGCACGCTGCCAGCGTCAACTCTGCTGCTCAATTTTTTTGGTCAGAGGATGGTCCACGCGGTGAGCTCGCGGCTCCCTCGCCGTAGGCCTGCAATACGGCGGTGCACCTCTGCCGCTGCCGGTGTGCCTGGCAAGGACTTGCGTGCATTGGTAGTAATCATCTGCAGCTCACGGAGCTGACACAGGTCCTCGAACTCAGCCCAGTGTCGAGGGTCCCAGCCGTAGGTTTGAACGAAGGCGTCGAATCCGTGATCATTGCCGAATCGGCGGCAGTGCACAGCTACCGTGGCGACATCCCAGACGCGGTCGCCGATGCGGGCGCCGTCCCAGTCCGC # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.52, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //